Ostrea edulis (European flat oyster): 125670938
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Entry
125670938 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125670938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125670938
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125670938
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
125670938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
DUF6243
Motif
Other DBs
NCBI-GeneID:
125670938
NCBI-ProteinID:
XP_048762370
LinkDB
All DBs
Position
1:99242435..99271856
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AA seq
925 aa
AA seq
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MEESEVHTDICRVCRCESTPDKPLYHPCVCTGSIRYIHQDCLVQWLKYSRKEYCELCKHR
FAFTPIYSPDMPKRLPVKDIFGGLLSSIGRAVRYWFHYTLVAFAWLGVVPLTACRIYRCL
FTGSVSSLLTLPLDMLSTENLASDCFHGCFVVTCTLCAFISLVWLREQILHGGGPDWLEQ
DNQRRNNIRNPLDGAVVNNLVGLGGGRGRAPAGNQNEANNVGDVGQAAANEEEQEEDGVE
GVDGANNGNNGAQDDNNWNPIEWDRAAEELTWERLLGLDGSLVFLEHVFWVVSLNTLFIL
VFAFCPYHIGHFTMVGMKMDDMVESTHFEGLLTTMIGYIVISASLIVLYMMCSIAKLRNL
SAEHRLMELVHSPLHRFRRVLGLCYVVVKVMLLVVIEVGVFPVICGWWLDVCSLSMFDAT
LKDRKTSFHAAPGTSMFIHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPEFNPI
QEMIHLPVYRHARRFLASVVIFGSTVLLMLWLPARVIRKVFSSFLPYHVMLSSDAPVSEL
SLELLLLQVVLPALLEQGHTRMWLKGMIRGWTVGVAYLLGLRSYLLGDAPLQDGDHVVEG
DPAVQPQPAAANNPAPPPAGGGLRAAHVAMLQGGGPTGFQSYKRPQIFPFRIVLLVLCLC
FTLFSMSLVSLVLPVFVGRKLMSLWMGEAKVHELYTAACGLYVCWVVLRIGTVLYNWIPQ
GTSVILNKVKEWVFLASKCILVALLLIGVVPLLLGLLFELVVVAPLRVPLDQSPIFFPWQ
DWALGVLHAKIVTAVTMMGPQWWLKRVIEQVYNDGIRNINLRFILTKLCAPVIGVLGMSL
SLPYVVARSIVPFLGFPFEVENLVLRRIYPFLLACIICVLILIFQIRQFKRLYEHIKNDK
YLVGQRLVNYEPHKAANVVPQMPSS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcagaagttcacacagacatttgtcgtgtctgtcgctgtgagagcacgcca
gacaaacctttgtatcatccatgtgtgtgtacaggaagtatccgatatatacatcaagac
tgcttggtgcagtggcttaaatatagtaggaaagaatattgtgaattatgtaaacacaga
tttgcattcactccaatttattcccctgatatgccaaagagactgcctgttaaggacata
tttggaggattattgtccagtatagggcgagccgtgaggtactggtttcattacacactt
gtggcattcgcctggcttggagttgttcctctcactgcctgtcgtatttatcgatgtctg
ttcacgggctccgtcagttcattacttaccttaccgttagacatgttatcaacggagaat
ttagcatcggattgcttccatggctgttttgtggtgacatgtaccctgtgtgcattcatc
agcttggtttggcttagagaacagattttacacggcggtggaccagattggctggaacaa
gacaatcaacgaagaaataacattaggaatccactagatggggctgttgtaaataacctt
gttgggttaggagggggcagaggaagagcacctgccggcaatcagaatgaggctaacaat
gtgggagatgtgggacaggcggcagccaatgaggaggaacaagaggaagacggtgtggag
ggagtggatggcgcaaacaacggaaataatggggcccaagatgataataactggaatccc
attgagtgggatcgggctgctgaggagttgacctgggagaggctgctgggattggatgga
tccctcgtcttcctggaacacgttttctgggtggtgtctctgaatactttatttatattg
gtgtttgcattctgtccctaccacattggacactttacgatggtcggtatgaagatggat
gacatggtggagtcaacccattttgaaggtctcctgacaactatgataggttacatagtc
atctcggcatcactaattgtcctgtacatgatgtgttctatagccaaacttagaaatttg
tcagcagaacacagattgatggaacttgtccattctccattacacagattccgcagggta
cttggtctctgttacgtggttgtcaaggtgatgttgctagttgtcatagaagttggtgtg
tttcccgtcatttgcggctggtggcttgatgtctgctccttgtctatgttcgatgctacg
ctgaaggacaggaagaccagtttccatgcagctccagggacctccatgtttatccactgg
ttggtggggatggtgtatgtgttctactttgcctccttcatcctcctcctcagggaggtc
ctcagaccaggcgtcctctggttcctcagaaaccttaatgacccagaattcaacccaata
caggagatgatacacctacctgtgtacagacacgcccggaggtttttagcatcagtcgtg
atctttggaagcactgtattactgatgctgtggctgccagcccgagtcatcaggaaagtc
ttctcatcatttctaccttaccatgtcatgctgtccagcgatgccccggtcagtgaactc
tccctagaactcctgctgttacaagttgtactgccagcattgttagaacagggacacaca
aggatgtggctaaagggaatgattcgtggctggacagtgggcgtggcatacctcctgggt
cttcggtcgtacctgctgggagacgcgccactacaggatggggaccatgttgttgagggg
gatccagctgtacaaccccaaccagctgcagccaataaccctgccccaccccctgctggt
ggggggctgagagcagcccatgttgctatgttacaaggagggggaccaaccgggttccag
tcctacaagaggccacaaatcttcccattcagaattgtgctgcttgtcctttgtctgtgt
ttcactctcttctctatgagtctagtctctttagttttacccgtatttgtggggcggaag
ctgatgtccctgtggatgggagaagccaaggtccatgaactttacactgcggcttgtggt
ctgtatgtctgctgggtcgtcctccggatcggaactgttttgtacaactggatcccacag
ggtacctcagtcatcctcaacaaggtcaaggagtgggtgttcctggcttccaaatgcatt
ctggtggctctcctgttgattggagtggtgccattattacttggtttgttgttcgagttg
gtggtggtagcaccacttcgtgtaccactagaccaatcacccatatttttcccatggcag
gactgggcacttggtgtactacatgccaaaatcgtgactgctgttaccatgatggggccc
caatggtggcttaaaagggtcatagagcaggtgtacaatgatggcattcggaacataaat
cttcgttttatcctgacaaagttatgtgctcctgtcattggagtgcttggaatgtctctc
tcactgccgtacgtagtggcgaggagcatagtcccattcctaggtttcccgttcgaggtg
gagaacttggttttaagaagaatctacccattccttcttgcctgcattatttgtgtatta
attctaatattccaaattcgccagtttaaaagactttatgagcacatcaaaaatgacaag
tatttagttggtcagagactagtcaattatgaaccacacaaagctgccaacgttgtcccc
cagatgccatcttcttaa
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