Ostrea edulis (European flat oyster): 125670188
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Entry
125670188 CDS
T09123
Name
(RefSeq) nuclear pore complex protein Nup155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125670188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125670188
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125670188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
RasGEF_N_2
VIR_N
Motif
Other DBs
NCBI-GeneID:
125670188
NCBI-ProteinID:
XP_048761170
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Position
4:16863974..16893925
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AA seq
1344 aa
AA seq
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MSSFMGSPQFSHQDWLEGAARQVDRQLQDERSYQELSDQLKVPVHNQPSLSGLNELDYPS
LPEAGISIDSLCEISNVKRVPLPPELVEQFERMQCNCMMGLFPTIERAWLTIDSDIFVWR
YEDGTDLAYFDGLNETILSAALVKPKQGIFQPHIQYLLCLATPVDIVLLGVSFSGPYDNM
TADSRSGEMHLLPEPLFSIPTDNTYIVSITGAPNGRIFMAGKDGCLYELAYQADDGWFSR
KCRKINHSTSALSFLVPSFLNFSFSEDDPLLQLSLDDSRNILYACTEKGTIQVFDLGQDG
RSMSRVASIPLNTTVHSAALIARTVERSNFKPIVHISALTKSESTNIHLVAVTKTGVRLY
FTTNPFGGNKGRPGMLSLVHVRLPPGFSASTTVHKPQNVHMAYHKKGTLLLVASQSEDSD
ILWTVSNDSFPFQGQLMEAHSTIAVDGRTWAMCEVTSGEPNVVVDKPDPPAVVTQHSETP
RKFILLSAQGSNIFMKMRPVDQLRQLLIDCQGPDADEVKAFFRLHKIEQACSTCLILACS
RIAADQQVATWATMAFFMYGGEPQLNFTGSAMGTDGRMMPSNLGAMGTCLHQTSTPAPGM
GHPYFHPSMTPGPNITQEIIFSGKHNGICLYLARILGSIWEINVTMDYPRQSSQGITNYL
TSRINGDDLNRILENVRGLSDFVEFNSRFDTGPSEGMMSQVPFSPHMMGHMDEQGRKKLQ
AEAQKMEKVSLQHIQELIRRVEEVLGLWRILVDHQLHIIVSTLSKDQQNQLRGMSFKQLS
THAAGKEMCASLITCLITRYLDDNATIDAISSRLREVCPSLYSSDDATCSKANELLQAAK
INKNQNEKMTQLNEALKLYKEVSQPLQLHVVCNQLAVVHFYTGIVDLCLALSKKRDPQNL
ALHYYKSGEPHDDIQGMTSYMSRMECYNCITDTLAYLLSASVSHPHAPSVPKSPGPPPQP
DPNRMTTYDAEKHKEEVFRMSLKSDDEMFHVALYDWFFHANLTEKLLEVQTPFIEPYLKR
KATCPSEAIGALDMLWKHYEKCRNFSAAARILSRLSERLGTDMNLQQRIEYLSRAIMCAK
SSSTRTSSAVEGEFLHELEEKMEVARLQLQVQRSLSKLPSNILDVQYALTSLDSELMDLT
RLYEEFADRFDLSECKLAIVHCAGLYDGALIENLWQSIIDKEIEATTNMNPNSRITNLQN
KLLPIGRLYIKSDRYFPIAFIVKYLEQRSCDLSLNTKWTFLLMLDIGVPPAKLLEIYDRL
FKSRDPYWQQVQKPLRLLEVLHDLLSHICENRTIIPAFERRSFTTLCLDSVSNYLVELQT
MMNTPQQSSVVSHFKRLQAQLERF
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatttatgggctcgccccaattttcacaccaagactggctagagggtgcagcc
agacaggtggaccgacaactccaggatgaaagaagttaccaggaactgtcggaccaactc
aaggtgcctgttcacaatcaaccaagcttgagtggattaaatgagctcgattatcctagt
ttaccagaagctgggatttccattgacagtctgtgtgaaattagcaatgtgaaaagggtt
cccctacccccagagctggtggaacagtttgaacgaatgcagtgtaattgcatgatgggt
ctttttcccactattgagagagcctggttgactatagacagtgacatttttgtatggaga
tacgaagatggcacagacctggcatactttgatggactgaatgaaacaatacttagtgct
gccttagttaaaccaaaacaaggtattttccagccacacattcagtaccttttgtgcctt
gccactcctgtggacatagtcctattgggcgtcagtttctccgggccatatgataatatg
acagcagacagtaggagtggagaaatgcacctcctcccagagcctctgttctctatccct
acagacaacacatacattgtcagcatcacaggggcccccaatgggagaatcttcatggct
gggaaggatggctgtttatatgaattagcttatcaggcagatgatggctggttcagtaga
aagtgcagaaagattaaccactcaacaagtgctctgtccttcctggtgccttcatttctc
aacttttccttcagtgaggacgacccgctgctacagctgagtctagatgactccagaaat
atcctgtatgcctgtacagagaaaggaactattcaggttttcgacctgggacaagatgga
cggagtatgagtagagtggcttccataccactaaacactacagttcacagtgcagccctc
atcgccaggactgttgagagatccaacttcaaacctattgtacatatcagtgccttgacc
aaatcggagtcgacaaatattcacctcgtggctgttacaaaaacaggagtgcgattgtat
ttcacaacaaacccattcggtggcaacaaaggacgtcctggcatgctgtctctggttcat
gttcgacttcctccagggttctctgcatccacaactgttcataaaccgcaaaatgttcac
atggcttatcacaaaaaaggaactttgttactggtggcctctcagtcggaagacagtgat
atactgtggacagtcagcaatgactcattcccatttcaagggcagctcatggaagcacat
agcactattgcagtagatggccggacctgggcgatgtgtgaagtcacctcaggagagcca
aatgttgttgtagataagccagatccccccgctgtggtcacccagcactcagagaccccc
agaaagtttattcttcttagtgcccaggggagtaacatttttatgaagatgaggccggtg
gaccagctcagacagctgttgattgattgtcagggtccagatgctgacgaagtcaaggca
ttcttcagattacataagattgaacaggcttgctccacatgtcttattctggcttgttca
aggatagcggcagatcaacaggttgctacgtgggccaccatggccttctttatgtatggt
ggtgaaccacagctgaattttactggatccgccatgggaacagatggaaggatgatgcca
agtaacctgggagcaatgggtacctgtcttcaccagacatcaacaccagctccaggcatg
ggtcatccatacttccatccttccatgacacccggtccaaatatcacacaggaaattata
ttctcagggaaacacaatggcatttgtctatatctagccaggattctcgggtcaatatgg
gagatcaacgtcactatggattatcctcgtcagtcctcacaaggaatcacaaactacctt
accagcaggattaatggtgatgatctgaacaggattttggaaaatgtccgaggactatca
gactttgtagaatttaattccaggtttgacaccggcccatcagaaggcatgatgtcacaa
gttcctttttctccacacatgatgggacacatggatgagcaaggtcgcaaaaaattacaa
gctgaagctcaaaagatggaaaaagtgtccttgcaacacatccaggaactgatccgacga
gtggaggaggtgctaggattgtggagaatccttgtggatcaccagctccacatcattgta
tccactctctctaaggatcaacaaaatcagttaaggggtatgagtttcaaacaactttcc
actcatgcagcaggaaaagagatgtgtgcttctttaatcacctgtctaatcactcgctat
ctggatgacaatgccaccattgatgccatcagtagcagactacgagaagtttgtccctct
ctgtacagctcagatgatgccacatgttcaaaggcgaatgagctcttgcaagctgccaaa
atcaacaaaaatcagaacgagaagatgacgcagctaaatgaagcactaaaactatacaaa
gaggtgtcccagcccctccagctgcatgtggtctgtaaccagttagctgtggtccacttt
tacaccggtattgttgacctatgtttggccctgtccaagaaaagggatccccagaatctg
gccctacattactacaaaagcggtgaacctcatgacgacatccagggcatgacaagttat
atgtccaggatggaatgttacaactgtatcacagacactctagcctatttattatcagca
agtgtctcccatccccacgctcccagtgttcccaaatctccgggtccaccccctcaaccg
gacccaaataggatgaccacgtatgatgcagagaaacataaagaggaggttttccgcatg
tcgctgaagtcagatgatgagatgtttcatgttgctttgtatgactggttcttccatgcc
aacctaacagaaaagttattagaggtacaaacaccgttcatcgagccatatttaaaaagg
aaagccacctgtccatcagaagccataggagctttggacatgttgtggaaacactacgag
aaatgtagaaacttttcagcagccgccagaattctatctaggctctctgaaagactaggg
actgacatgaacctgcaacagaggattgaatacttgtccagagccattatgtgtgccaag
agttcatctacgagaacaagctctgctgtagagggcgagttcctgcatgaactagaggag
aaaatggaggttgctcgcctccagcttcaggttcagagatccctcagtaaattacccagc
aacattctggatgttcagtacgctctcacgagcctggactcggaactcatggacctcacc
aggctatatgaggagttcgcagacagatttgacctctcagaatgtaaactggccattgtc
cattgtgcgggattgtatgacggagctctaattgaaaacctttggcagagcattatagat
aaagaaattgaagcaacaactaatatgaatcccaattcgagaataaccaatctgcagaac
aagctgttgccgattggaagactgtacattaagtcggaccgatacttccctatagctttt
attgtgaagtatctggaacaaaggagctgtgatctaagtttgaacacaaagtggacattt
cttctcatgttggacattggtgtaccgcctgcgaaattgcttgaaatttatgaccgattg
tttaaatcaagggatccatattggcaacaagtccagaagccattgagattattagaagtt
cttcatgatttgttgtcacacatttgtgaaaatcgcaccattatcccagcttttgaaaga
cgttccttcacaactctgtgtttagattctgtgtctaactacctggtggaactgcagacc
atgatgaatacgccacaacagtcttctgtagttagtcacttcaaacgtctgcaggcccag
ttagagaggttctga
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