KEGG   Ostrea edulis (European flat oyster): 125669402
Entry
125669402         CDS       T09123                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125669402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oed03019]
    125669402
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125669402
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N MMR_HSR1 GTP_EFTU_D2
Other DBs
NCBI-GeneID: 125669402
NCBI-ProteinID: XP_048759825
LinkDB
Position
4:complement(42305172..42333924)
AA seq 762 aa
MSRHRNVRTMNYEDEYYDEDEVYGHSYDDSYCVSPATAAQFTFNRERDINLSSYMEEGIP
EEEDESDHEPLNDSGRDNIKLSDVERARLNSCLEEIGNVLGDTIPEHIVSQTVVKNHYNI
QASLNELLNKNEAPKPQRQPRADRRSNRQDGLSEFAPVQPTVQLKTPVKKTSTPDITTSA
VSQKKPASTTEELVKSTVNGLVSVSSAGKSAVKDSRTNAVNRNTNSEVNVTADDRRDVNV
TADDRRDVNVTADDRRDDMTDVVDTSLKVANSEVDLCAELTRKSELDISSKPTLSIVPAT
PKSTSKMKQDKAKLKAEYEKRKTGKDLLNLVVIGHVDAGKSTLMGHLLYQLGVVNKRAMH
KYEQESRKLGKGSFAYAWVLDETEEERSRGVTMDIAQTTFETPNKQITLLDAPGHKDFIP
NMITGTAQADVAILVVNATRGEFETGFESGGQTREHALLARSLGVSQLLVAVNKMDTVDW
SQSRYDDIVKKLGLFLKQAGYKDSDLSYIPCSGLGGENLAKTVTEPKLSAWYKGSTLVEQ
IDKFKPVERSMDKPFRLIISDVFKGMGSGFSVVGRVSSGSVQSSEKVLVQPAGDLAVVKG
VSMEDSDNTCGFAGDHVTIVLTGMDMAHVNVGSVICDPQNPIKSAIRIRARIVLFNLELP
ITKGYTVVFHYQSITEPAVIKRLNSQLNKNTGEVVKSKPKCLVKNSSAVVEIEFERPVCL
EMYKDYKDLGRFMLRNGGHTIAAGLVEEVLKTKSKTEENSTE
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgtcaaggcatcgtaatgtacggactatgaactatgaggatgaatattatgatgaggat
gaggtttatgggcattcttatgatgacagctactgtgtctcgccagcaacagctgcacag
ttcacatttaatcgggagcgagatattaatctgtcatcgtacatggaggagggaattcca
gaggaagaagatgagagtgaccacgaaccgttaaacgattcaggaagggacaatatcaaa
ctcagtgatgtggaacgagccagactgaattcctgcttggaggagattggaaatgtccta
ggtgatactattccggagcacattgtgtcccagactgtcgtgaagaatcattacaacata
caggcttctctgaacgaactcctcaataaaaatgaggcacctaaaccacaaagacagccc
agggcagacagacgatcaaacagacaagatggtctttcagagtttgcacccgttcaacca
acagttcaactgaaaaccccagtaaagaaaacctccacaccagacatcactacctccgcc
gtgtcgcaaaagaaaccggcatccaccacagaggagctcgtaaaatcaactgtaaatgga
ctagtctctgtgtccagcgctggtaaaagtgctgtaaaagattcaaggactaatgctgta
aacagaaatacaaacagtgaagtgaatgttacagctgatgacaggagagatgtgaatgtt
acagctgatgacaggagagatgtgaatgttacagctgatgacaggagagatgacatgaca
gatgtggtggacacgagtcttaaagttgcgaattctgaggtggatctctgtgctgaactg
acacgtaaaagtgagcttgatatctcgagtaaaccgacactaagcatcgttcctgcaact
ccaaaaagtacctcaaaaatgaaacaagataaagccaaattaaaagcagagtatgagaag
aggaaaacagggaaggatctactgaacttggtggtcattggtcatgtcgatgctggaaag
agtacattaatggggcacctgctgtatcagctgggcgtcgtcaacaagagagcaatgcac
aaatacgaacaggagtccagaaaactgggaaaagggtccttcgcttatgcctgggtctta
gatgaaacggaggaagaaagatcaaggggagtaacgatggacattgctcagacaacattc
gagaccccaaacaaacaaataactctgctagacgcaccaggacacaaagatttcatccca
aatatgatcacaggcaccgcccaagcagacgttgcaatcctagtggtcaatgctacgcgt
ggagaatttgagactggttttgaatcaggtggacagaccagagagcatgctctcttagct
cgatctctaggcgtgtcacaactgttagtagccgtcaataagatggacactgtggactgg
tcacagagtcgttatgatgacatcgtgaaaaaattaggcctgttcctgaagcaagctgga
tataaggactcggacctctcgtacattccctgcagtggactgggaggggaaaacctagct
aaaacagttacagaacccaagctctcagcctggtataaaggaagcactctggtggaacaa
atagacaagttcaagccagttgagcgttccatggataaaccgttccgtctgatcatcagt
gatgttttcaagggaatgggtagtggatttagtgttgtgggccgtgtcagctcgggctca
gtccaatcttctgagaaagttctggtccagcctgctggagatttagcggtcgttaaaggt
gtgtctatggaggactcggacaacacctgtggctttgcaggagaccatgtaactattgta
ttaactggcatggatatggctcacgtcaatgttggcagtgtaatatgtgatcctcagaat
cctattaaaagtgccataaggatccgggcgaggattgttttatttaatttggagttaccc
atcacaaaaggatacacggttgtgtttcattaccagtctataactgaaccagctgtgatt
aaacgtctcaacagtcaactcaacaaaaacactggagaagttgtcaaaagtaaacccaaa
tgcctggtgaagaacagcagtgcagttgtggagatagaatttgagcgacctgtctgtcta
gaaatgtacaaagactacaaagacctgggcaggtttatgttgaggaatggtggtcataca
atcgctgccggactggtggaggaggttttaaaaaccaagtcaaaaacagaagaaaactcg
acagaataa

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