Ostrea edulis (European flat oyster): 125669402
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Entry
125669402 CDS
T09123
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125669402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125669402
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125669402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
125669402
NCBI-ProteinID:
XP_048759825
LinkDB
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Position
4:complement(42305172..42333924)
Genome browser
AA seq
762 aa
AA seq
DB search
MSRHRNVRTMNYEDEYYDEDEVYGHSYDDSYCVSPATAAQFTFNRERDINLSSYMEEGIP
EEEDESDHEPLNDSGRDNIKLSDVERARLNSCLEEIGNVLGDTIPEHIVSQTVVKNHYNI
QASLNELLNKNEAPKPQRQPRADRRSNRQDGLSEFAPVQPTVQLKTPVKKTSTPDITTSA
VSQKKPASTTEELVKSTVNGLVSVSSAGKSAVKDSRTNAVNRNTNSEVNVTADDRRDVNV
TADDRRDVNVTADDRRDDMTDVVDTSLKVANSEVDLCAELTRKSELDISSKPTLSIVPAT
PKSTSKMKQDKAKLKAEYEKRKTGKDLLNLVVIGHVDAGKSTLMGHLLYQLGVVNKRAMH
KYEQESRKLGKGSFAYAWVLDETEEERSRGVTMDIAQTTFETPNKQITLLDAPGHKDFIP
NMITGTAQADVAILVVNATRGEFETGFESGGQTREHALLARSLGVSQLLVAVNKMDTVDW
SQSRYDDIVKKLGLFLKQAGYKDSDLSYIPCSGLGGENLAKTVTEPKLSAWYKGSTLVEQ
IDKFKPVERSMDKPFRLIISDVFKGMGSGFSVVGRVSSGSVQSSEKVLVQPAGDLAVVKG
VSMEDSDNTCGFAGDHVTIVLTGMDMAHVNVGSVICDPQNPIKSAIRIRARIVLFNLELP
ITKGYTVVFHYQSITEPAVIKRLNSQLNKNTGEVVKSKPKCLVKNSSAVVEIEFERPVCL
EMYKDYKDLGRFMLRNGGHTIAAGLVEEVLKTKSKTEENSTE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggcatcgtaatgtacggactatgaactatgaggatgaatattatgatgaggat
gaggtttatgggcattcttatgatgacagctactgtgtctcgccagcaacagctgcacag
ttcacatttaatcgggagcgagatattaatctgtcatcgtacatggaggagggaattcca
gaggaagaagatgagagtgaccacgaaccgttaaacgattcaggaagggacaatatcaaa
ctcagtgatgtggaacgagccagactgaattcctgcttggaggagattggaaatgtccta
ggtgatactattccggagcacattgtgtcccagactgtcgtgaagaatcattacaacata
caggcttctctgaacgaactcctcaataaaaatgaggcacctaaaccacaaagacagccc
agggcagacagacgatcaaacagacaagatggtctttcagagtttgcacccgttcaacca
acagttcaactgaaaaccccagtaaagaaaacctccacaccagacatcactacctccgcc
gtgtcgcaaaagaaaccggcatccaccacagaggagctcgtaaaatcaactgtaaatgga
ctagtctctgtgtccagcgctggtaaaagtgctgtaaaagattcaaggactaatgctgta
aacagaaatacaaacagtgaagtgaatgttacagctgatgacaggagagatgtgaatgtt
acagctgatgacaggagagatgtgaatgttacagctgatgacaggagagatgacatgaca
gatgtggtggacacgagtcttaaagttgcgaattctgaggtggatctctgtgctgaactg
acacgtaaaagtgagcttgatatctcgagtaaaccgacactaagcatcgttcctgcaact
ccaaaaagtacctcaaaaatgaaacaagataaagccaaattaaaagcagagtatgagaag
aggaaaacagggaaggatctactgaacttggtggtcattggtcatgtcgatgctggaaag
agtacattaatggggcacctgctgtatcagctgggcgtcgtcaacaagagagcaatgcac
aaatacgaacaggagtccagaaaactgggaaaagggtccttcgcttatgcctgggtctta
gatgaaacggaggaagaaagatcaaggggagtaacgatggacattgctcagacaacattc
gagaccccaaacaaacaaataactctgctagacgcaccaggacacaaagatttcatccca
aatatgatcacaggcaccgcccaagcagacgttgcaatcctagtggtcaatgctacgcgt
ggagaatttgagactggttttgaatcaggtggacagaccagagagcatgctctcttagct
cgatctctaggcgtgtcacaactgttagtagccgtcaataagatggacactgtggactgg
tcacagagtcgttatgatgacatcgtgaaaaaattaggcctgttcctgaagcaagctgga
tataaggactcggacctctcgtacattccctgcagtggactgggaggggaaaacctagct
aaaacagttacagaacccaagctctcagcctggtataaaggaagcactctggtggaacaa
atagacaagttcaagccagttgagcgttccatggataaaccgttccgtctgatcatcagt
gatgttttcaagggaatgggtagtggatttagtgttgtgggccgtgtcagctcgggctca
gtccaatcttctgagaaagttctggtccagcctgctggagatttagcggtcgttaaaggt
gtgtctatggaggactcggacaacacctgtggctttgcaggagaccatgtaactattgta
ttaactggcatggatatggctcacgtcaatgttggcagtgtaatatgtgatcctcagaat
cctattaaaagtgccataaggatccgggcgaggattgttttatttaatttggagttaccc
atcacaaaaggatacacggttgtgtttcattaccagtctataactgaaccagctgtgatt
aaacgtctcaacagtcaactcaacaaaaacactggagaagttgtcaaaagtaaacccaaa
tgcctggtgaagaacagcagtgcagttgtggagatagaatttgagcgacctgtctgtcta
gaaatgtacaaagactacaaagacctgggcaggtttatgttgaggaatggtggtcataca
atcgctgccggactggtggaggaggttttaaaaaccaagtcaaaaacagaagaaaactcg
acagaataa
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