Ostrea edulis (European flat oyster): 125668578
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Entry
125668578 CDS
T09123
Name
(RefSeq) WD repeat-containing protein 18-like isoform X2
KO
K14829
pre-rRNA-processing protein IPI3
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125668578
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
125668578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
125668578
NCBI-ProteinID:
XP_048758820
LinkDB
All DBs
Position
4:91460103..91483175
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AA seq
438 aa
AA seq
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MTSNEVLLTSETTGQLWNVCVWDVESGTSIVTYKGGTSVPRGLAVLGQQYLVSASPTKPV
LTLWPLHKRDTTCIKMVCPGNVTALDITEDGDYCVAAIAEKIYIWQTCTGRLLCVLSRHY
QTVTCLRCSSGLIVSGGEDSLVIVWSLGKALCEQSQSRTPVSPDQVWSSHSLPVTDLHIG
VGGHLARVVSSSLDQTCRLYDVNSGEVLCTFVFEVAICSVVLDSAEFRLFAGSSTGSIYA
VNLFETPVRRERHITEDKACQRFDGHEKQVSCLCVSMDGCQLVSGSNDHNVKIWDVFSGQ
CLRTIEHKGPLTNALLTMVPPGIANPDIKSKLPLQTFQRVFHLDSQEENSKVDLNVLLRG
ANDEPEEVEDILKPNSEILLDLNYRTKDTENMDVDHASLQEVPKRTIISDDSELLKLKNA
NKELFHFAVSSLLQNKDK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaacgaagttttattgacaagcgagaccacgggacagctgtggaatgtctgt
gtttgggacgtggagtcgggaaccagtatcgtgacgtataaaggcggtacaagtgtcccc
cgtggcctggccgtattaggacaacagtaccttgtcagtgcatctcccacaaaaccagtg
ttaacattgtggcctctacataaaagggacaccacgtgtattaagatggtgtgtccaggg
aatgtgacggccctggacatcacggaggatggggattactgtgtagcagccatcgctgag
aaaatctacatatggcagacgtgtacaggacgcctgctttgtgtgttaagcagacattat
cagactgtcacctgcttgaggtgttcctcgggtttgattgtgtcggggggagaggacagt
ctcgtcatcgtctggtcattaggaaaagccttgtgtgaacagtcacaaagcaggaccccg
gtgtcacctgatcaggtgtggtccagtcactccctgccagttacagacctccatattggg
gtggggggacacctggccagagttgtctcctcctccctggatcagacttgtaggctgtat
gatgttaacagcggggaagtgctgtgtacatttgtgtttgaggtggccatatgttctgtg
gtactggattcagcagaattccgcttatttgcagggagcagtactggttcaatatatgca
gtcaatttatttgagacaccagtgagaagagagaggcacataacggaagacaaagcctgt
caacggtttgatggtcatgaaaaacaggtgagctgtctgtgtgtttcaatggatggatgc
caacttgtgtcggggtcaaatgaccacaatgtgaaaatctgggatgtcttcagtggacag
tgtttgagaactatagaacacaaagggccactgacaaacgcattactgactatggtacct
cctggtattgcgaaccccgacatcaaaagtaagctccccctccagacattccagagggtg
ttccacttggactcccaggaggagaatagcaaggtggatctgaacgtccttctccgcgga
gctaacgatgaaccagaggaagtagaggatatcctgaaacctaattcagagatacttttg
gatctcaattacagaacaaaagatactgagaacatggacgtggaccatgcctctttacag
gaagtgccaaaaaggacaattatttcagatgattcagaacttttaaaactaaaaaatgca
aacaaagaattatttcattttgcagttagtagtcttttgcagaataaagataaataa
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