Ostrea edulis (European flat oyster): 125671693
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Entry
125671693 CDS
T09123
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125671693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125671693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125671693
Membrane trafficking [BR:
oed04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125671693
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125671693
Exosomal proteins of other body fluids (saliva and urine)
125671693
Exosomal proteins of colorectal cancer cells
125671693
Exosomal proteins of bladder cancer cells
125671693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Cir_Bir_Yir
DUF6611
Motif
Other DBs
NCBI-GeneID:
125671693
NCBI-ProteinID:
XP_048763511
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All DBs
Position
4:6698120..6707820
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AA seq
220 aa
AA seq
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MFAQIPQGQTDSNNPVLYEEVKLSKSAREREKYDNMAELYAVINTLQSLEKAYIKDAVQP
KEYTAACSKLLVQYKAAFKLVKGDFATVEQFMKKYRLDCSAALERIKEDRPITIKDGISQ
GNTSKAIADIVSLFITVMDTLRLEIRAMDKIQPDLKELMETMSRLSILPKDFEGTQKVKK
WLDIFDEMSASEELDDNQVRQILFDLDSAYNAFNRILHDH
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacagattccacagggacaaacagactccaataatccagttctatatgaggaa
gtgaaactttccaagtctgccagagaaagagaaaaatatgataacatggcagaactgtat
gcagtgataaacactctacagagtttggagaaagcttacataaaggatgctgttcagcct
aaagagtacacagctgcctgctcaaaactcctcgtacaatacaaagcagcattcaaactt
gtaaagggggacttcgcaactgtagagcagttcatgaagaaatacaggttggactgttct
gctgctctggagaggattaaggaggatcgaccaatcacaatcaaagatggtatcagtcaa
ggaaacacaagcaaagctattgcagacattgtgtcgctatttatcacagtaatggacact
ctacgattagaaattagggccatggacaagattcaaccagatcttaaagaactaatggaa
acaatgagcagattaagcattttacccaaagacttcgagggcactcagaaagtgaagaaa
tggttagatatatttgatgagatgtcagcctcagaggaactagatgataaccaagttcga
cagattctgtttgatttggacagtgcttacaatgcctttaatcgcatacttcacgaccac
taa
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