Ostrea edulis (European flat oyster): 125670919
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Entry
125670919 CDS
T09123
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed02010
ABC transporters
oed04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125670919
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125670919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oed02000
]
125670919
Transporters [BR:
oed02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125670919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
NSP2-B_epitope
Motif
Other DBs
NCBI-GeneID:
125670919
NCBI-ProteinID:
XP_056018654
LinkDB
All DBs
Position
4:complement(42224424..42269209)
Genome browser
AA seq
2353 aa
AA seq
DB search
MGFWKQLGLLLWKNYTLRKRQKFRLLAEIVTPTILLLVLVLVRTRPDLQEYNHECHFDGK
AMPSAGVLPFLQSFFCTFNNTCHETGTQDEQPGHVGNFDKSILTNLVFDIEEVLNSNIDR
DLISDLLEDWEIITQLMNKISSGSTTGAIRIGTILGNPQNISDVVKTKEINLSIDVLINV
MNATLDFNQLNKPSLNKIFKDFDTCPDSQHRQPAALEIWQRICDTGSVLHTINFHSDEAK
KQSREELCNLEKSDLEHMYQAFRAQFSIQRFFIQMFKFIFVNTMKIPNVQDIYKRFKKLI
SDLTSLKELDVNKMEKFFRDMNKKKMNSTLIIQNLGDFVCGANSFLRMQSKRSEDLFERF
RSHGRLSRGESDSNSATNGYGKDRPLCRDVVNFLNEDVQTQILWKNLRPVVMGRITYAPD
IPSVRKVIEKANQTFSDFARSVQLAKDWEGYIDSVQKHFAESSTYDILRRFSGSCLCDLV
ENITMTAFGKTKSVGICRFTKTLLSGSPDIGSYNWRDIIKFTKSLARVLADYGECMVFDK
FVGFATEEEMLVESAKMVENNTLWGALVFDVSNETHMYSLPSHVAYKIRMDADRVDTTDR
VLDQVYKPGPRRTPGKQTKFLSYGFAYLQDMVEHAIIKIQTGSDKDVGVMVEQFPYPCYI
RDSFTYAIEIVLPLLLVLAWILPVAMLCKNIVYEKEKRLKEVMRMMGLGNGVHWLAWFIN
AFVVMMFTMGLLVVLLKYGNVIKYTDPTILLFFFTTFAVATIMQCFFFSVLFHQANLAAC
SSGFLYFTLYIPYVLAKRWQEVLHLPEKMAICLSSSIAFGFGCFKISQFEQQAVGVQWNN
IWDSPMTGDDFSMMHIIIMMCVDSVIYGLLTWYIEAVFPGQYGIPRPWYFFVLKSYWCGG
VSEKDSLEEGLSPYFDPEGKPVEDEPQDRTLGVAIRNLRKVYSEGNKVAVNGLSLNFYEG
QITSFLGHNGAGKTTTMSILTGMFPPTDGTAYIYGKDIRKDIDEIRQSLGVCPQHDLLFQ
FMTVKEHLWFYSQLKGLSLQETANEINPMIRDIGLGHRKHAFPDMLSGGMKRKLSVAIAF
VGHVKTVILDEPTAGVDPYSRRSIWELLLKYKEGRTIILSTHHMDEADVLGDRIAIISQG
RLCCCGSSLFLKSQYGNGYYLTIVRNLNEENIEMKGDKCASPPLSPLPLKKSPVPAPRRK
ANHKVVNEAEPIHHSISCVEKLKKDESSCPSTCKSGTTETTVITDELLRFTRKRLQAFVR
KFVKRAKFVEDNSTEVTFLLPEVSAHNGDFEDLFMELERSRKKLGISSFGVSDTSLEEVF
LRVAEQDGEKQTDEVKRNKLEENSDRGRVPRPVTNLSFRHNRKASYLRSQSVEEKNETID
LEESSADGFNHELQETVQGKRLLFMQFYALLIKRFHHFKRSKKGFLCEIVMPVLFILISM
VFAKIESPYSEPQPMTLHPWHFTPKRSDPHLFMFYSLDEKSQLGKHLVRTLKSDYGIGNR
CLDSEIYTLQGYPCQPQYAALYISDTTRNQTLDCSCSTGVQQCPKGSEGLEPPLQMLAST
DYLYDLTDRNISQWLLKTNDQFIGRRFGGFSFGEKTKLAKLNNKNVQELLQKFSSVKTAD
KSYGVDNNKIWSNVALLLHTMATEDIAKVWYNNKGYIAVVSYMNVVNNVILRSRLPRNKD
PSKYGITVINHPLQLSQQQSHQESKFNSKADVLVATCVIFAMSFIPASFVMILIDERITN
SKHLQFVSGVNPLIYWSTNFFWDMLNYSISCALCVCIFLGFQVESYISPSNIPCLILLLI
LFGYALIPMMYPFSRMFNVASTAMVTLKSINIFIGTTSTLSTFILELLAEEDEQLQYINE
LLKNVMLIFPQYCLGLGLMEMSRNQLYTDAFKKFNLKSKISPLQFNMVGKNILALFLQGT
LFFVINLLIEYNFCIKPRQITIKDYPHDDTDVDVEKERKRVLDGAAVDDIVRVENMTKIY
KMAEGTSKHTAVDRLCVGIPKGQCFGLLGVNGAGKTTTFKMLTGDIPLSSGMASIAGHSV
IDEIDFVRKCVGYCPQFDAYDLLLTSKEVLVFYARLRGIPEKDVNKVADWGIKKLGLIPY
ANKISGGYSGGNRRKLSTAIALLGNPKVIFLDEPTTGMDPKARRFLWTCINSIVKDGRSI
IMTSHSMEECEALCGRLAIMVNGKFRCIGSIQHLKNRFGDGYTILIRVSGANPNLEPVER
YINTMFPGSTLKEKHHNMVQYQLGPTIKLSYIFGQIESVRHEFSIEDYSVSQTTLDQVFI
NFAKNQTDILPEEESSAIDFQTIDESADSMENHTLQNLRVSQTGSTIDLIGSETDDPIYV
NTAFVSDLEESDV
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggggttttggaaacagcttggtttgcttctgtggaaaaactatactttaaggaaaaga
caaaagttcagattattggctgaaatagtgacccccaccattcttttgttagtgctggtg
ttagtccggactcgtccggatcttcaggaatacaaccatgaatgtcattttgatggaaaa
gcgatgccgagtgcaggtgttctcccctttcttcagtccttcttttgtacctttaataac
acttgtcatgaaacaggaacacaagacgaacaaccgggacatgttggcaactttgacaag
tccatactgactaacctggtctttgacatcgaggaagtgctgaatagtaacatagacaga
gatctgattagtgacctgctggaggactgggaaatcatcactcagctgatgaacaaaatt
agcagcggcagtactacaggagcaatacgaatcggaacaatattgggaaatccccaaaat
ataagtgatgttgtgaagacgaaggagatcaacctgtcaatagatgttttgatcaacgtc
atgaatgccaccctagacttcaatcagcttaacaaaccaagtttaaacaagatatttaag
gattttgacacctgccccgactcgcagcaccgccagcctgccgccctggagatatggcag
cgtatttgtgatacaggaagcgtgcttcacacgatcaactttcacagtgatgaagctaag
aaacagagtcgggaggagctttgtaaccttgaaaagagtgaccttgaacatatgtaccag
gctttcagagctcagttcagcatccagagattttttatacagatgtttaaatttatattt
gtcaacacaatgaaaattccaaatgttcaagatatctacaagagatttaaaaagctgata
agtgatttaacatctttgaaggagttggacgtcaataagatggaaaaattcttcagagac
atgaataaaaagaaaatgaattctactctgatcattcaaaatcttggtgactttgtttgt
ggggccaattcctttttacgcatgcaaagcaaacgttctgaagatctgtttgagagattt
cgatctcatggtcgtctttcaagaggagaatccgactcaaatagtgccacaaatggttac
ggaaaggatcgtcctctttgtcgggacgtggtgaatttcctaaatgaggatgtccagacc
cagattctgtggaagaatctcagacctgtggtgatggggaggatcacgtatgccccagac
ataccatcagtcaggaaagttatagaaaaggcgaatcagacattctctgactttgcgaga
tcagtacagttagctaaagattgggaaggctatattgattctgtccagaagcactttgca
gagagttcaacatatgatattttgagaaggttctctgggtcctgtttgtgtgacctggtg
gagaacatcacaatgacagcctttggtaagacaaagagtgtggggatctgtcgattcacc
aagactctactgagtgggagcccggatatcgggagttataactggagggacattatcaag
tttactaaatcactggccagggtcctagcagattatggagagtgcatggtatttgacaag
tttgttggatttgcgacagaagaagaaatgcttgtagagagtgccaaaatggtggaaaac
aacactctgtggggagccctggtgtttgatgtcagcaatgagacacacatgtactctttg
ccgtcccatgtcgcttacaaaataagaatggatgcagacagagtggacaccacagacaga
gtcctagatcaagtgtacaagcctggtccccggagaacgcccggtaagcagaccaagttt
ctaagttacggctttgcgtacctccaggatatggtggaacatgccatcattaagatacag
acaggctctgacaaagacgtgggggtgatggtggaacagtttccatatccatgctacata
cgagattcgttcacctacgccattgagattgttctccctcttcttctggtattagcctgg
atactaccagtagccatgctgtgtaagaatattgtatatgaaaaggagaagaggttaaag
gaagtgatgagaatgatgggattgggtaatggcgtccattggctggcctggttcattaat
gcgtttgttgtaatgatgttcaccatgggacttcttgttgttttattgaaatatggaaat
gtcatcaagtacacagaccctacgattctgctgttcttcttcaccacatttgccgtggct
accatcatgcagtgttttttcttcagcgttctgtttcatcaggccaatctggcagcctgc
agttcaggcttcctatacttcacgctgtatattccatacgtgttggctaaacgatggcag
gaggttctacatctcccagaaaaaatggcaatctgcttgtcctccagcattgcgtttgga
tttggctgctttaagatttctcagtttgagcagcaggccgtgggcgtgcagtggaacaac
atctgggacagccctatgacaggagacgacttttccatgatgcatatcattatcatgatg
tgcgtggactcagtgatctatggtttgctgacgtggtacatcgaggcagtgttcccaggg
cagtatgggatcccgagaccttggtacttctttgtactgaaatcttactggtgtgggggc
gtatctgagaaggacagtctggaggagggtctctcaccatatttcgacccggagggcaag
ccagtagaagatgaacctcaggaccggacgttaggtgtggctatcagaaacctgaggaag
gtgtacagtgaaggaaacaaggtggccgtcaatggactcagtctcaacttctacgaaggg
cagataacttcgttcctaggtcataatggagctgggaaaacgaccacaatgtctattttg
acagggatgtttccaccaacagatggcactgcgtatatctatggaaaagacataaggaag
gacattgatgagattcgtcagagcctgggagtttgtcctcagcacgatttactgtttcag
tttatgaccgtaaaggaacacctctggttttattcacagttgaaaggattaagtctgcaa
gagactgcaaatgaaatcaatccaatgatccgggacattggattgggtcacaggaagcat
gcctttccggacatgttgtcaggtggaatgaagagaaagctgtctgtggccatcgctttc
gtggggcatgtgaagacggtcattctggatgagccaacagcgggggttgacccatactcc
aggagatcaatatgggagctgcttctgaagtataaagaaggtagaacgattattttatcc
actcaccacatggatgaagcagacgttctgggagacagaatagccattatctcgcaggga
agactttgctgttgtggttccagcctctttctgaaatctcagtacggtaatggctactat
ctgacgatagttagaaatctgaacgaggagaatattgaaatgaagggagataaatgtgca
tcaccaccactgagtcctctccctttgaagaaaagtccagtcccggctcccagaagaaaa
gccaaccataaagtggtgaatgaagctgaaccaattcatcatagcatttcttgtgtggag
aagctaaagaaagatgaaagttcctgtccttctacctgtaaatcaggaaccacggagacc
acggttataacagatgaattgctccggtttacaagaaagcgattacaggccttcgtgagg
aagtttgtcaagcgggcaaagtttgtcgaggacaattctactgaggtcactttcttgtta
ccagaggtcagtgcccacaatggagactttgaggacctgtttatggaattagagagatcc
aggaaaaagctcggaatctccagcttcggtgtgtctgataccagcctggaggaggtgttc
ttgagagttgctgagcaagatggtgaaaaacaaacagatgaagtaaaacgaaataaacta
gaggaaaattcagacagaggaagagttccgaggccagtgacaaacttaagtttccgacat
aacaggaaagcctcctacctgagatcacagtccgtggaggagaagaatgaaactatcgac
ctggaggagagcagtgctgatggatttaatcatgagttacaagaaacagttcaaggaaag
agactcttgttcatgcagttttatgctttacttatcaaaagatttcatcacttcaaaagg
agcaagaaaggcttcctgtgtgagattgtaatgccagtgctgttcatcttgatctccatg
gtgtttgccaaaatagaatctccatactcagagccccaaccaatgactctgcacccctgg
cattttacaccaaagaggagtgatccgcatttatttatgttctacagcctggatgaaaag
tctcagctgggaaaacaccttgtcagaactttaaaatcggattacggtatcgggaatcga
tgtctggattcagaaatctatacattacagggatacccttgtcagccacagtatgcagcc
ttatatatctcagacacaactagaaatcagacactggattgttcatgcagcactggtgta
cagcagtgtccaaaaggatcggagggactggaacctccactacagatgctggcttctaca
gattacctatacgatctcacagacagaaacatatctcagtggctgctgaagacaaatgat
cagttcattggaaggagatttggaggcttttcatttggagagaaaaccaaactggctaaa
ctaaacaacaagaatgtacaggaattactgcagaaattctcatcagttaaaacagctgac
aagtcttacggcgtagataacaacaagatctggagcaatgtggctctgttgttacacacc
atggcaacagaggatatcgccaaggtttggtacaacaacaaaggctacattgctgtggta
tcgtacatgaatgtcgtcaacaacgtgatactgagaagtaggctcccccgaaacaaggac
ccctccaaatacggcatcactgtcatcaaccaccccctacaactatctcaacaacagtcc
catcaggaatccaaatttaacagtaaggctgatgtgctggtggcaacctgtgttattttt
gccatgtccttcattcccgccagttttgtcatgattctaatcgatgaacggatcacaaat
tccaagcatcttcagtttgtcagtggcgtcaatccactcatctactggtcaacaaacttc
ttctgggacatgctaaattactccatttcctgtgcattgtgcgtctgcatcttcctggga
tttcaggtcgagtcgtacatcagtcctagtaacattccatgtctcattctactgctaatt
ttatttggctatgctctgattccaatgatgtatcccttctcccgcatgttcaatgtggct
agcactgccatggtgaccttgaagtcgataaatatcttcataggaaccacttccactctg
tcgacgtttatactggagctcctggcagaagaggatgagcaactccagtacatcaatgag
ctgttgaagaatgtgatgctgatcttccctcagtactgcctgggcctgggtctaatggag
atgtcccggaaccagctctataccgacgccttcaaaaaattcaatctgaagagtaagata
tccccgctacagtttaatatggtgggaaaaaacatcctagcactgtttcttcaagggacg
ctgttctttgtcatcaatcttctgattgaatacaacttctgtattaaaccaagacaaata
acaataaaggactatccacatgatgacacggatgtggatgtggagaaggagaggaagaga
gtgttagacggagcggcggtggatgacattgtcagggtggaaaacatgaccaagatttat
aagatggctgaggggacgtcaaagcacacagcagtcgatcgcctgtgcgtaggaataccc
aaggggcagtgttttgggctgttgggggtcaacggagctggaaaaactacaacatttaaa
atgctgacaggggatatcccattatcaagtggaatggcatctattgcaggacatagtgtg
atagatgagattgactttgttcgtaaatgtgtcggctactgcccacagtttgatgcttat
gacttattacttacgtctaaagaagtgctcgtgttttatgctcggcttcgaggaatccca
gaaaaagatgtcaataaggtggctgactggggaatcaagaaacttgggctgattccgtac
gccaacaaaatatcagggggctactcagggggaaacaggagaaagctgtccacagccatc
gcattgctggggaatcccaaggtcattttcctggatgagcccaccactggtatggatcca
aaagccaggcgatttctgtggacctgtatcaacagtattgtcaaagatgggcgctcaatc
ataatgacttctcacagtatggaggagtgtgaagctttgtgtggcaggctagccatcatg
gtcaatggaaagtttagatgtattggcagtatacagcatctcaaaaacagatttggtgat
ggttataccatactgatccgagtcagtggcgctaatcctaacctggagcctgtggaacgg
tacataaacaccatgttccccggcagcactcttaaggagaaacatcacaacatggtgcag
taccagctgggccctaccatcaaactgtcctatatatttggtcagattgagtcggtccga
catgaattttctatcgaggattactctgtgtcgcagaccacacttgatcaagtatttatt
aattttgccaagaatcagacagatattcttcctgaggaggaaagtagtgcaatcgatttt
cagaccatagatgagagtgctgattccatggagaaccacaccctgcagaacctgagagtg
agtcaaacaggaagtacaatagatctgattggaagtgagaccgatgacccaatttatgtg
aatactgcttttgtgtcagacttggaagaatcggatgtgtga
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integrated database retrieval system
