Ostrea edulis (European flat oyster): 125668966
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Entry
125668966 CDS
T09123
Name
(RefSeq) uncharacterized protein LOC125668966
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03440
Homologous recombination
oed03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125668966
03460 Fanconi anemia pathway
125668966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oed03032
]
125668966
03400 DNA repair and recombination proteins [BR:
oed03400
]
125668966
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125668966
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Topoisomerases
125668966
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
125668966
FA (Fanconi anemia) pathway
125668966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
TMC
Toprim
Zn_ribbon_GRF_2
Zn_ribbon_Top1
Motif
Other DBs
NCBI-GeneID:
125668966
NCBI-ProteinID:
XP_056017331
LinkDB
All DBs
Position
4:33178472..33269181
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AA seq
1960 aa
AA seq
DB search
MSFMLRKCFGLIFRNYCSHSSADMVKVLNVAEKNDAAKTLANVMSRGSARKREGFSKFNK
IYEFNYNILNKNCLMMMTSVSGHLLELDFIGQYRKWYSCNPLSLFDTPVEKKCPENYTDI
KRTLEREVRSSQYLIIWTDCDREGENIGFEVIQVCRAVNPNLPIYRARFSEITPQAVARA
CSNLVAPDKRVSDAVDVRQELDLRIGAAFTRFQTMRLQKIFPEALAEKLISYGSCQFPTL
GFVVERYKQVQAFIPEPFWKIKVTHIFDDATKCEFSWKRIRLFDHNACLVLYEQCTENPK
AKVIEVKCKPKSKWRPVPLDTVEMEKLASRKLRISAKETMRIAESLYTKGFISYPRTETN
MFPKDLDLVMLVDEQTRDPSWGGFARGILQDRPNPRNGNKTDQAHPPIHPIKYTDGLQGN
DARLYEFIVRHFLATCSKDAQGQETTVTIEIADEKFSVQGLMITARHYLDVYPYDRWNAK
TIPVYQEGDIFEPNAIDMLFSETSPPPLLTEADLISLMEKHGIGTDATHAEHIEKIKTRM
YVGVNNDNRFVPGQLGMGLVEGYDAMGYEMSKPQLRAELEADLKRICDGKKDKNLVLSQQ
VEKYKEVFKVACQQALKIDQALSQYLGEARDLPVEDALERLAAVPVKKCPNCGMDMALKT
RKTGGFYIGCLGFPSCRSAIWLPDFVLDASVSDVKCEDCQAQLMNFRFKMGSVPPMLPLE
YTGCVAGCDDLLSESLQINKSAPLSSQRPPQQMAGSQRLPQQAATSQNRQDQRSSWSDAQ
DSQRVPLMTVQPFNRQTNHQDSGHSGQDIVCNCGTNAILLTVKKEGPNQGRQFYKCGSSG
CNFFLWADESQNQLTTNNRRPPGGGGGFNNQNSDMELNCNCGAPAKLLRVTRDGPNKDRE
FYSCSKPRGQGCDFFQWADVSDENSGRNFGGGGFQGNQNVGNSDIQCKCADPAKMLTVNK
EGPNKGRPFYACAKPRGQGCDFFQWADVTDDSGGRHLGGGGFQGNQNVGNSDVQCKCGDP
AKMLTVNKEGPNKGRPFYACAKPRGQGCDFFQWGDENSKGGNPGIGENRKPSSEKKRTSS
VLDSGNTSNKKRAARKCGLCGEEGHTKRTCRKTSILQYVLRGYTEAMAEYRGGYGSSDRD
QHIPMQDRSHFNPAYRDDSLPHERDRVVVDMNGIHLDERRGSDGSREFRPDESTRRKWAA
NSDFRDTADLIQSLPSRQLEQLASGSTSDKGSIRRRKSSRRSVHGTLRAARGKGASALAE
SFKHNDDFMDEIDGEARTTETLRRMVLPMQDKLSIKKSTSERRKQMTLQRGKKQKNIGWW
KRTKYSMGISWMHFKHRMAEFAYSLELWRSHMKKIEGHFGTGVTSYFLFLKWIFLLNIPV
FTLTLGFVVTPQVLYRYYQQEPSGYQTAVNTSTVTFTGEELLTGGNWFNNTELYYGFYTN
ETVTILSSSEYNMKYAYLFTCGGYYILCLITLAISISQSYKMNYIEGTGTNSFYNVSRVF
CGWDYNITDKSAARLKHKSFYNEMKEYLSGSKKKTTEKNIEERCKLFLLRVITNLIILGA
IGGLSYLVYWLSTNKALKNSVYIISDMALSLCVSGIFLIFPPIFTKIAQYERYEEPKNEL
YINMLRTMLLKTSVLGFLVYFWFTETAADKQKCWETEVGNEVYRLVLVDFFFILGATFFL
EFLRRVFGEHCCKKKQENQNDHQSSGPEFDIGRNTLDLIYSQALCWLGTFYSPLLSLIMM
VKLFIIFYVKTVSVLQNCQPSLRPWRAAKSHTIFMGFLFFFFLMAMVAVAVGVIIIEPSE
VCGPFRGEPKAYSIVTELIDSWKGDLKVLRDIINFISSPGSIASILVALCVGTYYMRIVM
VGHKEMVTLLRQQLHMEGRDKAYLLRMLQEVSKKKKEKLPPSNVNRLLSPSSISTLEAGQ
RSPGRRVFARTAADTAASITPGDTRLRQGESIGRLNGNIR
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatgcttaggaaatgttttgggttaatatttaggaattattgctctcattca
agtgcagatatggtcaaggtattaaatgttgcagaaaaaaatgacgcagcaaaaacactt
gctaatgtcatgtcacgaggaagtgctagaaagagagaagggttttcaaagttcaacaag
atttatgagttcaattacaatatattaaacaagaactgtttgatgatgatgacctccgtg
agtggtcatttgttggagctggacttcattggccagtaccgcaagtggtattcctgcaat
ccgttgtcgttgtttgacactcctgtagagaaaaaatgtccagagaactacacagacatc
aagagaaccttagagcgggaggtcaggagcagccagtacctcattatctggactgattgt
gacagagagggggagaacataggatttgaggtcattcaagtctgtagagcagtgaatccc
aatctgccgatctacagagccagattctctgaaatcacaccacaggcagttgccagagcc
tgcagtaacctagtggccccggataaaagagtcagcgatgctgtggatgtcagacaggaa
ctagacttgcggattggtgctgccttcaccaggtttcagacaatgcggctgcagaagatt
ttcccagaggccctggctgaaaagttgatcagctatggaagctgtcagtttccaaccctt
gggtttgtagtggagcgttacaaacaagtccaggccttcataccagaaccgttctggaaa
attaaagtgacccacatctttgatgatgctacaaagtgtgaattttcgtggaaaagaatc
cgtttatttgaccacaatgcttgcttagtcctgtatgaacaatgtacagagaatccaaag
gcaaaagtgatagaggtgaaatgtaaaccaaagagcaaatggaggcctgttccactcgac
actgtggaaatggagaaattagcatccagaaagttacgcatcagtgccaaggaaaccatg
aggatcgcagagagcctctacaccaaggggttcatcagctaccccagaacggaaaccaac
atgttccctaaggacctggaccttgtgatgctggtggacgaacagaccagagaccccagc
tggggaggctttgctagagggattttacaagacagaccgaatccaaggaatggaaacaag
acggaccaggctcatccccccatacaccccatcaaatacacagacggcctacagggtaat
gacgctagattatacgagttcattgtgcgacatttccttgctacctgttctaaagacgct
caaggacaggagactacagtgaccattgaaattgcggatgaaaagttttcagtgcagggt
ttaatgatcacagctcgacattatctggatgtgtatccgtatgacagatggaatgccaag
acaatacctgtgtatcaggaaggcgacatttttgagcccaatgctattgatatgctgttc
agtgaaacctctccacctccattactgaccgaagctgacctcatttcattgatggaaaaa
cacggaataggaacagatgcaactcatgcagagcacatagagaaaattaaaactcgaatg
tatgtaggagtaaacaacgacaatcgctttgtccccggtcagctggggatgggattagtt
gaaggctatgatgccatgggttatgaaatgtccaaacctcaactgcgtgctgagctagag
gcagatctcaaaaggatttgtgatggaaagaaggacaaaaacttggtgctgtcccagcag
gtggagaagtacaaggaagtgtttaaggtggcctgtcagcaggccctgaagattgaccaa
gcactgtcccagtacctgggagaggccagggatctccctgtcgaggacgctctggaacgc
cttgctgcagttccggttaagaaatgtccaaattgtggaatggatatggctttaaagaca
agaaagactggcgggttttacattggttgccttggatttccatcctgtcgttcagctatt
tggttacccgactttgttctggatgccagtgtcagtgatgttaaatgtgaagattgtcaa
gcccagctgatgaacttcagatttaagatgggatctgtacctccaatgcttcctttagaa
tacacaggatgtgttgctggatgtgatgacttactctcggaatctctacaaattaacaaa
tcagcccccctctctagtcagagaccaccacagcaaatggcaggaagtcagagactacca
cagcaagcggctacaagtcagaacagacaagatcagaggtcatcgtggtcagatgcccag
gattctcagcgagtgcctctgatgactgtccagccattcaacagacagacaaaccatcaa
gacagtggacatagtggacaggacattgtgtgtaactgtgggacaaatgcaatcctcctt
acggtcaaaaaggaggggccaaatcaagggaggcagttctacaagtgtgggagctcaggc
tgtaacttcttcctgtgggccgatgaatctcagaatcagcttacaaccaacaaccgcaga
cccccagggggtgggggagggttcaataatcaaaattcagacatggaattgaactgcaac
tgtggagctcctgctaagctgctgagagtgaccagagacggtcccaacaaagatcgagag
ttttactcgtgttccaaaccaagaggacaaggctgcgatttcttccagtgggcagatgtt
tcagatgaaaacagcggaagaaattttggaggagggggatttcaaggaaaccaaaatgtt
ggaaactcagacatccagtgtaaatgtgcagacccagccaaaatgttgacagtcaacaaa
gagggtcctaataagggtcgtccattttacgcctgtgccaagcccaggggtcaaggttgt
gatttctttcagtgggcagatgtaacagatgacagcggaggaaggcatttaggaggaggg
ggatttcaaggaaaccaaaacgttggaaattctgacgttcagtgtaagtgtggagaccca
gccaaaatgttgacagtgaacaaagagggtcctaataagggtcgtccattttacgcctgt
gccaaacccaggggtcaaggttgtgatttcttccagtggggagatgaaaactcaaaggga
ggcaatccaggtatcggtgaaaacaggaaaccgtcgtcggaaaagaagaggacatcctcc
gtgttggacagtggtaatacttccaacaagaagcgggccgctaggaaatgtggtctttgt
ggagaggaaggccacacaaagagaacatgtagaaaaacctcgattctacagtatgtgttg
agagggtacacggaggcgatggctgaatatagaggtggatatggttcaagtgaccgggat
caacatattcccatgcaggaccggtcccattttaatccagcgtaccgcgatgacagtctc
ccacatgagagggacagagtggtggtagacatgaatgggatacacctggatgaacgtcgc
ggttcagatggttccagggaattccgtcctgacgagagcactcgcaggaaatgggcagca
aactcagatttcagggacacggcagatctaatccaatccctccctagtcgacagcttgag
caattagccagtggatcaacctcagacaaaggctccatcaggagaaggaagagcagcaga
cggtctgtacacggcacattaagggctgcaaggggtaaaggggccagtgcactggctgag
tcattcaagcacaacgatgatttcatggatgaaattgatggagaagccagaacaacagag
acattgaggagaatggttctacccatgcaggacaaactctcaatcaaaaaaagtacatca
gaaagaaggaaacagatgacgttgcaaagagggaagaagcaaaagaatatagggtggtgg
aagaggaccaaatacagtatgggcatttcctggatgcactttaagcatcggatggctgag
tttgcgtattccctagaattatggagaagtcacatgaagaagatcgagggccattttggg
acgggagtgacgtcctacttcctcttcttgaagtggatttttctcctaaacatcccagtc
ttcaccctgacgctcggctttgtcgtcaccccccaggtgttatacaggtactaccagcag
gaacccagtggataccaaactgccgtgaacactagcactgtgacttttacaggggaggaa
ctgctcacagggggaaattggttcaacaacactgaactttactacggattttacaccaat
gaaacggtgacaatactttcttcatctgagtacaacatgaagtatgcctatctgttcaca
tgtggcggttactacatcctgtgtctgatcaccctcgccatcagtatttcccagtcgtac
aaaatgaactacatagaaggcacaggaacaaactcattctacaatgtcagtcgggtgttc
tgtggctgggactacaacatcacggacaagtcagcagcccgactgaaacacaagagcttc
tacaacgaaatgaaggagtatttgtcgggcagtaagaagaagacaacagagaagaacatt
gaggagcgctgtaagctgttcctgttgcgggtaatcaccaacctgatcattctgggcgcc
atcggtggcttgtcttaccttgtctactggctgtcgaccaataaagcactaaagaactct
gtgtacattatcagcgatatggctctttcactgtgcgtgtcgggcatttttctgattttt
ccaccaatctttaccaagattgcccagtatgaaagatacgaggagccaaagaatgagtta
tacatcaacatgctcagaaccatgttgctgaagaccagtgtgctaggatttctagtgtac
ttctggttcactgaaacagccgctgacaaacagaaatgttgggaaacagaggttggcaat
gaggtctatcgtcttgtcctggtagactttttcttcattcttggagcaacgttttttctg
gaatttttgcgcagggtgtttggggaacactgttgtaaaaagaaacaggaaaaccagaat
gatcatcagtcctcgggacccgagtttgacatcgggaggaacacactggatctgatctat
tcccaggctctgtgctggctgggcaccttttattctccacttctctcccttatcatgatg
gtgaagctcttcattatcttctacgtgaaaacagtcagtgttctgcagaactgccagcct
tcactgcgaccctggagagcagctaaaagtcacaccatctttatgggcttcctcttcttt
ttctttctgatggcgatggtggcagtggctgtaggtgtcatcataattgaacctagcgaa
gtatgtggtccattccggggggagccaaaggcctactctatagtgactgaattgattgac
agctggaagggcgatttgaaggtgctccgggatattattaactttatatccagccccggc
agtattgccagtatccttgtagcgctctgtgtggggacgtattacatgagaattgtgatg
gttggacacaaagaaatggtgacattactgaggcagcaactacacatggaaggaagagat
aaggcgtatttactgagaatgttacaagaagtcagtaagaaaaagaaagagaagctacca
ccatcaaatgtcaacaggctactctctcccagctccatctccaccctggaggcaggtcaa
aggtcaccaggtcgccgtgtgttcgcgaggactgcagcagacacagctgctagtattaca
cctggagacacaagactgaggcagggggagtccattgggaggttgaatggcaatatacgc
tga
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