Ostrea edulis (European flat oyster): 125669286
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Entry
125669286 CDS
T09123
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125669286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125669286
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125669286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125669286
NCBI-ProteinID:
XP_048759705
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All DBs
Position
4:complement(54568075..54585849)
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AA seq
514 aa
AA seq
DB search
MATNTTPSQPGSSSNTTQEFVVRVPKDHKKKYKMMKFSTGNDVDFVKLSQTPIRMERENN
LKEFKSAYDIDVHPKFGAGSEYGREQKDEARRKKYGIMSRKYNPDAQPWILKIGKNKEMK
KMKGVREGTITENTSYYIFTQCADGAFEAFPVEEWYTFSPMIKYKYLNSEEAEEEFSRRD
KTMNLFSVMVRNRVRNEEEIVNPDEEDKAKTKTKGKKKKEKNEFLITEDEDWTNFSDDGN
EDEDDGEGPDEEDEDSKPKKKGKKNLKNKRTAKHNSDDEAVEESDEGDFDDKEVDYITDS
SSDDDMEDREKKNTYEEKGVDEERGLRKLIDSEEEESEEEEDKKSDKAEEEEDEDKTKKE
KKKDGSESSSSSSSDSDSDIEKEENLASVIFMQKNKKERSSPVPRSVTPSSGEGEDKKAQ
KRKLESEDVASKKSRTESPGASGKTPSAGITEEAIRRYLMRKPMTAKELLKKFKSKKVNM
SKEEMTSTLTKYLKKIQPDKKIINKKMYFSLKKD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaacaccacaccaagccagcctggatcatccagtaacacaactcaagaattt
gttgtgagagtgccaaaagatcacaaaaagaaatataaaatgatgaagttttcaacagga
aatgatgttgattttgtgaaattaagtcagacaccaataaggatggagagagaaaataat
ctgaaggagtttaagtcagcttatgacattgatgtacaccccaaatttggagctggtagt
gagtatggacgggaacaaaaagacgaagccaggcgcaaaaagtatggaatcatgtccaga
aaatataatccagatgcccagccatggattctaaaaattgggaagaataaggagatgaaa
aaaatgaagggtgtgagagagggaacaatcaccgagaacacatcttactatatttttacc
cagtgtgccgatggagcatttgaagcattccctgtagaagagtggtacacattcagtcca
atgatcaaatacaaatacctcaattcagaggaagctgaagaagaatttagcagacgagac
aaaacaatgaatctgttctcagtgatggtgagaaatcgtgtgaggaatgaggaagaaatt
gtaaatccagatgaagaagataaagcaaaaacgaagaccaaaggaaaaaagaaaaaggag
aaaaatgaatttttaattactgaggatgaggactggacaaatttttctgatgatggaaat
gaggatgaggatgatggggaggggccagatgaggaagatgaagattctaaacctaagaag
aagggtaagaaaaatctaaagaacaagagaactgccaaacacaattctgatgatgaggct
gttgaggagagtgatgagggtgactttgatgacaaagaagtggactatatcacggactcc
agcagtgatgatgatatggaggacagggagaagaaaaacacgtatgaagaaaaaggagtg
gatgaagaacgagggttgaggaagctaattgattctgaggaggaagaaagtgaggaggag
gaagacaagaaatcggacaaagctgaggaggaagaggatgaggacaagaccaagaaagaa
aagaagaaagatggctcagagagcagcagtagttccagttcagacagtgattctgatata
gagaaggaagaaaatctggcctcagttatattcatgcagaaaaataaaaaagaaaggagt
tcacctgtaccccgatctgtcacacccagttcaggagagggagaggataagaaagcccag
aaaagaaagttagagtctgaagatgttgcctcaaagaagtccagaacagagagcccaggg
gccagtggcaagacaccaagtgctggaattacagaggaagcgatacgtcggtacttgatg
agaaaaccaatgactgcaaaagaactcctaaaaaaattcaagtccaaaaaggttaacatg
agcaaagaggaaatgacaagtactctgacaaaatacctcaaaaagatccagccagacaag
aagattatcaacaagaagatgtatttttctctcaaaaaagattga
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