Ostrea edulis (European flat oyster): 125669538
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Entry
125669538 CDS
T09123
Name
(RefSeq) ras-related protein Rab-40B-like
KO
K07928
Ras-related protein Rab-40
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125669538
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oed04031
]
125669538
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
125669538
GTP-binding proteins [BR:
oed04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
125669538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
SOCS_box
Motif
Other DBs
NCBI-GeneID:
125669538
NCBI-ProteinID:
XP_048760067
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All DBs
Position
4:63414611..63427805
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AA seq
266 aa
AA seq
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MSSMLNGPGSPKPYDYLLKFLLVGDSDVGKEELLSGMEDGATESPYPSTDGIDYKTTTIL
LDGKRVKLQLWDTSGQGRFCTIFRSYSRGAQGILLVYDITNKWSFDGIARWIKEIDEHAP
GVPKILVGNRLHMAYKRQVSEQTAESYALKNDMAFFEVSPLCDFNVTESFAELSRVALKR
NGMRRTWGTDKVLTLKEIACRCIVANTTIYGIDRLPLPHSLTSHLKSYALTNKTRVRMQS
FVHRKIKYLNPTDTPPAHCRQSCCIS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatgctaaatggtcccggatcgccaaagccttacgattacttattgaagttt
ctactggtaggggacagtgatgtgggaaaggaggagctgttgagtgggatggaggatggg
gctacagaatccccgtatcccagtactgatggcattgactacaaaacaaccaccattttg
ctggatgggaagagggtgaaattacagttgtgggacacctcaggtcaaggacgtttctgc
actatatttaggtcttattcaaggggagctcagggcattcttctagtctatgacattaca
aacaaatggtcatttgatggaatagcgaggtggattaaggaaattgatgagcatgcacca
ggtgttcctaaaattttggtgggaaatcgactccacatggcatacaaaagacaggtgagc
gagcagacagcagagtcgtacgcactgaaaaacgacatggctttctttgaggttagccct
ttgtgcgactttaatgtgactgagtcgtttgcagaactctcgagagtggcactgaagaga
aatggaatgagaaggacatggggaactgataaagtgcttactttgaaggagattgcctgt
cgatgtattgttgctaatactacaatttacggaatagacagactgcctttgcctcattca
ctgacctcacacctgaaatcatatgcattgactaataaaaccagagttcggatgcagagt
ttcgttcatagaaagatcaaatatctcaaccccacggataccccacctgcacattgtcga
caaagttgctgcatcagctag
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