Ostrea edulis (European flat oyster): 125672105
Help
Entry
125672105 CDS
T09123
Name
(RefSeq) ubiquitin-protein ligase E3B-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125672105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125672105
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125672105
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
HECT type E3
125672105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
125672105
NCBI-ProteinID:
XP_055995382
LinkDB
All DBs
Position
1:complement(97014552..97074128)
Genome browser
AA seq
1077 aa
AA seq
DB search
MFSKVNPTKKSQFLEQTKALREERAHDKLKHDAAIVIQARVRGFIARRKFHRDICREIDD
ILEVPTDPGADYKPKLKPALEVYRAIQKFFFVFDKDRDRGKFDYLCKYLLASMDTSADNM
KVCYVCLVLNKAVVLPWIAQIKEVLWKCCSFVKCLKAEYHADMKRINLYLTMLITFTNAG
GWKVLKGKLGETLTPGMNQLCNNIMGHLNTKGLYPVLKGLLAQGLSRTKILFNPATLSAI
VNLSLRPLIASNFSENLMTVFILHILSVPALLHHVDVNAGECLNVLITHRIFKRALDLLT
NEQSTRIIFNSLEGSYALCLLANLVGLGMVEVEAADTFLDSLGLVENTQSFMSVVIRLLE
SCKKYVLNKKSNLTNWHPILGWFSQKSDESLNAAMPHVKEQIKLLWSEKMIRILFSDLLT
YVKVEKEQSSAKKEPSPSKNILKKAIDKASSKSTGAKIKLESPLARTTCNTCALFQIMMN
TLSQLKMDILSGISYNQVLLPALWKFLCDLGPNCGLKVFLDFLNQTPNSVIHPIFSLLTV
FCEAATHYIVTLDDMEMYERQKMFKLEDYIKMSKFLNLFVYRVTWHNLIDLKSLESGESD
VYNGAHNLLLLLYERDCRRPYAEKDHWLNRDIKPSSFLKETDRDRAMEVLVKKTPFIIPF
AERVKAFRHRVRIEKESLGLTESAAITPQSTLITVHRSRTVEDGYRQLAQIPSQSMKGVI
RVKFVNEQGLDEAGIDQDGVFKEFLEETIAKVFDPSLSLFKVTTEQKLYPSSTSFIQENH
LHLFDFVGKMLAKAVYEGIVVDVPFAPFFLTQILQHHQSTMYSPLDELPSLDPELAKNLS
YTKHYEGDVSDLDLTFSCDEDCMGRLETHELVPGGKAMPVTNENKILYVHLMAHFRMYRQ
IKEQTAAFRRGFRSVINPDLLLMFSAPEFQKLISGDNTDLDIQDLRRHTRYYGGYHNSHK
VISWLWDIVTNEFTPQERALFLKFVTSCSKPPLLGFAHLEPPFSVRCVEVSDDQDTGDTV
GSVLKGFFNLKKKDPIGRLPTSSTCFNLLKLPNYQKKSTLKDKLRYAITSNTGFELS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtaaagtaaatcccacaaaaaagagccagttcttagaacagactaaggcatta
cgtgaagaaagagctcacgacaaattgaagcatgatgcagccattgtcattcaagctaga
gtccgaggattcatcgctaggcgcaagtttcacagagatatatgtagagagatagatgat
atactggaggttccgacagatccaggggcggactacaaaccaaaactcaagccagcactg
gaagtataccgggcaattcagaaatttttctttgtttttgacaaggacagggatcgcggg
aaatttgattatctttgcaaatatcttttggcctccatggacacaagtgcagacaatatg
aaggtttgctatgtctgtctggtactgaacaaagctgttgtgttaccctggatagctcag
atcaaggaagttttatggaagtgctgtagttttgtcaagtgtttgaaggctgagtaccat
gctgacatgaaaagaatcaacttgtaccttacaatgctgattacattcacaaatgcagga
gggtggaaggtcctcaagggcaaactgggagagacacttactccaggaatgaatcaactt
tgtaacaatataatggggcacctcaatacaaagggattgtatcctgtattaaagggactg
ttagcacaaggattatctaggacgaagattctattcaatcctgccactttgtctgctatc
gtcaacttgtctttaaggcctttgattgcctccaacttctctgagaacttaatgactgtg
ttcattcttcacatcctatcagtaccagctcttcttcatcatgtggacgtaaatgctggg
gagtgcctaaatgttctcatcacacatcggattttcaaacgagctttggatttgctgact
aatgaacagagcaccaggataatcttcaattccctggagggaagttatgcactttgtctg
ctagcaaacttggtcggtttaggcatggttgaagtagaggctgcagatacgtttctggac
tctctaggacttgtggaaaatacacagagttttatgtcagtggttattcgcttactggaa
agttgtaaaaaatatgtcctcaataagaagtccaacctaacaaactggcatccgatcctt
ggctggttctcacagaaatcagacgaaagtttaaatgcagcaatgccacatgtgaaagag
cagatcaaattactttggtctgagaagatgatcaggatcttgttttctgacctcttgacc
tatgtaaaggtggagaaagagcaatcatctgcaaagaaggaaccctctccctccaaaaat
atactgaagaaagctatagataaagcctcgtccaagtcgaccggtgccaagatcaaactg
gagagtccactcgcaaggacgacgtgtaacacttgtgccctgtttcagattatgatgaat
actcttagtcagctgaagatggacattctgtcaggtataagttacaatcaggtcctgttg
ccggcattgtggaagttcctctgtgacctgggcccaaactgtgggcttaaagttttcctg
gactttctgaaccagactcccaatagtgttatccatccaatattcagcctgctgactgtg
ttctgtgaggctgcaactcattatattgtaactctagacgatatggagatgtatgaacga
cagaaaatgtttaagttggaagattacatcaagatgagcaagtttctaaatttatttgtg
tacagagtcacctggcacaatcttatagatttgaagagtttggaaagtggagagtcggac
gtttacaatggtgcacacaatcttttgcttctgttgtatgaaagagattgcagaagaccc
tacgctgaaaaagatcactggcttaacagagatatcaaacctagttcattccttaaagaa
actgacagagaccgagctatggaagtgttggtgaagaaaactccgtttatcattccattt
gcagagagagtaaaagccttcagacaccgagtacggatagagaaggaaagtctgggtttg
acagaatccgccgccattacacctcagtccacactcatcactgtgcacaggagcaggact
gtggaggatggctacagacagttggctcagattccctcgcagtccatgaagggagtgatt
cgggtgaaattcgtgaatgaacaaggtctggatgaagctgggattgatcaagatggagtc
ttcaaggagtttttagaggaaaccatagctaaagtgtttgatccctccctcagcttgttc
aaggttaccacagaacaaaagctatatccttcatcaacttcctttattcaagaaaaccat
cttcatctttttgattttgtggggaaaatgttggccaaagcagtgtatgagggtatagtt
gtggatgtaccctttgctcccttttttctgacccagattctacaacatcaccagagcacc
atgtacagtcctctagatgaacttccatctctagatccagagctagcaaagaatctttcc
tacaccaagcattatgaaggagatgtaagtgaccttgacttgaccttctcctgtgatgag
gattgtatgggaagattagagacacacgaacttgttcctggtgggaaagcaatgccagta
accaatgaaaataaaatactgtacgttcaccttatggcccatttccggatgtatcgacaa
atcaaggagcagacggcagcattcagaagaggatttcgatcagtcatcaatccagatttg
ctgttgatgttctctgctccggaatttcagaaacttatatctggagataatactgacctg
gatattcaagatctcagacgtcacacccgatactatggagggtaccataacagccacaag
gtcatcagctggctgtgggatattgtcactaatgaatttactcctcaggagagggcttta
ttcctcaagtttgtgactagttgctccaaacctcctttattaggattcgcccacctggaa
cctccgttttctgttcgttgtgtagaagttagcgatgatcaggatacaggagacacagtc
gggagtgtgctgaaaggcttctttaacttgaagaaaaaagaccccataggccgccttccc
acctcctcaacatgcttcaacctccttaaacttcccaactatcagaagaagtcaactctc
aaagacaaactcagatatgccatcacctctaacacaggatttgaactttcttga
DBGET
integrated database retrieval system
