KEGG   Ostrea edulis (European flat oyster): 125669472
Entry
125669472         CDS       T09123                                 
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125669472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oed03000]
    125669472
   03021 Transcription machinery [BR:oed03021]
    125669472
Transcription factors [BR:oed03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    125669472
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125669472
  RNA polymerase III system
    TFIIIB
     125669472
  RNA polymerase I system
    SL1/TIF-1B
     125669472
SSDB
Motif
Pfam: TBP NAT10_TcmA_helicase SCP1201-like
Other DBs
NCBI-GeneID: 125669472
NCBI-ProteinID: XP_048759959
LinkDB
Position
4:42782613..42793361
AA seq 281 aa
MTDIQECLPRETQGMEQVADLGNLTELRENAASAEANGYILEDEPPTIDIIINNVVCSFN
TRCHLNLRNIAMEGSHVEYRREQSMCNMKIRRPYTTATIWSSGKIVCTGATSEEESKIAA
RKFARKLQRLGYTVKFTNFRVVNVLGTCGMPFRIKINSFSQKFPKEASYEPELHPGVTYR
LKEPKATLKIFSTGSITVTAPSVANVQAAIEHIFPLVSEFKAADKDTDKDIVAQEIKFMQ
KQRGSLQPKQPVSKYEDYEKVEVYDTDYSDDEEFDSDESQD
NT seq 846 nt   +upstreamnt  +downstreamnt
atgacggatattcaagagtgccttccgcgggagacacagggtatggaacaagtggcggac
ctcgggaacttgacggaattgagagaaaacgctgcgtctgctgaggccaatggttacatt
ctggaggatgaacccccgacaatagacataataattaacaatgttgtctgcagctttaac
acacggtgtcatctcaacctcagaaatatcgcaatggaaggatctcatgtggaatacaga
agggaacaatcaatgtgcaacatgaaaatcagacggccttacacaacagcaacaatttgg
tcatcaggcaaaatagtttgcacgggagcaacaagtgaagaagaatccaagatagccgct
agaaaatttgccagaaaattacagcgtctaggatacaccgtgaagtttaccaacttcagg
gttgtcaacgtgcttgggacatgtggcatgccgtttcgtatcaagataaattccttttca
caaaaatttccaaaagaagcaagttatgaaccagagttgcacccaggtgtgacctatcga
ctgaaagaaccaaaagctacccttaagatattttctacaggaagcatcactgtaacagct
ccgagtgtagcgaacgttcaagctgccatagaacacattttcccgttagtctcagaattc
aaagctgcagacaaagacacggataaagacattgtagctcaagaaattaaattcatgcag
aaacaacgaggctcactgcaaccaaagcaacccgtgtccaagtacgaagattacgaaaaa
gtggaagtgtacgacactgactatagtgacgacgaagaattcgacagcgatgaaagtcaa
gattga

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