Ostrea edulis (European flat oyster): 125671828
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Entry
125671828 CDS
T09123
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125671828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125671828
Membrane trafficking [BR:
oed04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125671828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
125671828
NCBI-ProteinID:
XP_048763722
LinkDB
All DBs
Position
4:complement(26352205..26367732)
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AA seq
1210 aa
AA seq
DB search
MNPNYPGSTQGQMPPTGYGAPNMNPGQMRPPGPGHMSNPGGYGAQPKPGPGQYGMPPTAN
GPQYPNMGQPGSVPGKPPDMNNFQRPPISMQNNMAPGIPPQPRPPTMMSPPSSASQISNG
MSAMNISQPRGPAPNQTYGAPPSSSGQPPMFPPGGPNMQGSSGLPPTNQMGGMPRPPTSQ
MGGSAPGQFGGMTAPPSSQYSGGPPSQYGGAPPTSQFGGAPPTSKFGGAPPTSQFGGAPP
TSQFGGAPSTSQFGGAPPTNQFGGAPPVSQMGGIPTSQHGGAAGRPPTMPGMPPPSSSSF
GMPPHSMPGPPSGPPTGANQGPPSGMSITDRYGQGPPSGPPSGPNMPPTGSGSFPPAPGP
GGFPPSSQYGGSGPGQFPPQPGQGPPGQMPPQPGQQRYPGGTMPGQTFPPNYPGAQPMAG
PGGMQQPSGPKKLDPDQMPSPIQVIEDDKANRSGNFQTGKGAVPPLVTTKFVVQDQGNCN
PRFMRSTMYNIPCTSDMLKNCHVPFALSISPFAKLPGEEYNPPIVNLGDVGPVRCKRCKA
YMNPNMMFIDGGRRFQCVFCGASTDVPAEYFAHLDHTGRRIDSYDRPELCLGSYEFVATK
DYCKNGLLPNAPAFIFMIDVSYNSIKSGLVHLICERLKEDVLVNLPKEVGQDESEIRVGF
VTYAKEIHFYNVKSNLAQPQMLVVSDLDDVFVPLLDGFLVKLSESEAVIDSLLSQIPQMF
AESRETETVLGPVIQAGLDALKSADRSGKLYIFHTSLPIAEAPGKLKNRDDRKLLGTEKE
KTILTPQNTFYTKLGQECVTAGCSVDVFLFPNAYIDIATISEVCRLTGGNLYKYSYFQMD
EDRADLDGDRFLEDLKYNVMNQTAFDAILRVRASTGIRAVDFLGNFYMSNTTDVEMAAID
REQAINVEIKHDDKLNEADGAFVQVAVLFTSVGGQRRLRIHNLALNCCTQMADLFRNTEL
DTLVNYMAKHAVRTGLNSNPKQVREGIMNQVAQILACYRKNCASPSSVGQLILPESMKLL
PLYANCIVKSDALQGGSEISTDDRSYLMHKLNAMDVASSQVFFYPSLIPMHDLDSHGDRV
PTAVRCSMERLRDNGVYLLENGISMFLWIGHNVEPHWVQQVFSVQSAAQIDIDKCKLLEL
DNPVSQKLKDMINSIRSERCRYMKLTIVRQRDKLEPWFNHFLVEDKGHSGSASYVDFLCH
IHKEIRNLLS
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactatcctggaagtactcaaggacagatgccacccaccgggtacggagca
cctaacatgaacccaggacagatgcgaccccctggcccaggacacatgagcaatcctgga
ggttatggtgcacaacctaaaccagggccagggcaatatggaatgccccctacagcaaat
ggaccacaatatccaaacatgggacagcctggaagtgtgcctggtaaaccaccagatatg
aataattttcaaagacctccaataagtatgcaaaacaacatggccccgggcataccccct
caaccaaggcctcctactatgatgtcacctccatcatcagcaagtcagatttcaaatggt
atgagtgccatgaatatatcacaaccaagaggccctgctccaaatcaaacctatggtgct
cccccctcatcatctggacaaccacctatgtttccaccgggtggaccaaatatgcaaggt
agttctggcttacctccaacaaatcagatgggtggcatgccacggccacccacaagccag
atgggaggttctgctccaggtcagtttggaggcatgacagctccacccagcagtcagtat
agtggaggccctccaagtcagtatggaggtgctccacctacaagtcaatttggaggtgct
ccaccaacaagtaaatttggaggtgctccaccaacaagtcaatttggaggtgctccacca
acaagtcaatttggaggtgctccatcaacaagccaatttggaggtgcaccacccacaaat
cagtttggaggggctccacctgtaagtcagatgggaggaattccaacaagtcaacatgga
ggagcggcaggacgaccacccacaatgccagggatgcctccaccatcatcatccagtttt
ggtatgccccctcattctatgccagggcccccatctggccctcccacaggagcaaatcaa
ggtcctccatctggaatgtcaattacagacagatatggacaaggtccaccaagtggacct
ccatccggacccaacatgcctcctactgggtctggttcatttcctcctgcaccaggacca
gggggttttcctccatccagtcagtatggtggatctgggccagggcagtttcctcctcaa
ccaggtcagggacccccaggacaaatgcctccacagccaggacagcaacggtatccagga
ggaacaatgccggggcaaaccttcccgcccaactacccaggagctcaaccaatggcagga
cctggtggaatgcagcagccatctggacctaagaaactggatcctgaccaaatgccaagc
ccaattcaagtgatagaggatgacaaagccaacaggagtggaaattttcaaacaggcaaa
ggagcagtaccaccgttagttactaccaagtttgtggtacaggaccaaggaaactgtaat
cctcggtttatgagaagcacgatgtacaatattccctgtacctcagacatgctaaagaat
tgtcatgtgccatttgctctaagcataagtccatttgccaagcttccaggagaagagtat
aaccctcccatagttaacctaggagacgtaggaccagtcagatgtaagaggtgtaaagcc
tacatgaatcctaacatgatgtttattgatggaggcaggaggtttcagtgtgtattttgt
ggagcatctactgatgtaccagcagagtattttgcacatctggaccacacaggaaggaga
attgacagctatgataggcctgaactctgcctgggctcttatgaatttgtagctacaaaa
gattactgtaagaatgggttgttgccaaatgcaccagcatttatatttatgattgatgtg
tcctataacagtataaaaagtggattagtccatttaatatgtgaaagattaaaagaagat
gtcttagttaatctgccaaaagaagttgggcaggacgaatcagaaataagagttggattt
gttacatatgcgaaagaaattcacttttataatgtaaagagtaacttggcccagcctcag
atgttggttgtgtctgatttagacgatgtgtttgtgccactgttggacggattcctggtc
aaactctcagaatccgaggccgttattgacagtctgttatctcagatcccacagatgttt
gccgagtcacgggagacagagactgtgttaggaccggtcattcaggctggtttggatgct
ttaaagtctgcagaccggagtggaaaactgtacatttttcacacatccctgccaattgca
gaggctccagggaaactaaagaacagagatgataggaaactattaggaactgagaaagaa
aaaactattctgactccccagaacaccttttacaccaaactcggtcaggagtgtgttact
gcaggttgtagtgtagacgtgtttttgttccctaatgcctatattgatatcgccaccata
tcggaagtttgtcgacttacaggaggaaacttgtacaaatacagttacttccagatggat
gaggacagagctgacttggatggagatcgtttcttggaagatctgaagtataatgtgatg
aaccagactgcctttgatgctattctgcgcgttagagccagcacaggcattcgagcagtg
gacttccttggcaatttctacatgtcgaatacaactgatgtcgagatggcagcaatagac
cgagaacaagctatcaatgttgagattaaacatgacgataaattaaatgaggctgatggt
gcttttgtccaggtagcagtgttgtttacaagtgttggaggacaaagaagattaagaata
cacaatttagctctgaactgctgtactcaaatggctgacctctttagaaacactgaactt
gatactcttgtcaactacatggcaaaacatgctgtgaggacaggcctaaactcgaatccc
aaacaggtgagagaaggcataatgaaccaggtggcccagattttggcttgttacaggaag
aactgtgcctccccatcatctgtaggacagcttattctcccagaatctatgaagctcctt
cctttgtatgcaaactgcatcgtcaaaagcgatgccctacaaggcgggtctgagatatct
actgatgaccgaagctatctaatgcacaaactcaatgctatggatgttgcatcatctcaa
gtcttcttctatcctagtcttatacccatgcatgacttggattctcatggagaccgagtt
ccaacggctgtcaggtgctcaatggagagacttagagacaatggagtatatcttttggaa
aatggcatctcaatgttcctatggattggacataatgtggagcctcactgggtccaacag
gtgttctctgtacaaagtgctgcccagatagatattgataagtgtaaattgcttgaactc
gataatcctgtgtcacagaaattaaaggatatgataaattcaatacgaagtgaacgatgt
agatatatgaagttaacaattgtgcgacaaagagacaagttggagccctggttcaaccac
ttcctggtagaggacaaaggtcacagcggaagtgcttcttatgtggacttcttgtgtcac
attcataaggaaattcggaacttgttgagctaa
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