Ostrea edulis (European flat oyster): 125672454
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Entry
125672454 CDS
T09123
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125672454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125672454
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
RNases
125672454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Metalloenzyme
Succ_CoA_lig
Motif
Other DBs
NCBI-GeneID:
125672454
NCBI-ProteinID:
XP_048764665
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All DBs
Position
4:72534318..72561612
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AA seq
650 aa
AA seq
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MTMSSLKRDKRLESKKRKAAAFLQLVKEEDDETEPVKKKMTEESQTNPTAQPSGSTGNKK
SNNFQQMAEEELLKLRQALRERQKAAMEKPKVFLTLEELARENVSHFETDLKEEEIPPLF
ISDVQSLILFAVQGSACRMKPRWCRLLRCTKVTSIVVMVMNGVSNIELEKYPNSFPTIRN
AFQTHIEVVNPSQYAKSVPTELFCVLPPRQQRTLVAKSIKMKQDEKEEESLNKPEDPLKE
TEAEENPLHPALHGDDSFPRTQLLLSTAQLMQEKYPLPVQYSNVNTSDFKFTKEEYLPVN
DKSPMFALDCEMCMTKARQSELTRVSIVNEKLETLYDTLVKPYNRITNYLTKYSGITKEL
LDPVTTRLSEVQKKIQELLPADAILCGQSLGGDLRAVKMYHPYVIDTSCIYNLTGRAGMK
TGLKRLTEMFVREKIQEGTEGHDSVEDSVATMKLVQHKLKHNLNYGDVRMGWTAIDSNPE
EVADEKEPEFKLIKMEESDENIELNPLPKHIISRQSAFFRMEKYFNSMFEVLQKYGRTAA
MVTDQETVKKFGMDNGVIGIESDSDKKTKSLVKSHVQFHDFVYCSFDNYLTHLNENTTEE
KIVHCLEKMDNRVGKILKNVKQNSLVIVIVPGRSNQRQEHSGTTFVKIKE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtcgtcattgaaaagagataaacgattagagtcaaagaaaagaaaagcagct
gctttcctacagctggtaaaggaagaagatgatgagactgaacctgtcaaaaagaaaatg
actgaagaatcccaaacaaatcctacagcacagccttcagggagtactgggaataagaaa
tctaataatttccagcaaatggcagaggaggaacttcttaaacttagacaagctttgagg
gagcgacagaaagctgcaatggaaaagccaaaagtgtttttgacattagaagaattggcc
agagaaaatgtgtcacactttgaaacagatttaaaggaagaggaaatccctcctctgttt
atcagtgatgtacaaagtcttattttgtttgcagtgcaagggtctgcttgtagaatgaaa
ccgagatggtgcagattacttcgatgtacaaaagtgaccagtattgttgtcatggtgatg
aatggagtcagtaacatagagctggagaaatatcccaattcatttcccacaatccgaaat
gcatttcagacacacatagaggtggtgaatccatcacagtatgccaaatcggtgccaaca
gaattattctgcgttttacccccacgacaacagagaacattagttgcaaaatccattaaa
atgaaacaagatgaaaaagaagaggaatctttaaacaaaccagaggatccattgaaggag
actgaagctgaggagaaccccctccacccagctctccatggagacgacagtttccctaga
acacagctccttctgagtacagcccagctaatgcaggaaaagtaccccctgcctgtgcag
tacagtaacgtgaacacgtcagattttaaattcactaaagaagagtaccttccagtcaat
gataagagtccaatgtttgctttagattgtgaaatgtgtatgacaaaagccaggcagtca
gagctgactcgagtgtccattgtgaatgagaagttggagactttatatgatacgctagtc
aaaccgtacaacagaatcaccaattatctcacaaagtatagtggtatcacaaaggaactg
ctggatcctgtaaccacgcgcttgtctgaagtacagaagaaaatccaggaactactgcca
gcagacgccattctgtgtgggcagtcgctggggggagacttacgggctgtcaagatgtat
catccctacgtgatcgatactagctgtatttacaacctcactggacgagccggaatgaag
actggactgaaaagactgacggaaatgtttgttagggagaaaattcaggagggcacagag
ggccacgactctgtagaggattcagtagccacgatgaaactagttcaacacaaactcaag
cataatttaaactacggagacgtgaggatgggatggacggcaatagactctaatcctgaa
gaagtggctgatgagaaagagcctgagttcaaactgatcaaaatggaggaatcagatgaa
aatatcgaacttaaccccctgccaaaacacatcatttctagacaaagcgctttcttcaga
atggagaagtacttcaacagcatgtttgaagttctacagaagtatggcaggacagctgct
atggtaacagaccaggagacagtaaagaagtttggaatggataatggcgtgattggcata
gagtcagactcagacaaaaaaaccaaatcactcgtgaaatctcatgtgcagtttcatgat
tttgtttactgtagttttgacaattatcttacccacttaaatgagaacacaacagaggaa
aaaattgtgcattgcttagagaaaatggacaatagggtggggaagattttgaagaatgtg
aaacagaactctctagtgattgtgatagttcctggacgttccaaccaaagacaggagcat
tctgggactacatttgtcaaaattaaagaatga
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