Ostrea edulis (European flat oyster): 125671288
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Entry
125671288 CDS
T09123
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oed03032
]
125671288
03029 Mitochondrial biogenesis [BR:
oed03029
]
125671288
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125671288
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125671288
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125671288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
UvrD_C_2
AAA_16
AAA_7
PhoH
Mg_chelatase
Herpes_Helicase
ABC_tran
AAA_24
RsgA_GTPase
SH3_13
AAA
Motif
Other DBs
NCBI-GeneID:
125671288
NCBI-ProteinID:
XP_048762820
LinkDB
All DBs
Position
4:complement(82369143..82390123)
Genome browser
AA seq
623 aa
AA seq
DB search
MDRLQCTLAVEELTKAGDVQKSSVHKNVFLSVGRNEFRDVVVKVELQKKEMKFALRELQI
HKKFAKDGKSTIKIPDRNLNILISNCPPDRLIYFLKLVSTKFECGKMKGFISERKKLLSD
VPKSFEEISPLTIKDLKSVYEARAKEFESKPELFTPKGKGVKKRKRPHQDDDKENCNIQK
SKLTCNGLNPSSIALPVKAKLSKEQNTILDAVVRGKNVFFTGSAGTGKSFLMRKIIGSLP
PQHTFATASTGVAACHIGGTTLHAFAGIGSGSAPLEQCVQLASRPQIAQQWRKCHHLVID
EISMVDGAFFDKLETVARVVRKNDNPFGGIQLIICGDFLQLPPVTKGTDKKMFCFQAKSW
SRCIQVNLELKEVRRQNDLSFINILQNIRLGKCSEEMYQILKKTANHEIHKNGILATRLC
THKEDVNKINQYHLSKLEGEEKTFLAVDGEEGYQSQLEVLSPVPKSVVLKVGAQVMLAKN
LEVQRGLVNGARGVVVGYDKKNQDYPVVRFACGEQEVIRPVRWTFKLSGTVYVSRRQLPL
KLAWAISIHKSQGMTLDCVEMSLAKVFEAGQTYVALSRAKSLDGLRILDFDRSCVHANPD
VLRFYHKLELTRKMMQVSLNDCW
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggatagacttcaatgtacgttggcagtagaagagctgacaaaagctggagatgtccaa
aaatccagcgtccacaaaaacgttttcctttcggtcggacgcaatgaattcagagatgtt
gtagtgaaggtggaacttcagaaaaaagaaatgaaatttgctttgcgagagttgcaaatt
cacaaaaaatttgcaaaggatggaaagtccacgattaaaattcctgacagaaacttaaat
atattgattagcaactgcccgcctgataggttgatatatttcttaaagctggtaagtacc
aagttcgaatgtggaaaaatgaaaggctttatatcagagaggaagaagctattatctgat
gttccaaaatcgtttgaagaaatcagcccattaacaatcaaagacttgaaatctgtgtat
gaggcaagagctaaagaatttgagtccaagccagagttgtttacaccaaagggaaaaggt
gtcaaaaaaagaaaaagaccccaccaggatgatgataaagagaactgtaacatccagaaa
agtaagctgacttgtaacggtttgaacccatctagcattgctctacctgttaaggctaag
ctcagcaaggagcagaacacgattctggatgctgtcgtcagagggaagaatgtgtttttc
acagggagtgcaggaactgggaaatcattcttgatgaggaaaataattggttcccttcca
ccccagcacacttttgccacggctagtacaggtgtagctgcctgtcacataggaggaact
acattacatgccttcgcaggtataggttcaggatctgcccctctagagcaatgtgttcaa
ctggcttcacgtccgcagattgcacagcagtggagaaagtgtcaccatcttgtcattgat
gaaatctcaatggtggatggtgcattctttgacaaactagagacagtagctagagtagtg
aggaaaaatgacaatccttttggggggatccagctcatcatctgtggagattttttacag
ctccctccagttaccaaaggaacagacaagaaaatgttctgctttcaggcaaagtcctgg
tcacggtgcattcaagtcaacttggaactaaaggaagtgcgacgtcagaatgatttgtct
ttcatcaacatcctacaaaacatccgtctcggaaagtgcagcgaagaaatgtaccagata
ctgaaaaaaactgcaaaccacgagatacacaaaaatggtatcctagcaacccgactgtgt
actcacaaagaggacgtcaacaaaatcaaccagtatcacctgagtaaattagagggcgag
gaaaagacatttttggcagtggatggggaagaaggctatcaaagccagctcgaagttctc
tcccctgttcccaaaagcgttgtccttaaagttggtgctcaggtgatgttagccaaaaat
ctggaggttcagcggggactcgtaaatggagcgcgaggggtagtggtgggatatgacaag
aagaaccaagactacccagtggtgagatttgcatgcggtgaacaggaagtgatccgtcca
gtgcgatggacttttaagttgtctggaactgtttacgtcagcaggaggcaattacccctt
aaactggcctgggcgatatcgatacacaagtctcagggaatgaccttggattgtgtagag
atgtccctagccaaggtctttgaggctgggcagacgtatgttgctctgtcccgagccaag
agtctggatggactcagaatcctggacttcgatagatcttgtgttcatgctaatccagac
gttctccgtttttatcacaagctggagctgaccaggaagatgatgcaagtttcattaaat
gattgctggtga
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