Ostrea edulis (European flat oyster): 125669529
Help
Entry
125669529 CDS
T09123
Name
(RefSeq) HEAT repeat-containing protein 1-like isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125669529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125669529
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125669529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT_2
ARM_RUK
TAF6_C
Viral_NABP
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
125669529
NCBI-ProteinID:
XP_056020026
LinkDB
All DBs
Position
4:85393761..85435464
Genome browser
AA seq
2065 aa
AA seq
DB search
MTSLAKQLERLAVPHIRAVYSEDKRRKSLLFDPKEAAALDKEAIYALGTNGIAELQALDP
VFDEFQESLFGESTMSFQRSIQTTEINAQIDETIESFLQRLSPYCLLKPAHKALEWLIYR
FDIDVYNMDAFMICLLPFHESKIFVRAVQLLRLKSRTATKWDWLLPIQASGVHLPRQTLI
NHCNSNNGFFSFLCDRIYKTIKDTVRRDEGDKLRVIFSLYMSTVVGMLEFGGASENLVAA
LLPHLSRGMKSKVTQYRAATYMILAQLVCKTSLRQDLLKTLLSALFKKSLFKLEQETMTC
AALMFQHQEITSLPARSFKHICRQPGLIESLKTLTSAGNCDGLTMAFLDRLVVMAVKQDS
DMSMSESSDSENISSTPRYLDILHDFLSSVPLSESVSDNLTKKIIENYLLCANVIVNDGE
LEELSMKHRKTVQLLEDRYPTSLDRAVQEFVDGEEEDVKRQIQDFLNLSVLSVKHQHLSD
IEGSLTLSLNHRTPAIRVNAVQHLLKNADKCDGDYVSEVLITRLADDSPEVMETVLKVGQ
SLWSMINDTTQMCTLLGKIVLKCQPWSGVGKMALGILCSCDPKFQPSVILILFPRFLLCT
PDDLKFLKDLCETDLAKNNQIIKSVAQKLKKEAGKKKHSTENLAEMSIAVAGWLADAVMK
TSDCDEFLTRLQDGGDDTRYLCQLALFLNAAIPLMSEKRDQIKWFGNQLKLLHQLQPGGV
PESDWEEVITVVTDTCKSLVAGQKQGNSLSLCLLSNLIQLIPTLQNKADFWNYDDDALAC
SVRLFDYLILQSSTSVCRNGYRRLVAQFLQHFSDNDVRMKFLGLLWTQHCNDLSERSGVK
VSLQIQALLIGKQLLHESKKVQVPDSVIINLILAMTSPFIRIRQTTMECLKLLRDKDGLG
QSVFVPLVNHIQKCEMEIVSDQEYLKQTVTSVLSSGPNKGKRRSHSGRKTDSSLVSMIVD
VVQNSDTPQYIRNNLLQITALHNSKSFLSDLLPTFQSLLSACLCDNPPPLAVDSCRLLIQ
RWTLETASLLDSNPEALTLVLEMIAGPVNTIQEMMISQVTGEFYSELTPETQQRILSSLF
DAWVKVRSPETVKVIKRTLKHLALESSHVAVELNKCLQTTLSASTVKERKRHRKSDVHGQ
KEEDVFEQLTWQRVVVVLETIQSKKKINGYLQLLPTIFKILSEVLNSDQHTSAEYIKQLL
LSVVDEACQRAINHGLVPDLKKDSSFNIDLIVNAIRTSSNPQTHHKALLVLTTASKIFPE
DLLHKVMSVFTFMGANIMRHDDQYSFHVINRILETVVPALVTACEQREVHVGGQTKEGVI
TMVMQVFVDAYTHIPEHRRLMLFTRLVEIVDGNNFLWRCVLLKMTHEISQSAGETTDGDD
TEMQFNLNLLSQFSMTTQINSIATMISYISGLPVDKPTETVRRKRSGKHSQENISIFPVE
THSAKQLRHFKYRTVKLLLSWCVSSTLVQQLSACEEDEITSGFHHLVQTIMTYICRLTEL
KLEDHTLAKFYRALSHKIYDLLDKVVGLLPERMLLQVIKELMEHSIPNIQRKSMELLNNF
LLQKEQTMEAGLLGVVDKLLHVSASENIEATTTQTALYSLKLLCRRIGANHPQMFIKVLK
MSVEIFRSRAGNQSLQASALLCIAEVCSTLKAHVIAHLSSFMPKIVSCLKDNQLVEGNEL
FLLSMITTVQKVMENLSLFLSPYLQDIVTQICCLSGRQTDVLQKATIQQRLKAIRGTMAT
TLPPRVLLGILPDCYDKLLTLNPNGIQPMMTMLTEHVGHIKKEDLSSHLVQLQGFYLTCL
DVQSHYKGDVEEVENAVIEAIVATVMKLSEATFRPMFYKMFDWATREEDLKHRILVFYKM
ADRLAEKMQSLFTIFAGHIIVHAAQILTDNNKQMTDDDFYGSSKSGRRKSHKLLVYIFDC
LCKCFLYDTEGFVTKERFDTLLQPLVDQLENVDGEPLSKERVSEHLVPCIVQFGAATQDD
SLWKTLNYQILLKTRHSSPEVRYAALIAVDEFHKKLSEDYMALLPETIPFLAELMEDEEE
EVEKMCQSVISQMERTLGEPLQKYF
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttagccaagcagttggagcggttggcggtgccgcatattcgagccgtgtat
agtgaggataaaaggaggaaatctcttttgtttgaccccaaggaggcagcagcactggat
aaagaggccatttatgcactaggtacaaatggaatagcagagttgcaggctcttgatccg
gtgtttgatgagtttcaggaaagtttatttggggaatccactatgtccttccaaagaagc
atacaaacaactgagattaatgcacagattgacgagacaattgaatccttccttcagagg
ttgtctccatactgtctgctcaaaccggcacataaagctctggagtggttgatttatagg
tttgacattgatgtttacaacatggatgcttttatgatatgcttattaccatttcatgaa
agtaaaatatttgttcgagcagttcagcttctgagactgaaatccagaacagccacaaaa
tgggactggcttcttccaattcaggcctctggtgtacacttgccaagacaaactttgatc
aatcactgcaattcaaacaacggattcttctcctttctctgtgacagaatctacaaaacc
atcaaggacaccgtgaggagggatgagggtgacaaactaagagttatcttctccttgtac
atgtctaccgtggtggggatgctggagtttggtggtgcctcagagaacctggtggccgcc
ctcctcccccacctcagtcgtggtatgaagtcaaaggtcacacagtaccgagctgccacg
tatatgattctggctcagctggtttgtaagacgagtctccgacaggacctgttaaaaact
ctgctctctgctctcttcaagaagtcacttttcaaactggagcaggagaccatgacatgt
gcagctttgatgtttcagcaccaggagatcacaagtctgccagctagatctttcaaacac
atctgtcgacaaccagggttaattgagagcttgaaaaccttgacgtctgcaggtaattgt
gatggactgaccatggctttcctggacagacttgttgtaatggctgtgaagcaagactcg
gacatgagtatgagtgaaagcagtgactcggagaacatctcgagcacacctcgttatctg
gatatccttcatgacttcctgtcgagtgttcctctcagtgagagtgtctcagacaacctc
acaaagaaaattattgaaaattatcttctttgtgcaaatgtaattgttaatgatggtgaa
ctggaggagctgagtatgaaacacaggaagaccgttcagctgttggaggacaggtacccc
acttccttagatagagctgtgcaggaatttgtggatggagaggaggaggatgtaaagcga
cagatccaggatttcctaaacctctctgttctgtctgtcaaacaccagcatctgtctgac
attgagggaagtctgactctgtccctcaatcacagaactccagcgatccgggtcaatgct
gtacagcatctgctgaaaaatgctgacaaatgcgatggtgattatgtgtctgaggtgttg
attacaagactggcagacgattcaccagaagtcatggaaacggttctaaaagttggacag
tctttatggagcatgattaatgataccacacagatgtgtacgctgctgggaaagatagtg
ctgaaatgtcagccctggtcgggggtcggaaagatggccctcgggattctgtgtagctgt
gaccccaaattccagccctctgtcatccttatcctttttccacggtttcttctctgcaca
cctgatgacctcaagtttttgaaagatttgtgcgagacagacctagccaagaataaccag
attatcaaatcagtggcccagaagttgaagaaagaagcaggcaagaagaagcattcgacg
gaaaatttagcggagatgtctatagcagtggcaggatggctggctgatgctgtgatgaaa
acctcagactgtgacgagtttctgacccggttacaggacgggggtgatgacacgcgatat
ctgtgtcagctggcgctgttcctgaatgcagccattccgctgatgtcagaaaaaagggac
cagatcaagtggttcggtaatcagctcaaacttctacatcaacttcagcctgggggtgta
ccggagtccgattgggaggaggtcattaccgtggtaacagacacctgtaaaagtttggtg
gctggtcagaaacaggggaattctctaagtctctgtctgttgtctaacctgatacaattg
atccccaccttacagaataaggctgacttttggaattacgatgacgatgccctcgcctgt
tcagtaaggctgtttgattacctcattctacagtccagcacctcggtctgtaggaatgga
tacaggagactagtggcccagttcctgcagcacttctctgacaatgatgtcagaatgaag
tttcttggacttctgtggacacaacattgtaatgacctcagtgaaaggtcaggagtcaag
gtcagcctacagattcaagctcttctgattggaaaacagctactgcatgaaagcaagaaa
gtacaggttccagattcagtgataataaatctgattttggccatgacaagtccgtttatc
agaattcgccagacgaccatggagtgcctaaagcttctgagagacaaagatggtcttggt
cagagtgtgtttgtgccactagtgaaccacatccagaagtgtgagatggagattgtgtcg
gaccaggaatatctgaaacagactgtcacttctgtcctgagtagtggacccaataagggc
aaacggagatctcactctggtaggaagacagacagtagcctggtcagtatgattgtggac
gtggtccagaactctgatactccacaatacatcaggaataacctgcttcagatcacagct
ttacacaacagcaagagtttcctgagtgaccttctaccaacctttcagtctttgttatct
gcctgtctctgtgacaaccccccacccctggctgtcgacagctgcagactactgatccag
aggtggaccttggagacggcctctctcctggattctaaccccgaggctctgaccttggtc
ctcgaaatgatagctggaccagtcaacacaatacaggagatgatgatctcacaggtgaca
ggagaattttacagtgagctgacaccagaaactcaacagcggattctatctagtttgttt
gatgcctgggtcaaagttcggagtccagaaacagtgaaagtgatcaagaggacacttaaa
catttggcattggaaagcagccatgttgcagtggaactaaacaaatgtctgcagacgaca
ctgtcagcttcaaccgtcaaggagcgcaaaagacataggaagtccgatgttcatggacaa
aaagaagaagatgtttttgaacagttgacatggcaacgagtggtggttgtcctggagact
attcaaagcaagaagaaaatcaatggttatcttcaacttttgccaacgatattcaaaata
ctgtctgaggtgttgaattcagaccagcacacatcagctgagtatatcaaacagcttctg
ttgtcagtggtcgatgaagcgtgtcaacgggccattaatcatggtcttgtaccagacttg
aagaaggattcttcgttcaatattgacctgatagtgaatgctatacgaacatccagcaat
cctcagactcatcataaagcccttctggtcctcactacagcctccaaaatattcccagaa
gatctcctgcacaaggtgatgtctgtgttcactttcatgggagccaacattatgcgccat
gacgaccagtacagtttccatgtcatcaatcgtatcctggagaccgtggtgcctgcccta
gtaacagcttgtgagcaaagggaggtccatgttggaggtcagactaaggaaggggtcatc
accatggtaatgcaggtgtttgtggatgcttacacccatatccccgagcatcgccgcctg
atgctgttcacgcgactggtggaaatcgtggatgggaacaacttcctgtggcggtgtgtt
ctgttgaagatgacccacgaaatctcacaatcagcaggggaaacaactgatggagacgat
actgagatgcaatttaacctgaatttgttgtcccaattctccatgacaacacaaatcaac
tccatagcaaccatgatatcctacatatcagggttaccagtagacaaacccacagagacg
gtcagaagaaagagatcggggaaacactcccaggagaacatcagcatcttccctgtggag
actcactctgccaaacagctgaggcacttcaaatacagaactgtcaaactcctcctgtcc
tggtgtgtcagttccacgctcgttcagcagttgtctgcttgtgaagaggatgagatcacc
tcgggctttcaccacctcgtgcagacaatcatgacgtacatttgtcgtctgacggagctg
aagttggaggatcacaccctggccaagttctaccgtgctctgtcccacaaaatttatgac
cttctggacaaggtggttggtcttctgccggagaggatgttgctccaggttattaaggag
ctcatggaacactccattcccaacattcaaaggaagtccatggaactgctgaacaacttc
ctgctacagaaggaacaaactatggaggctggcttactgggggttgtagacaaacttcta
catgtgtctgcatcagagaacatagaggcaactacgacccaaacagctttatacagcctg
aagttactgtgtagaaggataggggccaaccatccacaaatgtttataaaggtgctgaag
atgtctgtggagattttccgttctcgggcagggaaccagtctctccaggctagtgctctg
ttgtgtattgctgaagtctgcagcacactgaaggcacatgtcatagctcacctatcatcc
ttcatgcccaagattgtctcctgtctgaaggacaaccagcttgtggaggggaatgagctg
tttctcttaagcatgattacaactgtccagaaagtgatggaaaacttgtctttgttcctt
agtccttacctacaagatattgttacacagatctgctgcctctctggaagacagacagac
gtgttgcagaaagcaaccattcaacagagactcaaagctatcaggggcaccatggcaacc
actctgcctcctcgggtacttctcggaattttacctgattgctatgataaacttctgaca
ctcaatcctaatggaatccagcccatgatgaccatgctaacagaacatgtcggtcatata
aagaaggaggatttaagtagtcatttagttcagttacagggattctatctcacctgtctg
gatgtacagtcacattacaagggagatgtggaggaggtagaaaatgctgtgatagaggct
attgttgccacggtgatgaaactgtcagaagccacatttagaccaatgttttacaagatg
tttgattgggccacaagagaagaagatctgaagcatagaattctggtattctacaaaatg
gctgacaggttggccgagaagatgcagagtctgttcacgatatttgctggtcacatcatt
gttcatgctgcccagattttaacagacaacaacaaacagatgactgacgatgatttctat
ggctccagtaagtctggtagaaggaaatcccacaagttattggtgtacatttttgattgc
ctgtgcaagtgtttcttgtatgacacagagggctttgttaccaaggaaagatttgacaca
ttgttacaacccctagtagaccagctggagaatgttgatggtgaacctttatccaaagaa
agagtgagtgagcaccttgttccttgcattgtacaatttggtgccgcgacccaggatgat
tcactgtggaaaactctaaactaccaaatactgctgaagacgcgtcactcctcgcctgag
gttcgatatgcagctctgattgctgtggatgaattccacaagaagttgtcggaggactac
atggcattgctgccggagaccatcccgttcctcgcagaactcatggaggatgaggaagag
gaagtagagaagatgtgtcagtcggtaatcagtcagatggagagaaccctcggagagcct
ctacagaaatacttctaa
DBGET
integrated database retrieval system
