Ostrea edulis (European flat oyster): 125668584
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Entry
125668584 CDS
T09123
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X2
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125668584
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125668584
TFIIIC, fungi type
125668584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_1
TPR_2
TPR_14
TPR_16
TPR_11
TPR_12
TPR_19
TPR_6
TPR_CcmH_CycH
TPR_9
ARM_TT21_5th
ANAPC3
TPR_EMC2
ARM_TT21
T7SS_EccA1_N
DUF6880
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
125668584
NCBI-ProteinID:
XP_048758832
LinkDB
All DBs
Position
4:91662523..91702416
Genome browser
AA seq
949 aa
AA seq
DB search
MQSVNMAGNEKKDIELTFEIAGNEDSQVSDEPLTYIIETIGSSSSNEVNMETNDSHSENV
QFVEVPADQLANLGLLATISSDQSRDDSNQIIQLTAADDLQNISIATEPGTSGFQLVQGG
GESDFVMPGIEPTLQYLTGKISFAEFSQLMESGEPDATVELDNVIQTIEVTDVVTDVKMP
EEDAQEEEEEPEDSTSQSEDTDSLSPKKKTRKRKKKYNDLPIHLEGMMGEANLKFAKGDH
EEAISICMEIIRMAPEAYMPFQTLGMIYEDQGDLKKSLQYSLIAAYLNPVDRDGWIRLAE
LSLELQDKQQAIICYSKAIRADPQNPSNLDIFWNRSHLYEELGEKKRALEGYKAMMKIAP
PKDGDRYMELARTITKHYYEEDDKVSAMETMKNAFESNSENVTAEDVNLIMELLMTQKMF
LQAIEVLVNHCGVVFNLNINREWSKDVALNTSLIENGAVKIVSVAIPELLPIDLRVKLGI
CLIQNKLNGIAQVVVTPLFNEDMEEVGDLYLDVAEAYMDQEYFAEAKSILQQLVHSENFN
LAAVWLRLAECLNSLGELEGAVDAYSKVVEMAPSHIGARMSLSTLQQHLGKHEEALKVLQ
RDESDGLLTKQEKSLLMHKCMLLHAQGKFDEFQDTCKSLLFNMFKNLNDPDFIKAVYCCR
SYKTRRELLQEHFKQGYKESTKSEIPVDDLWDLFVKLCEMLLNNKKYEDLLQVTALGMSC
PYFMLEPRKLKQTEFMCLIACLLTKNESFAFSHVREICIKEGNKNQVWNLLNQVLLIATE
NRHNRFYLRYLLNNPDHVPVELINGHNAALSGTYKYALGEYVAVLRHCPEDPLVNLCIGL
TFIHLAGQKFSSKKHSLFCQGLTFLNNYTELRGECQETYYNMGRALHQLGLTYAAVHYYK
KGLSYPPVVEDEENRFDLTRQLAYNLMLIYKNSGSDALARQIMHQYLVI
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgtaaacatggcagggaatgagaaaaaagatattgaacttacttttgaaata
gctggaaatgaagactcgcaagtgtctgatgaaccactaacttatatcattgaaactatt
ggcagcagcagcagcaacgaagtcaatatggaaaccaatgactcgcattcggagaatgta
cagtttgtagaagtaccagctgaccaactagctaacttaggactgctcgcaacaatatca
tctgaccaatctagagatgactctaatcaaattattcagttgaccgcagctgatgatcta
cagaacatcagtatagctacagaaccaggaacctctggatttcagttagtgcagggtgga
ggtgaaagtgatttcgttatgccgggaatagaaccaactctgcaatacttgacaggaaag
ataagttttgcagagttcagtcagctgatggaatctggagaacctgatgctactgttgaa
ctagataatgttatacagacaatagaagtaacagatgttgtgacagatgtaaaaatgcct
gaagaggatgcacaggaggaggaggaggagccagaggacagcaccagccaatcagaggac
accgatagcttatctcctaaaaagaaaacccgtaaaagaaaaaagaaatataatgattta
cccatacatctcgagggtatgatgggagaagctaatctcaaatttgcaaaaggagatcat
gaggaagccatttcaatttgcatggaaatcatcagaatggctcctgaggcatacatgcct
ttccagaccctgggcatgatttatgaagaccaaggggatctcaagaaatctcttcagtat
agtttaattgcggcctacttgaacccggtggaccgtgacggctggattagactggctgag
ctgagtctggagctgcaggacaaacagcaggccatcatctgttattctaaagcaatccga
gcggatcctcagaatcccagtaatcttgacatattctggaacagaagtcatttgtatgag
gagttaggggagaagaaaagagccctagagggatacaaagccatgatgaaaattgcaccc
ccgaaggatggagatcggtatatggaactcgctaggacaattacaaagcattattatgag
gaggatgataaagtgtctgccatggaaaccatgaagaatgcttttgaatccaattctgaa
aatgttactgcagaagatgtgaatttaattatggaactcttgatgactcagaaaatgttt
ctacaagctatagaggtgcttgtaaaccactgtggagtggtgtttaatttgaacatcaac
agagaatggagcaaggacgtagccttaaacacctcactgatagagaatggagccgtgaaa
atcgtttctgttgctatcccagaactgctccctattgacctaagagtcaaacttggaata
tgtttgatacagaataaattaaatggcatagcacaggttgttgtgacaccgctgtttaac
gaagatatggaggaagttggagatttatatttagatgtagctgaggcctatatggatcaa
gaatattttgcagaagctaaatcaattctccagcaattagtgcactctgaaaattttaat
ctggctgcggtgtggttgcgacttgcggagtgcctgaactccctaggagagttagaggga
gcagtggatgcttatagtaaggttgtggaaatggcaccctctcacatcggggctagaatg
tccctgtctacactgcagcaacaccttgggaagcatgaggaagcattaaaagtgttgcag
agagatgagtctgatggtttattaaccaaacaggagaaatctctgttgatgcacaagtgt
atgttgcttcacgcccagggaaaatttgatgagttccaagatacctgtaaatcattgctg
ttcaacatgttcaagaatttgaatgacccagacttcatcaaagctgtgtattgctgtaga
tcatataaaaccaggcgagaacttcttcaggagcatttcaaacaaggctataaagagagc
acaaaatctgagattcctgttgatgatttgtgggatttatttgtaaagctgtgtgagatg
ctgttaaacaataagaagtatgaagacctgctgcaagtcacagccctaggaatgtcttgc
ccgtatttcatgttagagccaaggaaattaaagcaaacagagttcatgtgtttgatagca
tgtctcctgaccaagaacgaatcctttgccttcagtcatgttagagaaatttgcataaag
gaaggaaacaagaatcaagtatggaatttactgaatcaagttttactgattgcaacagaa
aacagacacaatcggttttacctgcgatatctactgaataatcccgaccacgtaccagtt
gaattgataaatggccacaatgcagcattatcaggaacttacaagtatgctcttggagaa
tatgtggctgtactaagacactgtcctgaggacccccttgtcaacctctgtataggactg
acatttattcacttggcaggccagaagttttcttccaagaagcattctcttttctgtcag
ggtcttacttttttgaacaactacaccgaactgagaggtgaatgccaggaaacatactac
aacatgggcagagctttacatcagctaggattgacttatgcagctgtccactactacaaa
aaaggtctgtcatacccacctgtggtagaggatgaggagaaccggtttgatctaactcga
cagctggcttataacctgatgctgatctacaaaaacagcgggtcagacgccctggccagg
caaattatgcaccaatacctggttatctga
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