Ostrea edulis (European flat oyster): 125669971 Help Entry 125669971         CDS       T09123                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism oed  Ostrea edulis (European flat oyster) Pathway oed03030   DNA replication oed03410   Base excision repair oed03420   Nucleotide excision repair oed03430   Mismatch repair Brite KEGG Orthology (KO) [BR:oed00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     125669971    03410 Base excision repair     125669971    03420 Nucleotide excision repair     125669971    03430 Mismatch repair     125669971  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:oed03032]     125669971    03400 DNA repair and recombination proteins [BR:oed03400]     125669971 Enzymes [BR:oed01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      125669971     6.5.1.6  DNA ligase (ATP or NAD+)      125669971     6.5.1.7  DNA ligase (ATP, ADP or GTP)      125669971 DNA replication proteins [BR:oed03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     125669971  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      125669971 DNA repair and recombination proteins [BR:oed03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      125669971    NER (nucleotide excision repair)     Other NER factors      125669971    MMR (mismatch excision repair)     Other MMR factors      125669971 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  125669971 NCBI-ProteinID:  XP_056017294 LinkDB All DBs Position 4:21499962..21545573 Genome browser AA seq 867 aa AA seqDB search MQKSITSFFSSPKPKKEDTETKRSDFDNESKECAPLKQSNGSPIKDSPVKVSRKKRCRII ESDEEEDVCADEQENQKNSPEPVKVNGVSEEKKTSDVVEKLESPAKSPFGLPVRRTARKS MTSPNSTKKNLSYSPVREPSTKKSKVEVKEPKVEVKDQEEEVKEPKEEVKDPKVEVKAGD AKDSKTKEKTEEKSDTEDTQIEVKEEIVEENKEEEMEVEETKEVKREVKKVTTSKSTKKT PKSKKATSKQVDKTQSKEQSQTSKEEKDTKTEADSGKKKLHSFFAPKTEQKTEDSSSEGM KTSDKSVKNLSSIKKEEDSGYNPAKTNYHPLDDAVWKHADKVPYLALAKTFEAIENISGR LKTIEILSNFFRSVMALSSNDLLQCVYLCLNKLAPAYEGLELGIGETVLMKAIAQATGRG IDKVKADAQEKGDLGLVAETSRSSQRTMFTPAKLTVPAVFSKLRDIAGMSGNSAMAKKIE KIKGMFVACRQCEARYLIRSLGGKLRIGLAEQSVLTALGNAVFRTPPGQDFPPEVLDAGK GLGADSLKKKMEECALIIKSTYCECPSYDAIIPALIKYGIQELPNHCKLTPGVPLKPMLA HPTKGVSEVFKRFDEADFTCEYKYDGERAQIHILENGDVHIYSRNSENNTSKYPDIIARI PKVKADTVTSCVIDSEAVAWDAEKKQIQPFQVLSHRKRKDADASNIKIQVCVYAFDLLYL NGKSLVKEPFRKRRELLHSSFREVEGEFVFAKSMISSNTDEIAEFLDDSIKGNCEGLMVK TLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLLVMGGFLGTGKRTGRYGGFLLACYDE ENEEFQSICKKYLNQLIKYHEQSHNAK NT seq 2604 nt NT seq  +upstreamnt  +downstreamnt atgcagaaatctattacgtcttttttctcgtctccaaagcccaaaaaggaagacacagag acaaaacgaagtgactttgataatgaaagtaaagagtgtgctcccctgaagcagagcaat ggatcacctatcaaggactctcccgtcaaagtgtccaggaagaagagatgtcggatcatt gagagcgatgaggaagaggatgtatgtgctgatgaacaggagaaccagaaaaatagtcct gaaccagtaaaggtcaatggggttagtgaagaaaagaaaacatcggatgttgtggaaaag ttagagtcccctgcaaaatcaccctttggtctaccagtcaggagaacagcaagaaaaagt atgacatcacccaatagcacaaagaaaaacctgtcatacagtccagtgagggagccctct accaagaaatcgaaagtagaggtcaaggaaccgaaagtagaggttaaagatcaagaagaa gaggtcaaggaaccaaaagaagaggtcaaggatccaaaagtagaggtcaaggctggggat gcaaaagactctaaaactaaagagaaaacagaggaaaaatctgacacagaggatactcag atagaagttaaagaggaaattgtggaggaaaacaaagaggaggaaatggaagtggaggaa acaaaggaagtaaaacgagaagtaaaaaaagtaactacatcaaaatccaccaagaaaact ccaaaatccaagaaagcaacatcaaagcaagtggacaagactcagtccaaggaacaaagc caaacttcaaaggaagaaaaagatacaaagacagaagctgattctggtaaaaagaagctc cacagtttctttgcaccaaagactgaacaaaaaactgaagattcctcaagtgaaggaatg aaaacaagtgacaaaagcgtgaagaatttatcgtccatcaagaaggaggaggacagcgga tacaatccggccaagacgaactatcaccccttagatgacgcggtgtggaaacacgcggac aaggttccttacctggccttggcaaagacctttgaggcaatagaaaacatctctggaaga ctgaagacaattgaaatcctcagtaactttttccgttctgtgatggccttgagttctaat gaccttttacagtgtgtgtatctctgtctgaacaaactcgccccggcgtatgagggactg gagctggggataggggagacggtactgatgaaagccatcgctcaggcaacgggtagaggc attgacaaagtgaaagctgatgcccaggaaaaaggtgaccttggactggtggcagagaca agcaggagctctcagcgaacgatgttcactccagccaaactgacagtaccagccgtgttt agtaaactgagggacatagcaggaatgtccggtaattctgctatggcgaaaaagatagag aagattaaaggcatgtttgtggcgtgtcggcagtgtgaggctcgctacctgattcgctcc ctcggaggaaaactcagaatcggtctagcagaacagagtgtgttaacagccctgggaaat gcagttttcaggacgcctccaggtcaagattttccaccagaagtgttagatgctggaaaa ggcctgggtgctgattcccttaaaaagaaaatggaggaatgtgctctcataatcaaatca acctactgtgaatgtccaagttacgacgctattataccggccttgattaagtatggtata caagagttaccaaaccactgcaaactgaccccaggtgttcctttgaagccaatgttagct catcctaccaaaggagttagtgaggttttcaaacggtttgatgaggcggactttacctgt gaatataaatatgatggagaaagagcacagatacacatccttgagaacggtgatgttcac atctacagcagaaactcggagaacaataccagtaaatacccagacatcatcgctcggatc ccgaaggtgaaggccgatactgtaacctcctgtgttatcgactcggaagctgtcgcgtgg gacgcagagaaaaaacagatccaaccattccaagtcctcagccacaggaaacggaaggat gctgatgcctcgaatattaagatccaggtgtgtgtgtatgcatttgaccttttgtacctc aacggaaaatctctggtgaaggagcctttcaggaagaggcgagaacttctccactcgtca ttcagggaagtcgagggagaatttgtgtttgccaaatccatgatttcatccaacacagac gagattgccgaatttctggatgactccattaaaggaaactgtgagggtcttatggtgaaa accctagacgtagatgctacgtatgaaattgccaagaggtctcacaattggttgaagctg aagaaggattacttggatggggtaggagacacattggatctgctcgtgatggggggtttt ctggggacaggaaagagaactggacgctacggaggattcctcctggcctgttacgatgag gagaatgaagagttccaatccatatgcaagaagtatcttaatcagctgatcaagtatcat gaacaatcccacaatgcaaagtaa

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