Ostrea edulis (European flat oyster): 125669948
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Entry
125669948 CDS
T09123
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125669948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125669948
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125669948
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
HECT type E3
125669948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
125669948
NCBI-ProteinID:
XP_048760773
LinkDB
All DBs
Position
4:complement(21062381..21098576)
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AA seq
1053 aa
AA seq
DB search
MTGFFGWGRSRDGQLSIGVTDEERVLSPKEIPSLQKLNIKEISCGEKHTLIVTKGGELHS
CGSNDHGELGHSKPRSRAELVSGLSSMQVTQARTGAGYSLVITTAGEVFSWGRNDVGQLG
RGKLSKEEQTKPKLVKTLAMFSVVQIACGTSHSLALTDDGRLFSWGCNRYGQLGLGSSYA
YMDTPQQIACLKGIPIAQIAVGGNHSFILSCSRAVFGWGQNSFGQLGLNDQLDKSHPTLC
KSLRNQKVQYIACGENHTVSLTKEGGVFTFGAGSFGQLGHNSLQDEILPKRVVELMGSVI
SQVVCGRRHTIAYSLSSGKMYGFGVGEGGQLGLGDTMTRNSPFPILSHFLPSSGRRSSQV
MDHDGTLYMVKHLYGGGDHCFLLANTAEAGGEADDFRKTDPSTQITTLTADKSDKIRKLQ
PDVITPSELVDDVLKIFSSSACLNASFLLKNDDHFGCSSRNCGLDMDEVRKLMNRIADAK
NVNIVQQITESIENNLLRSLPPSPPDVEALRVYLILPEFHLFEEPKFFSSLIGPFGKCIV
SLEKAAARVLDLWWGSLKPRFFKRILEIYKKTALWILQLPNLNAASNMEMMIRFESLKHS
LEVLKKLNSVNESNGQIVPYYNFYIPEVMEKIDIRKDYVNWVHRGKILPSPQLHFCDYPF
IFDAAAKSVLLQTDACMQMQTAYEEVQRRNFQNLFLPIDPINPMLVLHVTRHNIVTDTLH
QLSRQGPADLKKPLKVIFLGEEAVDEGGVRKEFFLLLMKEILDPKYGMFKFFEESRLQWF
NPTSFEDKQMFHLIGAVCGLAIYNSTIIGLSFPLALYKKLLNRKTTLDDLMELMPAVGRG
MHDLLDYEEDDIEDVFCLTFEITVDSFGEIKQIPLMEGGSEKQVTKENRQEYIDAYVDYI
FNKSVEDHFREFSNGFHKVCGGRVLELFHPQELQTMVIGNENYDFHEFEANAEYKGEYYR
QHPTIRHFWEVFHELPIQLKKRFLLFLTGSDRIPILGMKAVKMIIQPTHGGNNYLPVAHT
CFNLLDLPKYQDLQTMKEKLCLAIEQTEGFGIV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgacggggttttttggatggggtcgtagtcgtgatggacagctgtctataggggtcacg
gatgaggagagagtgctctccccaaaggagatccctagtctccagaagctgaacattaaa
gagatcagctgtggagagaagcacacactgattgtcaccaagggaggggagctacactca
tgtggaagtaacgatcatggggaactgggacacagtaaaccaaggtcaagggcagagttg
gtgagtgggctgagcagtatgcaggtgacacaggcccggacaggagcagggtacagcctg
gtcatcacaacggctggagaagtgttcagctgggggcgaaatgacgtggggcagctgggg
agaggaaaactgtccaaggaggagcagacaaaaccaaagttggtgaagaccctagccatg
ttctctgtcgtccagattgcctgtggtactagtcacagtttggccctcactgatgatggt
cgtttgttttcatggggttgcaatagatatggacaattaggactgggtagttcctatgca
tatatggacacaccccagcagattgcgtgtctgaagggaatacccatcgcccagatagct
gtgggagggaaccacagtttcattctgtcatgttctagggcagtgtttggatggggtcaa
aacagctttggacaacttggtttaaatgatcaattagacaagagtcatcctactttatgc
aagtccctaagaaaccagaaagtgcagtacatagcgtgtggggagaatcacactgtctca
ctgaccaaggaaggaggggtttttacatttggagctgggagctttggacagttaggccac
aattctctgcaggatgagatcttgccaaaacgagtggtggagctgatggggagtgtgatt
tctcaggttgtctgtggaagacggcacactatagcgtattctctgtcaagcggcaagatg
tacggctttggtgtgggagaagggggacagcttggactcggggacactatgactcgtaac
tctccatttcctatcctgagtcatttcctgcccagttccgggcgtcgttcctcccaagtc
atggatcacgatggaaccttgtacatggtgaaacatttgtacgggggtggagaccattgt
ttccttctagccaacacagcagaggcgggaggagaagcagatgattttaggaagactgac
cccagtacacagataacaaccctcacagccgacaagagtgacaaaattcgcaaactgcag
cctgatgtcatcactccatcagaacttgtcgatgatgttctgaagattttctcaagttct
gcatgtttgaatgcatcatttctactgaaaaatgatgaccattttggctgcagcagtaga
aactgtggtcttgacatggacgaagtccgaaagctgatgaatcgaatcgctgatgctaaa
aacgtgaacattgttcagcagattactgaaagtatagagaacaatcttctacggtcactc
cccccttcaccgcctgatgttgaggctctcagagtttacctcattctcccagaattccat
ctgtttgaagaacccaagttcttctcctctctgattggtccttttggaaaatgtatagtt
agcttagaaaaggcagcagcacgagtattagatttatggtggggctccttgaaaccaaga
ttttttaaaaggattttagaaatatacaagaaaacagcgttgtggattcttcaacttccg
aacctcaatgctgctagcaatatggaaatgatgatccggtttgaaagtttaaagcattca
ttagaggttttgaagaaattaaacagtgttaatgaatccaatggacagatcgttccctac
tataacttttacataccagaagtcatggaaaagatagacatccggaaggactatgtaaac
tgggttcacagaggcaaaatcctaccctcacctcagcttcatttctgtgactaccccttc
atttttgatgcagcagctaaaagtgtccttctccagacagatgcctgtatgcagatgcag
acagcctatgaagaggtacagagacggaatttccagaatctgtttcttccaattgatccg
ataaatccaatgttagtattacacgtaaccagacacaatatcgttacggacacacttcac
caattgtctcgccaaggaccggctgatctcaagaaacctctcaaggtgatatttttagga
gaggaagcagttgatgaaggcggagttcgaaaggagttctttttgcttctgatgaaagaa
atcctcgatccaaagtatggaatgttcaaattctttgaagaatcaagactgcaatggttt
aaccctacatcttttgaggacaaacagatgtttcacctgattggggcagtgtgtgggctg
gctatatacaactccaccatcattggcctcagctttcctctggcactctacaaaaaatta
ctcaataggaagacgactttggatgaccttatggaattgatgcccgcagtagggaggggt
atgcatgacctgcttgattatgaagaagatgatatagaggatgtgttctgtttaaccttt
gagattacagtggacagctttggggaaattaaacagattcctctcatggaggggggatca
gagaaacaagtgaccaaagaaaatagacaggagtacattgatgcctatgtggactatatc
ttcaacaagtcggtagaggatcatttcagagaattcagtaatggattccacaaagtctgt
ggtggaagagtcctggaactgtttcatccacaagaactacagaccatggttatagggaat
gagaactatgatttccatgaatttgaagcgaatgcagaatataaaggagaatattacaga
caacatccaactatccgacatttctgggaggtcttccacgaattacccatacagctcaaa
aagaggtttctattgtttctgactggaagtgaccggatccctattttgggaatgaaagct
gtcaaaatgatcatccagcccactcatggtgggaataactacctcccggtggcccacacg
tgtttcaatcttttagacctccctaaatatcaggacctccagaccatgaaggaaaaactg
tgtttggccatagagcagacggaaggatttggcatagtgtag
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