Ostrea edulis (European flat oyster): 125670926
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Entry
125670926 CDS
T09123
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oed04040
]
125670926
Ion channels [BR:
oed04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125670926
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125670926
NCBI-ProteinID:
XP_048762326
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Position
4:71781801..71803035
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AA seq
1223 aa
AA seq
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MIARDEAPDSPNNSLMNLVTTPQKDNGNKPKFFSRRRLMGKRVFSEIFKNSGEENVINKM
VGGQITKENTGSVQNDVCLMSENPFRICKLARAGNLNDLQTYLDDDPSRINAQDPRGWSA
LHHAAMRGFSDIISYITSHGGDINLQDRDGNTALHVAVEKEQTQCIEALIQQGADTSVLN
CAKMAPVHLAIDLGLIEQLRTILLLDKSSTIMRGETGNTPLHYCAFKDRDDCAKLLLEHG
AKPCLSCDDGFYPIHSAATRASDKTLEVLIKHVERLGYTRESVLSFTDKYNNTPLHSAVS
SGDPEAVRVCLNAGAGLDVQQEDKSTALHFACAQGGLNIIHIMRQLQPEKFIIASQKTDI
LQMTPLHRAALFNHVTVVKFLIDEKVEINAVDCQKRTPLLLAASKGGWKTVQLLLESGAD
ISCKDNKNRNFLHLAIKYGGKLNQFGVQSIKHFKNLLNEKDDYGCTPLHYASKEGYLVAL
DDLIELGATVNPKNKDKQSPLHFAARFGRYNTCRRLLDSKLGPNIINESDCDGLTALHLA
ALNGHVKIINLLMQKGACLTRAHDDNSPIHMAAINGYTKCIRALLSVHANILDVKNKHGV
RQFPLDIWFMFPVSFCCETSHSLVSKVLITFSICLQDTALHIASRAGQAKVIELLLSLGA
KITNNVEEKSFIDIAIENRQTSVAQTAVKHARWSEVLHTCSETYGCPMHGLIQHLPDVCM
TILDRCVTNGGGDPHQKEYYTEYNYEYMQCPVRYVREAKKIGKDIQPMFALNLMVRHGRV
ECLSHKLCRTYLNMKWRAYGMWVHSVNLVLYLAYLSMLTLLATKDFTTSRGGSPANSTQN
TTELPETKIYYMSDGYRLVTALVFLFLIINVIKEIVQMAQQRVRYFLDPNNLLEWVLYMS
TAVFIAPVLFHYSDTLNMEAGAVAIFLAWFNCLLFLQRFDVFGIYVVMFLEILVTLLQAL
SVFSILLVAFGLAFSMLLQHEESHAYSNPLMSIVRTTMMMLELDYMSSFNDPYFDDNSST
LPYSTLTILFLLVFVLLMPILLVNLLIGLAVGDIESVLRNATLKRLAMQVEHHTELERRL
PSRLLEKVDKMTSREYPNKCGKYMKVFKSFVQTETESSSICGGEEASYLKSELLKQKTRL
KEMSVNMERNYDMLKLIVQKMEIETEADNHDEGFQTSQSIDAIHPSTMWNSDVLRKNLVR
QNAVISKWKVNTQHTNLQNSFDC
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgcgggatgaagcgcctgactctccaaacaatagtctaatgaatctagtgaca
acaccacaaaaagacaacggaaataagcctaagttcttcagcaggaggagactaatggga
aaacgcgtgttttctgagatttttaaaaattcaggggaggaaaatgttataaacaaaatg
gtcggaggacagattaccaaagagaatacgggtagcgtgcagaatgacgtgtgtctaatg
agtgaaaatccattcagaatctgtaagttagcccgagccgggaatcttaatgatctgcag
acatatttagatgatgatccgtcacgcatcaatgcacaggacccacgtggatggtcagcg
ctgcaccacgccgccatgcggggattctctgacatcatcagctacattacgtcacatggt
ggagatatcaatctccaggacagggacgggaacacagcgttacatgttgccgtggaaaag
gagcagacgcagtgcatagaggccctgatccagcaaggggcggacacgtccgtactgaac
tgcgccaaaatggcgccagtccacttggcaatagacttgggacttatagaacagctacgt
actattctgctcctagacaaaagcagcaccataatgcgaggagaaaccggaaacacacca
ctccattactgcgccttcaaggatcgggacgactgcgccaaacttctgcttgagcacgga
gccaagccatgtcttagttgtgatgacgggttctacccaatccactccgcggcaacaagg
gcttccgacaaaacgctcgaggttctcatcaaacacgttgaacgacttggttacacccgt
gaaagtgtgctgtcattcacagataaatacaacaacacgccactacactctgccgtcagt
agtggagacccagaggctgtgagagtgtgtctcaacgcgggggctggactggacgtacaa
caggaagacaagtccactgctcttcattttgcctgcgcccagggaggactgaatatcatc
cacatcatgcgtcagctacagcctgagaaattcataatagctagtcagaagacggatatt
ctacaaatgacgcctcttcatagggcggcattgtttaatcacgtgaccgtcgtcaagttc
ctaattgatgagaaagttgaaattaatgctgtggattgccagaagaggacgccactgttg
ctagcggcgtcaaaaggaggctggaagactgtacagcttttgctagaaagtggtgcagac
atctcctgcaaagacaacaaaaacaggaacttcctccacctcgctattaaatatggtggc
aaactcaaccagtttggtgtacagagcatcaagcatttcaaaaatttgttaaatgagaag
gatgattatgggtgtacgccattacattatgcctctaaggagggttatcttgtggccctg
gatgatttgatcgaactcggcgcaacggtcaaccctaaaaataaggacaagcagtcgcct
ctccacttcgcagcaaggtttggccgttacaacacttgcagacgattactggacagtaag
cttggacccaacatcattaacgaatcggactgtgacggattgacagctctccatctagcg
gcgctcaacggacatgtcaaaatcattaacctcctcatgcagaaaggcgcatgtctcaca
agagcacacgatgacaactctcccattcacatggcggccattaacggatacacgaagtgc
atccgggcacttttaagtgttcatgccaacatactggatgtcaagaacaaacatggggta
cgacagtttccgctcgatatatggtttatgtttccagtatctttctgttgtgaaaccagc
cactccttggtaagtaaagttttgatcacattttccatttgtctgcaggatacagctcta
catattgcatcacgtgctgggcaggcgaaagtgatcgaactcctgctgtcacttggcgcc
aaaattacgaacaatgtagaggagaaaagttttattgatattgccatagagaatcgacaa
acttcagtagcacagacagcagttaagcacgctagatggagtgaagtgcttcatacatgt
tccgaaacatatggctgccccatgcacggcctgatccagcatttacctgatgtctgtatg
acaatcctcgatcgctgtgtcaccaatggaggtggagatccacaccaaaaagaatattac
actgagtacaactacgagtacatgcagtgcccggttcgttacgtcagagaggcgaagaag
atcggaaaagacatacaaccaatgtttgcccttaatttgatggtccgtcacggaagagta
gagtgtctgtctcacaaactatgtcggacttacctcaacatgaaatggcgtgcgtacggc
atgtgggtccattccgtcaacttagttttgtatttagcgtacctttcaatgctgacactg
ctggcgacaaaagatttcacaacatcacgcggcggatctcctgctaactctacccagaat
acaacagaacttccggaaaccaaaatttactatatgagtgatggttacagactcgtcaca
gccctcgtgtttctgtttttaatcatcaatgtcataaaagaaatagtccagatggcgcaa
cagcgcgtacgatattttctggatccaaacaatcttctggagtgggttctctacatgtcc
accgcggtctttatcgcccccgtccttttccattactcggatacccttaacatggaggct
ggtgctgtggcaatattccttgcctggttcaactgcctgctctttcttcagcggtttgat
gtgtttggtatttacgttgtgatgtttctggagattctggtcacattattacaagcactc
agtgttttctccatccttctggtcgcctttggattggccttctccatgctgctacaacac
gaggaaagtcatgcttactctaatccactgatgtccatcgtccggaccaccatgatgatg
ctggagctggactatatgtcctcctttaatgatccgtactttgacgataattcctccaca
ctgccctactccacactcacaatcttgttcctcctcgtctttgttcttctgatgcccatc
cttctcgtcaatctgctgattggtctagctgttggtgacattgaatctgtgttaagaaac
gcgactctaaaaagactggctatgcaggtggagcatcacacagagctggaacgccgccta
ccgtcaagacttctggagaaagtggacaaaatgacatctagagaatatcccaataaatgt
ggaaaatatatgaaagttttcaaaagcttcgtgcagacggaaacggagagttcatcaata
tgtggtggtgaagaggccagctacctcaagtctgaactcctcaaacaaaaaacaagattg
aaggagatgtctgtgaacatggagcgtaattatgacatgctgaaactaattgttcagaaa
atggaaatcgagacagaagccgacaaccatgatgaaggttttcaaacttcacagagcatt
gacgccatccacccctccacaatgtggaattccgatgtactcagaaagaatcttgtacgt
caaaatgccgtcatctcaaagtggaaagtgaatacacaacacacaaaccttcaaaatagt
tttgattgctga
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