Ostrea edulis (European flat oyster): 125669467
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Entry
125669467 CDS
T09123
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03420
Nucleotide excision repair
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125669467
09124 Replication and repair
03420 Nucleotide excision repair
125669467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oed03051
]
125669467
03400 DNA repair and recombination proteins [BR:
oed03400
]
125669467
Proteasome [BR:
oed03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125669467
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125669467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
DUF2604
DUF2399
DUF1421
Dsc3_N
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
125669467
NCBI-ProteinID:
XP_048759936
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All DBs
Position
4:42610916..42624939
Genome browser
AA seq
401 aa
AA seq
DB search
MFVTLKTLQQQTFKVEVGPEDTVKSLKEKVENEKGKDQFPAGGQKLIYAGKILDDEKKVS
EYKIEEKNFVVVMVTKPKPAAAKPAESTPAPPAAAPAPATTETPKLQEEKKEEKEKEETT
QSEAKTETPSATSTATASTETQESEASGQVSAESMLVTGQEYENMVLEIMSMGFERDQVV
RALRASFNNPNRAVEYLFQGIPETTEQEAPPTSAPVAPAPAPTSAPVSEQTAQQTPSASN
PPGTGSLLVPPAGQTGGEDPLSFLRNQPQFQRMRQLIQENPQVLPTLLNQIGRSNPPLLQ
MISQNQERFIQMLNEPLEAGEVTDQAQGGGGGGGGLPSAGGPPGSGFIQVTPSEKEAIER
LKALGFAESMCIQAYFACEKNEDLAANFLLSQNFDDDEQQS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttacattgaaaactttacaacaacagacattcaaagttgaagtgggccccgaa
gacacggttaaaagtttgaaagaaaaagtagaaaatgaaaaaggaaaagaccaattccca
gctggaggacagaaactgatatatgcaggaaaaatcctcgatgatgagaagaaagtcagt
gaatacaaaatcgaagaaaaaaattttgttgttgtcatggtaacaaagccgaaaccagca
gcagcaaagcctgcagagtccacacctgcccctcccgctgctgccccagcccctgctacc
acagaaacaccaaaacttcaggaggagaagaaggaggagaaggagaaggaggagactaca
caaagtgaggccaaaacagaaaccccatcagctacaagtacagctacagcctctacagag
acccaggagagtgaagcatccggtcaagtgtcagcagagagcatgttggtcaccgggcag
gagtatgaaaacatggttctcgagatcatgtccatgggctttgagagagatcaggtggtg
cgagcgttacgtgctagctttaacaatccaaacagagcagtggagtatttgtttcagggg
attcccgagacaacagaacaggaggccccccctaccagtgcccctgtagctccagcccca
gcccccacctcagcacctgtatccgaacagactgcccagcagactccctcagcttctaac
cctccaggaactgggtcattactggtgcccccagcaggacagacaggaggagaagatccc
ctgtcatttcttcgaaaccaaccacagtttcagagaatgagacagctgattcaagaaaat
cctcaagttttaccaacactcctgaatcaaatagggcgatccaacccgcctttattacag
atgataagtcagaaccaggagagattcattcagatgttaaatgaacccctggaggctggt
gaggttacagatcaagctcaggggggtggtggtggtggtggtggtctgccttccgcaggc
ggtcctccaggcagcggtttcatacaagtaacgccatcagaaaaagaggctatagagagg
cttaaagcattaggatttgcagaaagtatgtgcatacaggcctatttcgcatgtgaaaag
aatgaggatttagctgcaaattttctattatcacagaattttgatgatgatgaacagcag
agttga
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