KEGG   Ostrea edulis (European flat oyster): 125673877
Entry
125673877         CDS       T09123                                 
Name
(RefSeq) methylosome protein 50-like isoform X1
  KO
K13221  methylosome protein 50
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oed03041]
    125673877
Spliceosome [BR:oed03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    125673877
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 125673877
NCBI-ProteinID: XP_048766758
LinkDB
Position
3:19493233..19512139
AA seq 368 aa
MDQIPAAMDRHLDVIQCRKDGGILLGASGLTGRYWLGSLWFYSNPDVAPDVEKCTAGVQL
EAGFKEAVWLDDTKVLVGLDTGGVALWELVDNFHTFVHLSGAVEHDDIVTSVGVVSGGKK
AVSAGADRCVKVWDLENMYSTNTYRAHADVVECVSCHPTDSALFLSCSADGSVFLWDTRK
SRPVSDIGGFPPPILPVDRVDTSPLKHSPKQVVWQPDSHHFAVGGECGQLVVKDTRKAVG
ATLSLDCHSRAVTKLSFCKENPGLLASASEDGTAVVLSIDKESGRQIFQDSSHTDFVTGL
SWQGGDNLFTCSWDSKVKRHCVSKCEQTSEDTVVVRMETDCIEKENVKKKMASISLVCNG
NGAEVEST
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggatcaaatcccggccgccatggatcggcacttagacgtgattcagtgtcgcaaagat
ggtgggatcctgctgggagcctccggattaacgggtcgatactggctgggatctctgtgg
ttctactccaatccagatgtggctccggatgtggagaagtgcactgctggagtgcagctg
gaggccggatttaaggaggctgtgtggctggatgataccaaagtattagtgggattagac
acaggtggtgttgcattatgggaactagtggataatttccacacgtttgtccacctaagt
ggtgcagtcgagcatgacgacattgtgacctcagtgggcgtggtcagtggaggaaagaag
gctgtctctgctggtgctgaccgttgtgttaaagtttgggatttagaaaatatgtactct
acaaacacatacagagctcacgctgacgtggtggagtgtgtcagttgtcatccaacagac
tccgctctttttttgtcatgttcagcggatggcagtgtgtttctctgggacacgcggaaa
tcaagacctgtgtcggatataggtgggtttcctccgccaattctccctgtagatagagta
gacacatcaccactcaaacattcccccaaacaagttgtgtggcagccagactcgcatcat
tttgcagtgggcggagaatgtggacagttggttgtcaaggatacaaggaaggcggttgga
gcaacattgtctctggactgccattcccgagcagtcacaaagttgtcgttttgtaaagaa
aatccaggtcttttagcctcagcttcagaagatggcacagctgtagttttatctatagac
aaagaatctggtagacaaatattccaagacagctcccatactgattttgtgacaggtcta
agctggcaaggaggggacaatctcttcacatgtagttgggactcaaaagtcaaaagacac
tgtgtatcaaagtgtgaacagacttctgaggacactgtggttgttagaatggagacggac
tgtatagaaaaggagaatgtgaagaaaaagatggccagtatttctttagtttgtaatgga
aacggtgctgaagtggaatcgacatga

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