Ostrea edulis (European flat oyster): 125669975
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Entry
125669975 CDS
T09123
Name
(RefSeq) protein Tob1-like isoform X1
KO
K14443
protein Tob/BTG
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125669975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125669975
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125669975
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125669975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
Motif
Other DBs
NCBI-GeneID:
125669975
NCBI-ProteinID:
XP_048760817
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Position
4:complement(21578407..21582192)
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AA seq
433 aa
AA seq
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MITVISHLKTALTSSVLPIRSDKDSTKTSEDQRGLSFRYKKKPPIDHSVNYKMHVEVSVA
LNFVISYLYNKLPRRRVDMLAEELERGLKKKFQGHWYPDKPFKGSGFRCVRMNGEKVDPV
FIHAASECGLSLEEVKTYLPAELTIWIDPAEVSYRIGEKGQIKILYSDRKDESTEETADR
EVQAAGRTFNPDAQCFKPIDNLSASLNNLCLSPVMLSPSSPTSSKGWSASASTSPSGSLF
SSTVSRPTPPATHVSKENAVPRFTAASFAQTKFGSTKLKTNAKRPTRLSPTELGNYFRQR
SSVLHPPATGYCSPQRPRSLSPRDPRLEFYMDQKNRVFLSQQQLHHQQQHLLHSPQHGSS
PPSPLSESGVVRSPMSSQGYASGHFNDFMSTSSPLTSPANSATVSPEADKSFMDGINVNL
SYNAQFPHMLLAN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgataactgttatctcgcatctgaaaacagcgctgacatcaagcgttcttccgattcgt
agtgacaaagacagtacaaagacgtctgaagatcaaaggggattgagttttagatataaa
aagaaaccacccattgaccactcagtaaactacaaaatgcacgtggaagtatcagttgct
cttaactttgtcatatcttatttgtacaataaattaccaagacgaagggttgacatgctg
gcagaggaattggagagaggattgaagaaaaagtttcaaggtcattggtatccagacaaa
ccctttaaaggttcgggcttcaggtgcgtacgaatgaacggcgaaaaagtcgaccctgtg
tttatccatgccgcgtctgagtgcggattgtctctggaggaagtcaagacatatttgccc
gcagaacttactatctggatagaccccgcagaagtttcatatcgcatcggcgaaaagggt
caaataaaaattttatacagtgatagaaaggatgagagtactgaagaaaccgctgatcgc
gaggtccaggcagcgggacgtacattcaatcctgatgctcagtgtttcaaaccaatcgac
aatttgtcggcctctttaaacaatctctgtttatcgcctgtaatgttgtctccgtcatca
ccgacgtcatcaaaagggtggtccgcgagcgcgtccacttcaccatccggatccctgttc
agttctacagtatccagacccacgccgccagccacacatgtgtcaaaagaaaacgctgtt
cctcgatttacagcagcatcgtttgcccaaacaaaatttggatccacaaaactgaaaacc
aacgccaaaagacccacgcgtctctcgccaacagagctaggtaactacttccggcagcga
tcttcagtgctccaccctcctgctactggctattgttctccacaaagaccacgctcctta
tctccaagagatccacgcctcgaattttacatggatcagaaaaaccgtgttttcctgtcc
cagcaacaactccatcaccaacagcaacacctgcttcactcaccacagcatgggagtagt
ccgccctcaccactcagtgaaagcggggtcgtcagatcaccaatgtccagtcaaggctac
gcgtctggtcacttcaacgactttatgtcaacttcgtctccactgacatctcccgcaaat
tccgcaaccgtgtcaccggaagcggataagtcgtttatggatgggataaatgtgaacctt
tcctacaacgctcagtttcctcacatgctgttggctaactag
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