Ostrea edulis (European flat oyster): 125673725
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Entry
125673725 CDS
T09123
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
oed03015
mRNA surveillance pathway
oed03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125673725
09122 Translation
03013 Nucleocytoplasmic transport
125673725
03015 mRNA surveillance pathway
125673725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125673725
03041 Spliceosome [BR:
oed03041
]
125673725
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
125673725
Spliceosome [BR:
oed03041
]
Common components
Common spliceosomal components
Cap binding complex
125673725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
125673725
NCBI-ProteinID:
XP_048766463
LinkDB
All DBs
Position
3:complement(88576812..88580911)
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AA seq
162 aa
AA seq
DB search
MSGFRAKFPSGSIALSSYRDQFYKGSRAEQEKALLTSSTLYVGNLSYYTTEEQIHELFGK
CGDIKRIVMGLDKVKKTPCGFCFMEYYTREDAENAMRYVNGTRLDDRIIRTDWDHGFKEG
RQYGRGKSGGQVRDEYRTDYDEGRGGYGKIVATKINQSRDPM
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtttcgagcaaaatttccctccggttcgatagcccttagctcttacagagac
cagttctacaagggaagccgggcggagcaggagaaagccttgctgacctcctccacattg
tatgttggaaacctctcatattacaccacggaggaacagattcatgaactctttggcaag
tgcggagacattaaacgtatcgtcatgggcctcgacaaagtgaagaaaacaccctgcgga
ttctgctttatggaatattatacaagagaagatgcagagaatgcaatgaggtatgtaaat
ggaacacgactggatgaccgcatcattcggacagactgggaccatggttttaaggaggga
cgtcagtatggacgaggaaaaagtgggggacaggtgcgagatgaatacagaacagattat
gatgaaggaaggggaggctatggaaagattgttgctactaaaattaaccaatctcgtgac
cccatgtga
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integrated database retrieval system
