Ostrea edulis (European flat oyster): 125672018
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Entry
125672018 CDS
T09123
Name
(RefSeq) ATP-dependent RNA helicase DDX24-like isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125672018
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125672018
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Helicases
125672018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
125672018
NCBI-ProteinID:
XP_056018642
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All DBs
Position
4:complement(42083418..42104054)
Genome browser
AA seq
853 aa
AA seq
DB search
MENTKHVKLNSGWKDLDLPPDLLSDAAFESLISCKVMTDYEIVDPNRTKKRRLKENKKSP
KASDTKKQMKLEMRKKVKKEKSSSNKIVSLNTINKVDVSSDLLKSDIKEVTVRKKQKTRS
NCKSGSWTVSSQTTKSGVKNTELATQKLETNKSQIKGRSVTTKGDKSDKARSSHDVENTA
KKRKKENAEKTVQNYSSERKKRRMMGESEGDETNSLQNDMLNEKMAAWKNLFVPKKVLQA
LCENEFFSPTPIQAMALPSAIRDKKDIVGAAETGSGKTLAFGIPVIHNILSHKEKEEKNS
SSTDEDDDDGGEDDDDDGKDKEEVEELLEDVSPDEIVQDDEEVEQMEELGCVKVINDADF
SELGFPNSGPAMKKHNKYPLALVLQPTRELAVQVKDHLQVAAAHTDITIAPILGGMSSEK
QKRILKKCPDILVATPGRLWELMEQVPYLSRIDEVDSLVIDEADRMIEKGHFEELTQILA
YINRNGKKKNRRQTFVFSATLTLVHVGPQRSVRKKMTVTEEKKLETLMNRIQMREKPKVI
DLTRKIGTVETLTEARINCTLEEKDLYLYYFLTQYPGRTLVFANSKDCIRRLISIFTLLQ
TNPLPLHADMHQKQRLKNLERFTANDKAVLLASDVAARGLDIPNVEHVIHYQVPQTVENY
VHRSGRTARAMKEGLSVVLISPEDVKNYRKIVHTLNKSEDLPVFPVELHLLSALRKRLNL
AKKIDTEEHRFNKKKRENEWFEKAAKEMDILIDDEELLTDLGDSFELSGRKQDLNGLKNE
LEQMLKQKLAPHSFTGKYLTQSGKLELPAKDEKKDALKVVKKDGKLQHELVQASPSSSRN
LNRKKKSKWKKKN
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggagaacactaaacacgtgaaactgaactccggctggaaagacttggatttaccaccg
gatttactgtcagatgctgcatttgagtcattaatcagctgtaaagtgatgacagattat
gaaattgttgatccaaataggacaaaaaagagaaggttaaaagaaaacaagaagtctccc
aaagcaagtgataccaagaagcaaatgaagttagagatgaggaagaaagttaaaaaggag
aaatcatcaagtaataagatagtgtctctgaataccattaataaagttgatgtatcctca
gacctgttaaagtcagacatcaaagaagttaccgtgagaaagaaacagaaaacaagatca
aactgtaagtcagggtcatggacagtgtcttcacaaacaaccaagagtggtgttaaaaat
acagagttagctacacaaaagttagagacaaacaaatcacaaataaaggggaggagtgtc
acaacaaagggggataagtcagacaaggccagatcaagtcatgatgtggagaacacggcc
aaaaaaaggaaaaaggaaaacgcagagaaaactgttcagaattattcaagtgaaagaaag
aagaggcggatgatgggagaatctgagggagatgaaaccaactctttacagaatgacatg
ttaaatgagaaaatggcagcatggaaaaatttgtttgttccgaaaaaggtgcttcaagcc
ctgtgtgaaaatgaattcttttctccaactccaatccaagctatggctcttcccagtgcc
atcagagacaaaaaggacatagtgggcgcagcagaaactggtagtggaaaaactctggcc
tttggaatccccgtgattcataatatcctctctcataaagagaaagaagagaagaacagc
tcttcaacagatgaagatgatgatgatggaggtgaagatgatgacgatgatgggaaggat
aaagaagaggtagaggaattacttgaggatgtgtcacctgatgagattgtacaggatgat
gaagaagtagaacagatggaggaattaggttgtgtgaaggtgatcaacgatgctgatttt
tctgaacttggctttcctaattctggaccagctatgaagaaacacaataagtatccctta
gctcttgttctccagccaaccagagagctggctgtacaggtcaaagatcacctacaggtg
gcagcagctcacactgacatcacgattgctccaatccttggtggaatgtcatctgagaaa
cagaaaaggattttgaaaaaatgtccggatatcttggtagccacacctggacgattgtgg
gaactcatggagcaggttccatatttgtctcgcatcgatgaagttgacagtttggtgata
gacgaggcagacagaatgattgaaaaaggtcactttgaagaactgactcaaattctggcc
tacataaacagaaatgggaagaagaagaacaggagacagacatttgtgttttcagccacg
ctgaccttagtacatgtaggacctcaacgtagtgtccgcaagaaaatgaccgtcacagag
gagaagaagctagagactctcatgaatcggatccagatgagagagaaacccaaagtaatt
gatttgacaaggaagattgggacagtggaaactctgactgaggcccggataaactgcaca
ctggaggaaaaggacctctatttgtactactttttgacccagtatccaggacgtacactg
gtttttgctaacagtaaggactgcatccgtcgtctcatctccatcttcactctcctccag
acaaaccctctccctctccatgctgacatgcatcaaaaacaaagactgaagaacttggaa
agattcaccgccaatgataaagccgtattgttggcgtcagatgttgccgctagagggctg
gacattcctaatgtcgaacacgtgattcactaccaggttccgcaaactgtggagaattac
gttcacaggagtggtagaacagcacgggctatgaaggagggtttgagtgtagtgcttatc
tcaccagaggatgttaagaattacagaaagattgtccacactctcaataaaagcgaggat
ctcccagtatttccggtcgaacttcatcttttatcagctctgaggaagagactgaatttg
gcgaaaaagattgatacagaggagcataggtttaacaagaaaaagagagagaacgaatgg
tttgaaaaagcagcaaaggaaatggacatattgatagacgatgaggagcttctaactgac
ctgggggattcatttgagttgtcaggaaggaaacaggatttaaatggtttaaaaaatgag
ctggaacagatgttaaaacaaaaactagcgccacactccttcaccggcaaatacctcacc
cagtcggggaagctggagctaccagcaaaggatgagaaaaaagatgctcttaaagttgtc
aaaaaagacgggaaattacagcatgaactcgtgcaggccagtcctagtagcagtcgaaat
ctcaacagaaaaaagaaatcaaaatggaaaaagaaaaattaa
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