Ostrea edulis (European flat oyster): 125670789
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Entry
125670789 CDS
T09123
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125670789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125670789
03036 Chromosome and associated proteins [BR:
oed03036
]
125670789
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125670789
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125670789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
125670789
NCBI-ProteinID:
XP_048762132
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Position
4:complement(51727226..51771672)
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AA seq
653 aa
AA seq
DB search
MAEREREIQTCLISDSSCQYGLQSVWGTGNQLFVFPGRNPVLYSERRPATGKREVIQEVQ
WDIDLHHPVLRKMVNDSHNIFVTLQRKATQLNGAALHEQILKSSRHYRATQKAYLKDLDE
MIESTRDEDQRQQYTDQMKLLDMSELIWSLCEILFIESPVGDLVIPQLLEWLKIHFTMAE
RMFGELVREEQPEHKSTYWATIFRLVLQGQVERAWRLLSLHSASQTEDFQTLISLLKRMP
LLTHLYRGSSVTEFDMKWRHWRDDCQRNYEEQKFSINANLETVVRILCGEDAVFSELKEF
CDPWYHMLISKALYQDPTIKACDLHYYVQGCQDEYRNSTRLGELDNILLSAIESDVYQVI
KDSRTVFSNGWFVAHLTDLLQHCGQLEAYKLQFGADLREFLLLEYASSLMSHESLWIVGV
SYLDHCAEFGRKYLELFLDRIPVNSEKKANKVLKICEDRKMTEQAKSICKVMGMRCIKNK
RLGAALTWFLRSKDVGFATVLAEKFLLEYSESGEFTNLDLIDHLGPSMLLSNRLTFLGKY
REFHKLYSEGDYLAAAELLLALLQARLAPKQFWITLLIDALPLLERMELIFNSQQTYELM
QCLEELTTEYRLEKKTDILGFTEARKEQLDVLKLALTKNLAKAILQEGTVKVV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgggaaagggagatacaaacatgtttgatttcggactcttcatgccagtat
ggattgcaatcagtttggggcaccgggaaccagttatttgtatttccaggcagaaaccct
gttctatattcagagagaagaccagccactggtaaacgggaagtgattcaggaagttcaa
tgggacattgatctgcatcaccctgttctcaggaaaatggtcaacgattcacacaatata
tttgttacccttcagcgcaaagcgacccagttaaatggagcagcccttcatgaacaaata
ttaaaatcaagcagacactacagggctacacagaaagcttacctgaaggatttggatgaa
atgatagagagcacacgagacgaggaccaaagacagcagtacacagatcagatgaagtta
ctggacatgtctgagctcatctggagtctgtgtgaaatcctcttcatagagagccctgtt
ggtgaccttgttattccccaattactggagtggctcaagatccactttacgatggcagag
agaatgtttggtgagctagtaagggaggaacaaccagaacacaaatctacatactgggct
acgatatttcgactggtgctacaagggcaggtagagagggcatggcgtctgctctctctt
cattcagcaagccagacggaggatttccagactctgatcagcttactgaagagaatgcca
ctgttgacacatttgtacagaggtagttctgtaacagaatttgacatgaaatggcgacac
tggagagatgattgtcaaagaaactatgaggaacagaaattctcaatcaatgcaaatcta
gaaactgtagtccggatactgtgtggtgaagatgcagtattcagtgaattgaaggagttt
tgtgacccctggtatcacatgttgatatcaaaagccctataccaggaccccaccatcaaa
gcatgtgatctacattattatgtccagggctgtcaggatgaatacagaaacagcacaaga
ctgggagagctggacaacattctcctgtcagctatagagtcagacgtgtaccaagtcatc
aaggatagcaggactgtgttcagcaatggttggtttgtagctcatttgacagatcttcta
caacactgtggacagttagaggcttacaaattacagtttggagctgacctgcgggaattt
cttctgctagaatatgcaagttcccttatgtcacatgaaagtttgtggattgttggagtt
agttaccttgaccattgtgcagaatttggaaggaaatatctggagttattcctagatcgc
attccagtaaattctgagaagaaagcaaacaaagtacttaagatctgtgaggaccgtaaa
atgacagaacaagcaaaaagtatctgtaaagtgatgggaatgaggtgtattaagaacaaa
agattgggagctgctcttacatggtttttgaggtcaaaggatgttggatttgctacagtt
cttgcagagaaatttcttcttgagtacagtgagagtggagaatttacaaatcttgatctc
atagatcatttaggaccttccatgttactaagcaacaggctaacctttttaggaaaatat
cgtgagttccacaagctttatagtgagggggactacctagcagctgctgaacttcttctg
gctctgttacaagctcgtctggctcccaaacagttttggataacattgttgattgatgca
cttccattactggaaagaatggagctcatctttaacagtcaacaaacatatgaactcatg
cagtgccttgaagaactgaccactgaatatagactggagaagaagacagatatcttggga
ttcacagaagcaaggaaagagcagttggatgttttgaaattagcactaactaagaatttg
gccaaagccattttacaagaggggacagtgaaagtagtctag
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