Ostrea edulis (European flat oyster): 125668799
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Entry
125668799 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125668799
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125668799
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125668799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_5
Baculo_IE-1
TRAF3_RING
zf-rbx1
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125668799
NCBI-ProteinID:
XP_048759176
LinkDB
All DBs
Position
4:15852489..15872450
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AA seq
254 aa
AA seq
DB search
MSYLRKTHIIEGFGDEVLYGIGAFLGILVPLVVYITNRSGDGVQNIHPDSEENVRSTRER
VQASTRVHTNPGETDCPVCLGNTRYGIETNCGHVFCGMCITTYWQHGTWLGAVRCPVCRQ
QVTLLLLHFTEEEHNQTSEEKREILHKIADYNRRFSGEPRPLMDYLRDLPTLLRHAFSEF
FSVGGLIWMFRLRVIAIFLAALFYFISPLDIIPEAVFGILGFLDDLFVLLLLAIYISIIY
RNYVQTRADDNTGN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatttaagaaaaactcacataattgaaggatttggagatgaagtgttatatgga
attggtgcatttctagggattcttgtaccattagttgtgtacattaccaacagaagtggt
gacggtgttcaaaatatacatccagacagcgaggaaaatgtgcgttccacacgagaacgt
gtacaagcctccacaagagttcacacgaaccctggagaaacagactgtcctgtgtgtcta
ggaaacacacgatacggaattgaaacaaactgtggacatgtgttttgtggtatgtgcatt
accacctactggcagcatggtacttggttaggagctgttcgctgtcctgtctgtaggcaa
caggtaactcttcttctcctacatttcactgaggaggaacacaaccaaacaagtgaagaa
aagagggagattctgcacaagattgcagactacaaccgacggttctcgggggaacccaga
ccgttgatggactatcttcgagacctgcctactctgcttcgccatgccttcagtgaattc
ttctctgttggaggcctgatatggatgttccgattacgagtaattgcaattttcctagca
gctctgttttattttatttcgcctttggatatcatcccagaagctgtgtttggaattctg
ggatttctggatgacttgtttgtactgctgttgttagccatttatatcagtattatatac
agaaattatgtacagacacgagccgatgacaatactggaaattaa
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integrated database retrieval system
