Ostrea edulis (European flat oyster): 125670487
Help
Entry
125670487 CDS
T09123
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00280
Valine, leucine and isoleucine degradation
oed01100
Metabolic pathways
Module
oed_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125670487
Enzymes [BR:
oed01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
125670487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BSH_YknX
ATP-grasp_3
BSH_CusB
BT_MCC_alpha
BSH_CzcB
RimK
ATPgrasp_ST
BSH_ALG44
BSH_RND
GARS_A
CoA_binding_3
Motif
Other DBs
NCBI-GeneID:
125670487
NCBI-ProteinID:
XP_055996649
LinkDB
All DBs
Position
1:100058971..100073206
Genome browser
AA seq
705 aa
AA seq
DB search
MFPKLKLCTRFSSTVHQLRKLSSKDVTPINKILIANRGEIACRVIRTARRLGIQTVAVYS
DADRESLHVAMADEAFHIGPPAAAQSYLKQEQIIQVAKQSGAQAIHPGYGFLSENTEFAE
LCGKEGVIFIGPPASAIRDMGIKSTSKSIMAGAGVPVIEGYHGEDQSNETLKREAAMIGY
PVMIKAVRGGGGKGMRIAMNAEEFESQLESARTEGRKSFGDDVMLLEKFVQTPRHVEVQV
FGDKHGNYVYLFERDCSVQRRHQKIIEEAPAPDLTEEVRRAIGEAAVRAARAVDYVGAGT
VEFIMDKDKKFYFMEMNTRLQVEHPVTEMVTGTDLVEWQIKVAGGEFLPVTQDEIKLRGH
AFEARIYAEDPNNAFMPGAGPLDYLRTPKPDENTRIETAVREGDEVSVHYDPMIAKLVVW
SDDRPSALRRIRSALSQYQVLGLSTNIQFLMDLAGHPEFEAGNVHTDFIPQHYDQLFPDR
GLSDKTICQAAISLMLIEQEKTHQHACSTLDPFSPFSALSSVRINSSAVHKISLQDGDTK
YEIAIQANSDRSYSVMFGEKSYQVTGEIQDEGEGIKLTCSVDGVFSKAEVVINNNTLHVF
TTDGRCDLQMPVPSYLKSKDESGFSQDVLAPMPGVVEKVLVSPGTQVQKGDPLVVMIAMK
MEYIIRAPKDAKVQTILYNEGETVAKGTTLVHFEEEQSKQETDPK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctaagttaaaactttgcacaagattttcatcgactgtacatcaactaagaaaa
ctaagcagcaaagatgtaacccccattaacaagatcctgatcgccaatcgcggggaaatt
gcctgtcgtgttattcggactgctcgtcgtctcggtatccaaacagtcgccgtgtacagt
gatgccgatcgagagtctcttcatgtggcaatggcagatgaggccttccacattggtccc
ccagcagcagctcagagctacctcaaacaggagcagatcatccaagtggctaaacagtca
ggggctcaggcaattcaccctggatatggatttctgtcggagaacacagaatttgcagag
ctgtgcggtaaagagggagtcatttttattggaccccctgcttcagccatcagagatatg
ggcattaaaagtacatcaaagtccatcatggctggagcaggagttcctgttatagaaggt
taccatggtgaggaccaatcaaatgaaacattgaaaagagaagcagcgatgattggttac
cctgtgatgatcaaagcagttaggggaggtggaggaaagggaatgaggatcgctatgaat
gccgaggagtttgaaagtcagttggagtcggccagaactgagggccggaaatcttttggt
gatgatgtgatgctgctggagaaatttgtgcagacaccaagacatgtggaggtgcaggtg
tttggagataagcatggaaattacgtttacctgtttgagagagactgtagtgttcagagg
agacatcagaaaattattgaggaggctcctgcgcctgatctcactgaagaagtacggcga
gctataggagaggctgcggtgcgtgccgctcgagctgtggattatgttggggctggaact
gtcgagttcatcatggacaaggacaagaaattctactttatggagatgaacaccaggtta
caggtggagcacccagtaacggagatggtaacaggcacggatctagtggagtggcagatc
aaggtagctgggggagaatttctaccggttacacaagatgaaatcaaactgagaggacat
gcatttgaagctcggatttatgctgaagatccaaacaatgctttcatgcctggagccggt
cccctagactacctcagaactcccaaacctgatgagaatactcgtatagaaacggcagtc
cgggaaggagatgaagtgtctgttcattatgacccaatgattgccaaactagttgtctgg
tcagatgaccgtccctctgcactcagacgaatccgatcagcactctctcagtatcaagtg
cttggactaagtactaacatccagtttctgatggacttggctggtcaccctgaatttgag
gctggcaatgtccacacagactttataccacagcactacgatcagctgtttccggaccgc
ggcttatctgacaaaaccatctgtcaggcagctatttctttgatgctgattgaacaggaa
aaaacccatcaacatgcttgtagcaccttagaccccttctctccattttctgccctatca
tctgtgagaataaattcatcggcagtccacaaaatatcacttcaggatggagatactaag
tatgagattgccattcaggcaaactctgacagaagctacagtgtgatgtttggagagaaa
agttatcaggttacaggcgagatacaggatgagggggagggcattaaactgacttgcagt
gtggatggggtcttctccaaggctgaagtggtgatcaacaacaatacgttgcatgtcttt
accactgatggcaggtgtgaccttcaaatgccagttccctcatatctcaagtcaaaggat
gaatcgggcttttcgcaggacgtcttggcccctatgcctggagtggtggaaaaagtgttg
gtttctccaggtacccaagtgcaaaaaggtgacccactggtggtcatgatagccatgaaa
atggagtatataatacgggctccaaaagatgccaaagtacaaaccattctgtacaacgag
ggagagactgtggccaagggaacaactctcgttcattttgaggaggaacaatccaagcaa
gagacggacccgaaataa
DBGET
integrated database retrieval system
