Ostrea edulis (European flat oyster): 125672424
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Entry
125672424 CDS
T09123
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125672424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125672424
Membrane trafficking [BR:
oed04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125672424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
125672424
NCBI-ProteinID:
XP_048764631
LinkDB
All DBs
Position
4:complement(27555992..27577251)
Genome browser
AA seq
1384 aa
AA seq
DB search
MADQHSRYNSSPNGPQTSNPYAQTMPSGHLGGMQSKNLQGQNMNTSQMNFVGNIPSTRAP
MSYNASLNGHGTPPPVNMPPMQRMQPPMGLPVNRFQPPMMNVSAPTQTFMNGPPNRPLNA
NSSLNSSVAQPSLSSSGNFPIGISSAPVPGMPGSISNNAVNTFNAGQTFSHSNSPIPPSL
STQPPGSVSEQRTSSQQRTDTPPTEGGLPVPFHGQGQYSHQVGMSLTPGLTPNNSEPTSR
KSSRAPSPIETQSYDALEGGDFSNIQNQSFPGSGETRQNPQNQVPPVANHAFSQGNPNRG
SPLTTGNPSTAIGGPPSTPRSNPAEQGGAFTSYQSKPGPQGPMIRPHGMSQMGNPQRMGA
PSVSYAGQPPRQPQAGVGQQGIGAPGSNMQPTGPQRTTSAPSPFSAPQPMGIPPASMGGY
VPPSSFGGQQPPRGMLPTPVQGSFPPTSSSGQQPPVGGPPLSVAGGMYNNPGPPSGPAGV
PPPRAPMSSPPGMPPMPRPGPPTGGPPAMPGLYQQPGMLPVSSSAPPTSYGTTQMPPAGF
PPQTQPGQIGSTPSRPKYPQMPTSPPTTWQPSQNPPQFSQPGGYQPNAQPGSFPPSQFGS
NQAGSGQGGMPPAAPGGFPMTSQPGSLSASFNSMSLQDRVVNLLNEKNLLPPEGMEVVKP
RLNNEYKKVNCQADVFRCTLTAIPQTSSLLNKARLPLGILIHPFKDLSQLPVIQSSVIVR
CRSCRTYINPFVFFVDSRRWKCNLCYRVNELPDEFSYDPVTKTYGEPQRRPEIKSSTIEF
IAPSDYMLRPPQPSVYLFLLDVSFNAVETGYLSIFCQLLLEEMDKLPGDSRTQIGFLAYD
KALHFFNLAEGLSQPQMLTVSDIDDIFLPCPDNLLVNLQESKDLVMDLLNQIPSLFEGNL
ETGSALGAALLAAHKLVSPVGGRVTVMQTVLPTAGPGSLQSREDPSLRSGKNVANLGPAI
DFYKKLALDCSAQQVAVDLFMLNGQYADIASISCISKYSGGSVYHYPSFHAAKNPSLSEK
YEADLRRYLTRKVGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFGMQMS
IEDSLVDTNTVCFQAALLYTSSKGERRIRVHTLCLPVTNQLSEIYAGADQQAIAGLLAKM
AVDRSVTSSLSDARDALINAAMDSVASFGSTIPPAQRIGSLPISYTLRMLPVFILALLKS
KAFRVGTNTPLDERVFAMQQFKSLPVGQLLKTVYPALYPLHGIENYNTEKRGDMLVPQPP
LLHLSSSNIDRTGVYLMDTLDTIYLYIGSAAPQNFIQEVFDVPDFMSIPDGMIDLPELEN
ERSDLMRNFITDLLESRPGGACFCVIRDDSKRRLQFFERMVEDRTESSMSQYEFLQHILK
QIKS
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaacattctcgttacaacagcagtccaaacggaccgcagacttcaaatccg
tacgcacaaacgatgccatctggccaccttggtggaatgcagagcaaaaacttgcaagga
cagaatatgaatacatctcaaatgaattttgtgggaaatataccaagtactagggctccg
atgagttacaatgcttcattaaatggacatggaacccctcctcctgttaatatgccaccc
atgcagagaatgcaacctccaatgggattgcctgtcaataggtttcaaccccctatgatg
aatgtgtcggcaccaacacagacatttatgaatggtccaccaaatagacctttaaatgca
aattcatctctaaattctagtgtggctcaaccttctctttcatcatctggaaattttccc
attggtatttcatctgcaccagttcctgggatgcctggttcaatttcaaataatgcagtg
aacacttttaatgctggtcagaccttttctcattcaaatagcccgattcctcctagtcta
tctactcaaccaccaggcagtgtgtcagaacaaagaacatcatcacagcagagaacggac
acaccaccaacagagggaggtctaccagtaccttttcatggacaaggtcaatattctcac
caagtgggcatgtcacttactcctggattaacacctaacaattcagagcctacatccagg
aagtcatcgcgagccccgtctccaatagagacgcagtcgtatgatgcattagaaggaggg
gatttctctaacattcaaaatcagagtttcccaggatcaggagaaacaagacagaatcca
cagaaccaagtcccccctgtagcaaatcatgcattcagccaaggaaaccccaacaggggt
tcaccacttaccactgggaatccttcaaccgccattgggggtcctccctctacacccaga
tcaaaccctgcagaacaaggtggtgcatttacttcttaccaaagcaaacctggaccccag
ggtccaatgataagaccacatggaatgtcccaaatgggaaatccccaaagaatgggggca
ccttctgtatcatatgctggtcaaccaccaagacagcctcaagcaggagttggtcaacaa
ggaataggggcaccaggaagtaatatgcagccaacaggtccccaaagaactaccagtgca
ccaagtccattttcagctccacagccaatgggaatccctcctgcatctatgggtggttat
gtaccaccatcttcatttggtggtcagcaacctccaaggggtatgctacctacaccagtg
caaggctcatttccccccacatcatcaagtggtcagcagccaccagttggtggccctcca
ttgtcagtagcaggaggaatgtacaacaatccaggtcctccgtcaggtcccgcaggtgtg
ccaccacccagagctcccatgtcctcaccacctgggatgccacctatgccaagacctggg
ccaccaacaggtggaccgcctgcaatgccaggtttgtaccagcaaccaggtatgttaccg
gtgtcgtcaagtgcaccaccaacatcttatgggacaactcagatgcctccagcagggttt
ccccctcagacacaaccagggcaaattggcagtactccatctcgaccaaagtacccacaa
atgcctacatcacctcctacaacatggcaaccaagccaaaaccctccccagttttctcag
ccaggtggttatcaacctaacgcacagcctgggtcctttcccccaagtcagtttgggtca
aaccaagctgggtcaggacagggaggaatgcctcctgcagcaccaggaggtttccctatg
acctctcagccgggcagtcttagtgccagttttaattctatgtcattacaggacagagta
gtgaacttattgaacgagaagaacctccttccaccggagggtatggaagtggtgaaacca
agattaaataacgagtacaaaaaggtcaactgtcaggcagatgtattccgatgcacacta
actgccatacctcagacttctagcttactgaacaaagccaggctgcctttgggaatatta
attcacccattcaaagatttatcacaacttcctgtgatccagtccagcgtgatagtccgt
tgtcgttcgtgtaggacttacataaatccatttgttttctttgtggattcgcgacgatgg
aagtgtaacctttgttacagagttaatgaattaccagatgagttttcttatgatccggtc
actaaaacttacggcgaacctcagagaagacctgagattaaatcatcaaccatagaattc
atagcgccatcggattacatgctgcgtcctccccagccatcagtctatctctttcttctg
gacgtctcctttaatgctgtggaaactgggtacctgagtattttctgtcagctgttgctg
gaggaaatggacaagttgccaggagactcccggacccagattggctttcttgcgtatgat
aaggcattacacttctttaaccttgcagagggactttcccaaccacagatgttaacagta
tcagatatagacgatattttccttccttgtcctgataatcttctagtcaatttacaagag
agcaaggatctggtaatggatttgttgaatcaaattccatctttgtttgagggaaacctt
gagacaggaagtgctcttggtgctgcattgctggctgcacataagctcgtgagcccagtt
gggggtcgagttacagtcatgcaaacagtgttgccgaccgctggaccgggttctctccag
tccagagaggaccccagtctgaggtcagggaagaatgttgcaaatcttggtccagcaata
gatttttacaagaaattggcactggattgctcagcccaacaagtagcagttgatttgttc
atgttgaatggacagtacgctgatattgcaagtatatcctgtatatctaaatattctggt
gggtctgtctatcattacccatcattccatgcagctaaaaatccatcattatcagagaaa
tatgaagcagatctgagaaggtacctgacgagaaaggtcggatttgaagcggtgatgaga
atcagatgtaccaaaggtttaagcatccacactttccatggaaacttctttgtgcgttcc
actgacctgctgtcactacccaacgtcaacccagatgctgggtttggaatgcagatgtcc
atagaagattctttagttgacacaaatacagtttgtttccaagcagcattactttacaca
tctagtaaaggtgagcgtaggataagagtccacactctgtgcctaccagtgacaaatcag
ctgtctgaaatctacgctggagctgatcagcaggctatagcagggcttctggcaaaaatg
gctgtggacagaagtgtgacctcctccttgtctgatgccagggatgccctgattaatgct
gcaatggattctgtagcatcatttggaagcaccattcctccagctcagaggataggaagt
ctgccaatcagttacactctcagaatgttgccagtttttatcctggcccttcttaaatct
aaagcttttcgagtgggcaccaacacaccccttgatgagcgcgtgtttgccatgcagcag
ttcaagagcttgcccgtgggacagctgctgaagactgtttatcctgccctgtatcctctt
catggcatcgaaaactataatacagagaagagaggagacatgcttgtgccccagccacct
ttacttcacttgtcgtcttctaacattgatcgcacaggtgtctatttgatggacactctg
gacactatttatctgtatattggcagtgctgctcctcagaattttatacaggaagtgttt
gatgtaccagacttcatgtccattccggatggcatgattgacttaccagagctagaaaat
gaaaggtccgacctaatgagaaattttatcacggacctgttggagagcagaccaggaggg
gcctgtttctgtgttatcagagatgacagtaaaagacgtctacagttctttgaacgcatg
gttgaggacagaacagaatcgtccatgtcacagtacgagtttttgcaacatatattgaaa
cagattaagagttga
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