Ostrea edulis (European flat oyster): 125669415
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Entry
125669415 CDS
T09123
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125669415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125669415
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
90S particles
GTPase
125669415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
DO-GTPase2
RNA_helicase
AAA_22
AAA
FeoB_N
ABC_tran
AAA_18
Motif
Other DBs
NCBI-GeneID:
125669415
NCBI-ProteinID:
XP_048759857
LinkDB
All DBs
Position
4:9637073..9681522
Genome browser
AA seq
1216 aa
AA seq
DB search
MEEDANKKVHRKRQAGPKAEKKKAKNKHQQDLTPQQRNPKAFAIQHAQKTAKLIKRTQDI
KTKKQHIPMVDRTPLEPPPIVIAIVGPPKVGKSTLLQCIVKNFTKQRLANVQGPVTVVSG
KSRRLTLMECNNDINSMIDLAKVADLVLLLVDASFGFEMETFEFLNICQVHGFPRIMGVL
THLDAFKDNKQMRKTKKRLKHRFWTEVYQGAKLFYLSGMVNEEYQKTEVHNLCRFISVMK
FRPLQWRLTHPYLLVDRIEDITDPEEIRQKPKIDRKLSMYGYVRGTHLKNHSMVHIPGCG
DYSISDMQTLPDPCPMPDKEKKKTLHVKERLIYAPMSGVGGVIYDKDAVYIDLGGSHSLT
QNAEESDAPMNELVASLMNVNNPLDEKMTTSHMTLFSNAAPIIEADLQEDKDDDEEISRI
RRLAEFDVDPEKDHKQRKKTEDLVFDDSDEEGEAFSLFSNSVKKQIGTNSEKADRIHENE
NSESESGSNSGSDMEYSEEEEIAVKKPKLSRTSSEGKSGSFNFAGADVTDPESDACAESD
DDVQNGRSDISKSVMEDSDDDVDEEDDSNSDEDSEGSEEEEEDIVEEADSESDEEDGEEE
GHLKWKAKIAASAAESFKRRKSDRINYRKLIYGKVEEEEQEEEEEDELGGLFKVLKQKEQ
KKNPNLEADMTDSSKCVPNKFQAWELEEVQDLIRDCFVTGNWDKSEDAKELLNQDDELFG
DFEDLETGEVHHGDGGEEDEEDDEGEDGEEESSERKKTKAEKTALERRMEKKKKLKEMFD
NEYDMKGDNEFYDNWKLQNEEQAKLNRAEFENMDDSLRVGYEGFRPGMYVRVELERLPCE
LINNFDATFPLILGGQQSVEGNIGFVQTRMKKHRWYKRILKSRNPLIISLGWRRFQSIPL
YSIQDHNFRNRLLKYTPQHLHCHACFWGPITPQGTGLLAVESLTGNEPGFRIAATGVVLE
LDKSMQIVKKLKLTGTPYKIFKKTAFIQGMFNSILEVTKFEGAKIRTVSGIRGQVKKGLR
TPEGAFRATFEDKVLLSDIVFMRTWYPVEVPQFYATVTSLLLPPAEKVAWVGMKTLGQLK
RERAVTAPLKEDSLYKPVERKKRYEPTLKIPKDLQKMLPFKDTPKILKEKKDPYKRVAVI
LEPHEAKVNKLMKMVKNVYQHKMKSDRMRMRERVSKHQKEMDRIGVIKARKQKQVKKDIY
RALGKLEKKRDQYKKD
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatgcaaataagaaagtacatagaaagcgacaggcggggccgaaggcagaa
aagaaaaaggcaaagaataaacaccaacaagatttaactccgcaacagagaaaccctaaa
gcctttgctattcaacatgctcagaaaactgccaagcttattaaaagaacacaagatatt
aagaccaagaagcagcacattcccatggtggacaggacaccactggaaccgcccccaata
gtgatagccattgtcggcccacccaaagttggaaagtccaccctgttacagtgcatagtt
aaaaatttcacaaaacagaggcttgccaatgtccaaggcccagttacggttgtgtcaggt
aaaagcaggagactgacattaatggagtgcaataatgacatcaacagcatgattgatctg
gccaaagtagcagacctggtattattgttggttgatgcaagttttgggtttgaaatggaa
acttttgagtttctgaatatctgccaagtgcacggctttccaagaattatgggagtactg
actcatcttgatgctttcaaggacaacaaacaaatgaggaaaaccaaaaagagactgaaa
cacagattttggacagaggtgtatcagggtgctaagttgttctatctttctggaatggta
aatgaagaataccagaagacagaagttcacaacctgtgtcgattcatctctgtcatgaag
ttcaggcccctgcagtggcgactcacacatccctacctccttgtggacagaattgaagac
atcactgacccagaggagattcgacagaaacctaaaattgacaggaagctgtccatgtac
ggttacgtcagagggacacacctgaagaaccactccatggtccacatcccaggttgtggg
gattacagtatcagtgatatgcagactttaccagatccatgtccaatgccagacaaggag
aagaaaaagaccctccatgtgaaggagagattgatctacgctcccatgtctggggtgggg
ggagttatttacgacaaggatgccgtgtatatagacctggggggcagccattccctcaca
cagaatgcagaggagtctgatgccccgatgaatgaacttgtggcctctttgatgaatgta
aacaatccactggatgagaaaatgacaaccagtcacatgaccttattctctaatgctgcc
ccaatcatagaggcagatttacaagaggataaggatgacgatgaagaaatctcgaggatt
cgtagattggcggagtttgatgttgatccagaaaaagaccacaaacaacgaaagaaaacg
gaggacttggtgtttgatgatagtgacgaagagggagaggcattcagtctgttttcaaac
tcggtgaaaaaacaaattgggactaattctgaaaaggcagatcggattcatgaaaatgaa
aacagtgaatctgaatcaggatcaaatagtggctcagacatggagtattctgaagaggaa
gaaattgcagtaaaaaaacccaaactgtcaaggacttcaagtgaaggaaaatctggttcc
ttcaattttgctggtgctgatgtgactgaccctgaaagtgatgcatgtgccgagtccgat
gatgatgtgcaaaatggaagaagtgatatttctaaaagtgtgatggaagatagtgatgat
gatgttgatgaagaggatgattctaatagtgatgaggacagtgaaggcagtgaggaggag
gaagaggacattgtggaagaagctgatagtgaaagtgatgaagaggatggtgaagaagag
ggacatttaaaatggaaagctaaaatagctgcttcagctgctgagtcattcaaaaggagg
aaatcagataggattaattataggaagcttatctatgggaaagttgaggaagaggagcag
gaagaggaggaggaggatgaattgggaggactgtttaaagtgttaaaacagaaagagcaa
aagaaaaatcccaacctggaagctgatatgacggacagctctaagtgtgtgcccaacaaa
ttccaggcctgggagttagaggaggtgcaggatttgatcagggactgctttgtaacagga
aactgggacaagagcgaggatgctaaagagctgcttaaccaagatgatgaactgtttgga
gactttgaggatctagagactggtgaagttcaccatggtgatggaggtgaagaagatgaa
gaagatgatgagggtgaggatggtgaagaagagtcatcggagaggaagaaaacaaaggca
gagaagacggccttagaacgaagaatggagaagaagaagaagctgaaggagatgtttgat
aatgagtatgacatgaagggagataatgagttctatgataactggaaactacagaatgag
gaacaagccaagttgaaccgagctgagtttgagaacatggacgatagtttgcgcgtcggc
tacgaggggttccgtccaggtatgtacgtcagagtggagctggagagactgccatgtgaa
ctcatcaataactttgatgccacttttcctctcatacttgggggtcaacagagtgtggag
ggaaacattggatttgtccagacacgcatgaagaagcataggtggtacaaaaggatcctg
aagagtcgtaaccccctgattatctcccttggatggcggaggttccagtctattcctctg
tactccatacaggaccacaacttccggaatcgcctactcaagtacaccccacaacatctt
cactgtcacgcctgcttctggggtcctataacaccccagggtacaggtttactagccgtc
gagagcctgacaggaaatgagccaggcttcaggattgctgccacaggtgttgtcctagaa
ttggataaatcaatgcagattgtaaagaaactgaaacttacaggcacaccttacaagatc
tttaagaaaactgcattcattcagggcatgttcaactccatcctggaagttaccaagttt
gaaggtgccaagattaggacagtgagtggaatccggggacaggtgaaaaaggggttgagg
acccctgagggagcatttagggccacattcgaggacaaagttctcctcagtgatattgtg
tttatgaggacttggtaccctgtggaggtgccccagttctatgctactgtgacctctcta
ctgttacccccagcagagaaagtagcctgggtcgggatgaagactctgggtcagctgaag
cgagagagagctgtaacagccccactgaaggaggattccctctacaagccggttgaaaga
aaaaagagatatgaaccaactctgaagatccccaaggatttacagaagatgctacctttt
aaggacacaccaaaaattcttaaggaaaagaaggatccatataaaagggtagctgtcatt
ctggaaccacatgaagcaaaggttaataaactgatgaagatggtgaagaatgtctatcaa
cataaaatgaagtcagacagaatgaggatgagagagagggtgtctaaacatcagaaagaa
atggacaggatcggggtgattaaagccaggaaacagaagcaagtcaaaaaggacatctac
agggcgcttggcaagctggagaagaagagggaccagtacaaaaaggactga
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