Ostrea edulis (European flat oyster): 125669940
Help
Entry
125669940 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
oed04137
Mitophagy - animal
oed04144
Endocytosis
oed04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125669940
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125669940
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125669940
04137 Mitophagy - animal
125669940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125669940
04121 Ubiquitin system [BR:
oed04121
]
125669940
03029 Mitochondrial biogenesis [BR:
oed03029
]
125669940
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125669940
Membrane trafficking [BR:
oed04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125669940
Autophagy
Mitophagy
Other mitophagy associated proteins
125669940
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
HECT type E3
125669940
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125669940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
125669940
NCBI-ProteinID:
XP_048760757
LinkDB
All DBs
Position
4:72702624..72732807
Genome browser
AA seq
764 aa
AA seq
DB search
MASNEPRRHVQKIRLTVLCAKNLAKKDFFRLPDPFSKISVDGSGQCHSTDTCKNTLDPKW
NQHYDLYVGSKDSITISIWNHKKIHKKQGAGFLGCVQIKYSAIQQLKDTGFQRLDLQRNN
ADDNDNVRGQIVISLISRDRGGSGSGPVNTDAPALIPQDPNELPEGWEERRTASGRVHYV
NHITRTTQWNRPTRPASESVRGNNSSNSIQSANSASSRSNNRAVPNNNNNNNNNEDDCSS
NPPLPRRRSTRHRNYLNRSQLHNAIELPDGYEQRTTQQGQVYFLHTRTGVSTWHDPRVPR
DMSGSEIQDEELGNLPVGWEVRHTGSGRVYFVDHNNRTTQFTDPRLSANIHRLQTRTIEE
SAPVTSRRIIDKENDSPVPKYKRDLVQKLKILKLELQNLQSQGGHCRMEVSREEIFEDSY
RTVMKLRAKDLRKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYARDDIYTL
QINADSGVNPEHLSYFHFVGRIIGIAIFHGHYLDGGFTLPFYKQLLAKPVTLNDLENVDP
ELHRSLVWLLENNIEGVLDHTFSVEHNSFGKFQEYELKPGGRHTTVTEENKSEYVKLYVQ
WRFMRGIEAQFLALQKGFNEIIPQHLLKPFDERELELMIGGLGKIDLNDWKSHTRLKHCT
AESNIVKWFWRSVEEFDDEMRARLLQFVTGSSRVPLQGFKALQGSTGNAGPRLFTIHQVD
ANTDNLPKAHTCFNRIDIPPYENYEKLYSKLSCAVEETCGFAVE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaacgagcctagacgacatgtccaaaagatcaggttaacagtactatgtgcg
aagaatttggcaaagaaggattttttccgtcttcctgatccattttcaaagatcagtgtt
gatggatccggacaatgccattcgacagacacatgtaaaaacacattagatcctaaatgg
aaccagcactatgacctgtatgttggttcaaaagactccattactataagtatatggaac
cataagaaaatccacaagaaacagggggcgggcttcctgggctgtgtccagatcaagtat
agtgccattcagcagctgaaagatacaggatttcagcggctggatctgcagaggaacaac
gctgatgacaatgacaatgtaagaggtcagatcgttatcagtctcatttcgcgggatcga
ggaggttcaggctcgggacctgtgaacacagatgcccctgctcttatcccacaagatccc
aatgaactaccagaagggtgggaagaacgcaggacggccagtggaagagttcactatgtg
aaccacatcaccaggaccacacagtggaataggcccaccaggccagcttccgagtctgtc
aggggaaataactccagtaacagcattcaaagtgctaattctgccagtagccgttctaac
aatcgtgctgttccaaataacaacaacaataataacaacaacgaggacgactgttccagt
aaccccccactaccaaggcgacgctctacaagacatcggaattatctcaatagatcccaa
cttcacaacgcgatagagctgcccgatggttacgaacaaagaactactcagcaagggcag
gtttactttttacacaccaggactggtgtaagcacgtggcatgatcccagagtcccaagg
gatatgtccggatcagaaatccaggatgaagagttggggaacttgcctgtggggtgggag
gtccgccacacagggagtgggagggtgtactttgtggaccacaataacaggactactcag
tttacagaccccaggctctccgcaaacattcatcggcttcagactcgaacgatagaagag
agtgcaccagttacctccagaagaatcattgataaagaaaatgattcaccagtcccaaaa
tacaagcgagacctcgtgcaaaagctgaagattctgaaactggagttacagaacctgcag
tcccagggaggacactgcaggatggaggtctccagggaggagatatttgaggattcttac
agaactgtcatgaagttacgtgccaaagacctcagaaagaggctgatggtgaaattcaaa
ggagaagaggggctagattatggtggagtggccagggaatggttgtacttactgtcccat
gagatgctgaacccctactacggcctctttcagtatgcaagggacgatatttatacactg
cagatcaacgcagactctggagtcaatcctgaacacttgtcttatttccattttgtgggt
cgaatcattggtatagcaatattccacggtcattatttggatggggggttcactttgcca
ttctacaaacagttacttgccaaaccagtgaccctgaatgaccttgagaacgtggatccg
gaacttcatagaagtctcgtctggctacttgagaacaatattgaaggagtgctggatcat
acgttttctgtggaacacaactctttcggaaaattccaggaatacgaactgaaacctgga
gggaggcacaccaccgtaacagaggagaataaatcagaatatgtcaaattgtatgtacag
tggagatttatgagaggaatcgaggctcaatttttagccttacaaaaaggttttaatgaa
atcattcctcaacatctgctgaagccttttgatgagagggaacttgagttaatgattggt
ggtctgggaaagattgatttgaatgactggaagagccacaccaggttaaaacactgcaca
gcagaaagcaacattgtgaagtggttctggcggtcagtggaggagttcgatgacgaaatg
agagccaggcttctccagtttgtgacaggaagttcacgtgttccattacaaggcttcaaa
gctctacaaggttccacaggaaatgcaggtccacgactgttcactattcatcaagtggat
gctaacactgacaatcttccaaaggcacacacatgtttcaaccgaatagacataccacct
tatgaaaattatgagaaactgtattccaagttatcatgtgcagtagaggagacttgtggt
tttgctgtagagtga
DBGET
integrated database retrieval system
