Ostrea edulis (European flat oyster): 125672592
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Entry
125672592 CDS
T09123
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125672592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125672592
03110 Chaperones and folding catalysts [BR:
oed03110
]
125672592
04121 Ubiquitin system [BR:
oed04121
]
125672592
Enzymes [BR:
oed01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125672592
Spliceosome [BR:
oed03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125672592
Complex C
U4/U6.U5 tri-SnRNP related factors
125672592
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125672592
Chaperones and folding catalysts [BR:
oed03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125672592
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
U-box type E3
125672592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
zf-Nse
U-box
Motif
Other DBs
NCBI-GeneID:
125672592
NCBI-ProteinID:
XP_048764743
LinkDB
All DBs
Position
1:complement(87934953..87951515)
Genome browser
AA seq
522 aa
AA seq
DB search
MGKKQHQKDKLYLTNTEWRTQFGGYKGRSATGENSKFRRLPFSCCSLSFQPFENPLCTKE
GVVFDLMNIVPFLKKYGINPVTGEKLSAKELIKLNFHKNGDGKYHCPVTFKIFNENTHIV
AIKTTGNVFSLDAVERLNIKPSFFRDLLTDEPFTRKDILTLQDPTNVDKFNLNTFYHVKK
NLKYGDEDEDAARKNPMYNLKSVNAETRDVLFELERDYKPAEKKEKEVKKADYLNAAHYS
TGQVAASFTSTVMEPTTRHEAAIIDEDVLRYEIVKKNGKKGYVSLITNYGLLNLELHCDM
VPKTCENFIKLCKKGYYRDTKFHRLIRNFVIQGGDPTGTGTGGESAWGDAFNDEIKPNLT
HTGRGILSMANSGPNTNKSQFFITFRSAKHLDGKHAVFGRCVGGLETLDKVERIEVDKKD
KPKKDIVIEDCRVFVNPYEDADEELALKREEILQKQEEEVRAKRKYVYKKEPEDDAPKAY
KKGIGKYINPTALKRSAVDTPPPTVKKKATVEGATFGNFSSW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaacaacatcagaaagataaattatatctgacaaacacagaatggaggaca
cagtttggtggatacaaagggcggtcggctacaggggagaactccaaattcagacggctg
ccattcagttgctgcagcctctccttccagccattcgaaaaccctctttgtaccaaggaa
ggtgtggtctttgatttaatgaatattgttccatttctcaagaagtatggtataaatcca
gtaacaggggagaaactcagtgcaaaagaattgatcaagcttaattttcacaagaatgga
gatgggaaatatcactgtccagtcacattcaaaatcttcaatgagaatacccacattgtc
gcaatcaagacaacaggaaatgtgttcagcttggatgcagtagagagactgaatattaag
cccagtttcttcagagatttgttaacagatgaaccattcacaagaaaagacatccttaca
ttgcaggatccaacaaatgtggataaattcaatttaaacaccttctatcacgtgaagaaa
aatttaaagtatggagatgaagatgaggatgctgctcggaagaaccccatgtataatctg
aagtctgtcaacgctgagacacgagatgttctgtttgagctggaaagagactacaagcct
gcggaaaagaaagagaaagaagtgaagaaagcagattacctgaatgcagcccactactcc
acaggacaggtggctgcctctttcacatccacagtcatggaacccaccactcgacatgaa
gcagcgataattgacgaggacgtattgcggtatgagatagtgaagaaaaatggcaagaaa
ggttacgtatctctgatcacaaactacggcctgcttaatttggaacttcattgtgacatg
gtaccgaaaacttgtgagaactttatcaaactttgtaagaaaggctactaccgagacaca
aaattccacagactcattcgtaactttgtgatccagggtggggatccaacaggcacggga
acaggcggagaatcagcctggggagatgccttcaatgatgaaatcaaacccaaccttact
cacacaggtcgggggatactgagcatggctaattcaggcccaaacaccaacaagtcacaa
tttttcatcacctttagatcagcaaaacaccttgatggcaaacacgctgtgtttgggaga
tgcgtaggtggtcttgaaactctcgacaaagtggagaggatagaggtggacaagaaagac
aaaccaaagaaagacatagtgatagaagactgtcgtgtgtttgtgaatccttacgaggat
gcagatgaagagctggcattaaaacgggaggaaatacttcagaaacaggaagaggaagtt
agagccaaaaggaaatatgtttacaagaaagaaccagaagacgatgcacctaaagcttat
aaaaaggggattggaaaatacatcaatccgacagcactgaagcggtcagcggtggacacg
ccccctcccacagttaaaaagaaagctacagtagagggggcaacgtttgggaacttcagc
tcctggtga
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