Ostrea edulis (European flat oyster): 125671253
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Entry
125671253 CDS
T09123
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125671253
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
125671253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
RIF2_lid
Motif
Other DBs
NCBI-GeneID:
125671253
NCBI-ProteinID:
XP_048762770
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Position
4:71968482..71996230
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AA seq
1350 aa
AA seq
DB search
MSQKSIEDTITDVVRDILRGEAVEEALCSVILHSEESAQWKKDHCFNSLKTALASVPQES
LDIALKCYIAQIYSVKNASRVDLLLDLLEALVENSIVPAKPICDALLSHELLQYKASLMW
TKTFQLMRKIIGGVDYKGCRDLLRGILEKCQGIKEDENVSVMPDIDTAVNLVAHILDRNV
CLLPAYLAVNEINKVCPEDKKWPHWKMGSILADFVHSFRPAAQMVTVSGRSHLLPVVGHS
NAISTSNVWRLSSNCLKFPLNGPLPYDKELSEPQTGLLRYVLEQPYSRDMVCNMLGLNKQ
VKQRCEVLEEQLVDLVVMAMERSEKDDATNDECLSQLLWQHLSSQVIYFVLFQFASFPHM
VMSLYEKLKGRNLNKGRDHLMWVLLQFISGSIQKNPLKEFLPVMKLYDLLYPDKGTITMP
DVMKAQSTHGVAATCIWIHLNKKAQTDTIKLPRPIPHALQEHCEFLKQSLSNKNLSLTDY
KIALLCNAYSTNNDYFNLPMGKLVESIYGDNKHTTLLPGNIVASAPTQPLAMSLLDSLTV
HAKMSLIHSIVHRVIKQAKSKATIAQSPALIETYSRLLVYMEIESLGIKGFISQLLPTVF
THNAWGILHTLLEMFSYRLHHTQPHYRIQLLSHLHHLSQSAQTNQNQLQLCMESTALRLI
TGLGSFEVQPQLSRIFNEPGRPGFLSNESEELNRALILTVARAMHVTGVDSFSSTWLREI
LNQIMTNTPHNWSPNTLANFPTSLAEFFHAQPQHRDDKNTLKRNVDAEYKKWKTMANEND
IIAHFSMQGSSTVFLCIIWKTLLEENRVPSIAYKVLDRLGPRAVSAHLRTFADYIVSELN
LNSAGGQHFHKAIDSLNEMVWRYNIVTIDRLILCLALRNVDEDARLCYLLIHMLLLKPQD
FKSRVQEFVKENSPEHWLQSNWHDKHMAFHRKYPEKFYFEGIQDLSSPIQHQYLPVYFGN
VCLRFLPVLDILLHRILEQPSLTTSNLNLFEKILESLGVLYKFHDHPITYLYNTLHYYHK
ILVQRAAYKRRLVTTIWNAHQEIRPNTWFLTEDYQRFSHEESLEWTPDLDYYVRIIGRLV
DTIGGKSPFPNCDWRFNEFPGPAAHALYVTCVELMSLPVPGNVVGNALLDVVMKSSTLLQ
RDKVTSWMNAVGLVLTALPETYWISLNNKIGETICSSPLTIQGGCQPFQVFNFTTSQTVF
AEQHMTYLLALSHAVWHHSGIGQLSQLNIFLRDHLKPVVKTEEQFLYVCHLVGPFLQRLH
SERTRSLMELVVELYEILVNVDKSCDHLRYLDPITDFLYHIKYMFVGDSVKHEIEKISRN
FRQMLSLRLRFISHINLEEAMTPLAPPMST
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaaatcaatcgaggacactatcacagatgtcgtgagagatattttgcgagga
gaggctgtagaagaagcgctttgttcagtaattttacattcagaggaatctgcacaatgg
aaaaaagatcattgcttcaacagcctcaaaactgctctggccagtgtaccccaggagagc
ctggacatcgcgctaaagtgttatattgcacagatttacagcgtgaagaacgccagccga
gtagacctcctgctggatctgttagaggctttggtggagaacagcatagtccctgctaag
ccaatatgtgatgccttattgagccatgaactcctccagtacaaggctagtctgatgtgg
accaagacgtttcagctgatgaggaaaataatagggggcgtggactacaagggatgtaga
gatttgcttcgtggcattttggaaaaatgtcaaggtattaaggaggatgagaatgtgtcg
gtcatgccagacattgacacagcagttaatttagtggcccacatcctggatcggaatgtc
tgtctgttaccagcatacctagcagtgaatgaaatcaataaagtctgccctgaggacaaa
aagtggccacactggaagatggggtccatcttggctgactttgtgcacagctttcgtccc
gccgctcagatggtcacagtttctgggcgttcccatcttctgccagtggtgggccattcg
aatgccatctccaccagcaacgtgtggcgactcagctccaactgtctcaagtttcccctc
aatgggccccttccttatgacaaggaactgtcggagccccagacagggttgttacgatac
gttctagaacagccgtactcacgggacatggtctgtaacatgcttggcctcaataaacag
gtgaagcagagatgtgaagtcttggaggagcagctggttgatctggttgtcatggcaatg
gaaaggtcggagaaagatgatgctaccaatgatgaatgtttgagtcagttgctatggcaa
catttatccagccaggtcatctattttgtgctgttccagtttgccagttttcctcatatg
gttatgtctctgtatgagaagctgaagggacggaatctgaacaaaggtcgggatcacttg
atgtgggtgttactacagttcatatcaggcagcattcagaaaaatccattaaaagagttt
ctgcctgtgatgaagctgtatgatctgttgtacccggacaaggggaccatcacaatgccg
gacgtgatgaaggctcagtccacacatggagtggcagccacatgcatctggatccatctc
aacaagaaagcccagacagacactatcaaactgccccgccccattcctcacgctctacag
gaacactgcgagtttttgaaacagagtttgagcaataagaacctgtcactgacggattat
aagattgccctcctgtgtaatgcttacagcacaaacaatgattactttaacttacccatg
ggtaaactggtggagagtatctatggtgacaataaacacacgaccctgttgcctggcaac
attgtggcctctgccccgacccagcccctggctatgagtctattggattccctgacagtt
catgccaaaatgagcttgattcacagtatagtccatcgtgtgattaagcaggccaagtcg
aaggcgacgatagcacaatcacctgctctgatagagacttacagcagactactggtgtac
atggagatagaatctctggggatcaaaggattcataagtcagttactgcccactgtgttt
actcataatgcctgggggattctgcacactctcctggaaatgttcagctaccgtcttcat
cacacacaaccacattaccggatacagcttctgagccatttacatcacctcagtcagtca
gctcaaaccaaccagaaccaactacagctgtgcatggagagcacagccctgaggttgatt
actggactaggaagctttgaggtacagccacagctatccaggatatttaatgagccagga
cgtccagggttcttgtctaacgagtccgaagaactcaacagggcacttattctcacggtg
gccagagccatgcatgttacaggtgtagacagtttttcatccacctggctgagggagatt
ctgaatcaaatcatgactaacaccccccacaactggtccccaaacaccctggccaatttc
cccacaagtctggccgagttcttccacgcccagcctcagcatcgagacgacaaaaacaca
ctgaaacgaaatgtggacgcagagtacaaaaagtggaaaaccatggccaatgagaatgac
atcattgctcatttctctatgcagggatcttctactgtttttctgtgcattatatggaag
accttgttggaggaaaatcgagtgccatcaattgcgtataaggttttggatcgcctgggc
ccccgagcagtttcagctcacctcagaacatttgcagattatatcgtttcggaactcaat
ctgaattctgctggaggacaacattttcacaaagccattgattccctgaatgagatggtt
tggcgatacaacattgtcaccatagatcgcctgattctatgcctggctttgaggaatgtc
gatgaagacgctcgtctgtgttatctcctgattcacatgttgctgctgaaaccgcaggac
ttcaaatccagagttcaggagtttgtgaaggagaattctcctgaacattggctccaaagc
aactggcatgacaagcacatggctttccacagaaaatacccagaaaagttttactttgag
ggaatccaggatttaagcagtcccattcaacaccaatatcttcccgtttattttggaaat
gtttgcctgcgatttttaccagtactggacatactgctccacagaatcctagaacagcct
tcactaacaaccagtaacctcaacctgtttgagaaaattctggagagtttaggtgtcctc
tacaaatttcatgatcaccccattacctacctgtacaacacactacactactatcacaag
atcttggtccagagagctgcatacaaacgaagactggtcaccaccatatggaatgcccac
caggagattagacccaacacttggtttctaacagaagactaccagagattctcacacgag
gagagtctggagtggacgccagatctggattactatgtccggatcataggcaggctagtg
gacactattggtggaaagagccccttcccgaactgtgactggagatttaatgagtttccg
ggaccagcagcacatgctctatatgtgacctgtgtggagctgatgtcacttcctgttcca
ggcaatgtggtggggaatgccttactggatgtagtgatgaagagttccactctgttacag
agagacaaagtcacatcatggatgaatgctgtaggactagtacttacagctcttcctgag
acctactggatttccctgaacaataagataggggagacaatctgtagctcccctctgacc
atacaggggggatgtcagccattccaagtgttcaacttcaccaccagtcagacagtgttc
gcagagcaacacatgacctacttactggctctgtcacatgctgtgtggcatcactcggga
atcgggcagctatctcagctcaatatatttctgagggatcacctgaagcctgtggtgaag
accgaggagcagttcctgtatgtctgtcacctggtgggtccatttttacagcgactccac
tcggagagaacgaggagtcttatggagttggttgtggagctgtatgaaattctggtcaat
gtggataagtcatgtgatcacctgcgataccttgacccaattacagattttttataccac
attaagtacatgtttgttggggacagtgttaagcatgaaattgagaagatcagccgaaat
ttccgacagatgctgtctttgagactgaggttcatctcccacatcaatctggaggaggcc
atgacaccactggctccacccatgtcgacctga
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