KEGG   Ostrea edulis (European flat oyster): 125673971
Entry
125673971         CDS       T09123                                 
Name
(RefSeq) PH-interacting protein-like
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oed04121]
    125673971
Ubiquitin system [BR:oed04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     125673971
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Vps41 Auxin_resp Gly_acyl_tr_N eIF2A Zap1_zf1
Other DBs
NCBI-GeneID: 125673971
NCBI-ProteinID: XP_048766891
LinkDB
Position
3:38030535..38071834
AA seq 1800 aa
MSGHVPGSSTSSSVTEELYFLIARFLAQGPCRGAAEVLQRELKENKLLPKRIDWEGREHE
RSYENLVELNRHIKSDHLLKICQRLGPLLDKEVKPSVCGVQSLLGAGSQSLLRTKEGIEN
PVWTPPTHVVTHHQRPLHPPKNLVCPEFVYVMRGREMSGQARNDHTCPNHFYAKINMHAR
KLGHLSAVYCVSFDRTGHYIFTGADDALIKIWRACNGRLLATLRGHNSEITDIAVNYENT
LLASGSCDKTIRVWCLRTKAPIAVLQSHTGTITSLQFCPQSRSESRVLMSTGGDGCVCFW
VWDMTTNTFNPKPHKFIERSRAGAQMLCSSFSPGGVFLATGSADHVIRVYFLHATKPEKI
CELESHSDRVDSICYCNHGNRFVSGSKDGTARIWRYDRQEWKAMVLYMNTTLESIKKTDL
EDVKKFRVTMVSWNMDDSFVITAVSDFSIKVWNSHSGSLVHILKAHEDEIFVLEHSPAEP
RIMLSAGHDGIIVIWDLHKGRKIKSFFNMIEGQGHGAVFDCKFAPDGLSYASTDSHGHIL
LFGFGSNEKHKKIPEEVFFHTDYRPLMRDANNYVLDEQTQQPPHLMPPPFLVDIDGNPYP
PIYQKLVPGREHCNNEQLVPQMQVNEEGSQEVVGDLEALIDDNHSEDLPRAEPLPGEPPP
QDNRRNIDNLIQQLQREQDQRIAREGLYHLGSPPPPGGSPRVNRSNSVGNVGLRRTGERE
GVRQSLGNISQRATQSDIAALSRRVVIKELDTAAILRGEDMRMAYANEEVKLFTMERKKK
PCIYDAECSDSGSNMKTRRKHKNRRENVGNQRENEEVATNRLVTRALYDTEEEEEEENAE
ASNSDVMFSSDNDNDDGESSGYSDWMGDAGIQPPKRKSKRQIKRRKLSSSEDEEEEDVDD
EDDVNYDEESTRDSARSSSSRRQQPKRKKPPPPTRKKPSKNKRRKEKIVKKMEDITELPE
EFRPPEWLTDVIPRKSPYVPQMGDDVMYFKQGHELYLLAVKKRNVYKLDIRKSQPWHVNP
NLREQEYMKIVGIKYEVRPPRLCCLKMAYVDLETGKPTRNSFTFKYHDMPDVIDFIVLKQ
SYDTAMKRKWKTGDRFRSMIDDAWWFGSIVSQSPYEAIYPDSMFQCFIVNWDNGETERLS
PWDMEPVDEDHLPARNESSVPVQPQELRSLMYTPVKGEWPVCGRDAECDRIAHGMESVMQ
HSIAEQFLTPVDLNTFPIYAIIIEYLIDLTTIKSRLENRFYRRVNALQFDIRYIEHNAIA
FNEPGTPIVKSARILTEALLTFTSDTDCIDPMPILNQLCHQEKIGGVSSGSDSEGNKHKH
FDDNKPSTSTKKKSPPTVTKTPDSWKSDCLNLLETVFQCEDSNPFRFPVNPDEFPDYFDI
VEHPMDLSTVKEYLLSDRYSNPNNLFKDFRLIFSNSKIFNTNKRSRIYAMTLRLSALVEE
KMKEIINGWHLAIKHKKISTRLSQSNYNSNMSNAYSTRSCRSQPRRMAATAASSNIRASS
LNGEAGPSTSRTPENTQDSDLNTSATIIEVDDVEMEDDDDDEDYAPVKAKTSSPRKRPVR
KPVVENNHFDSDTEIEEEVEEPDDDKTESEEEEPAVRNVSRSTKGKGKRLLTNGNSKNHY
TTRASTGSIKVKHFKKSGSYSESDSESQSSDKGSAAASNDSSSESSSDSKTESDSKSSDS
EQSPKAPPKRMAPRLRTELDSGRSKLNKNQGGKGREKAGTSGTRRTRNQGKRTVRYQEDS
DYEYGDSSVSSSHRTRKRARIMVSDEDSDTEESDGNSEVMRSSRGRIRKLTPRAMASLKQ
NT seq 5403 nt   +upstreamnt  +downstreamnt
atgtcaggtcatgttcctggatcatcgacctcatcatccgtgacagaagagctgtatttt
ctcatcgcccggtttcttgcccagggaccttgccgtggtgccgcagaggttttacaaagg
gaattgaaggaaaacaagcttttaccgaaaagaatcgactgggaaggcagagaacacgaa
agaagttatgaaaatttggtggaattgaaccgacacattaaatccgatcacctgttgaag
atatgccagcgtttgggacccttgttggacaaagaggtcaaacccagtgtctgtggtgtc
cagtcactgctaggggccgggagccagtccctcctcagaaccaaagagggtatagaaaac
ccagtatggaccccacccacccacgtggtgacccaccaccagcgccccctccatcctcct
aaaaaccttgtctgtccagaatttgtttacgtgatgcggggaagagagatgtcaggacaa
gctcgtaatgaccacacatgtcctaaccatttctacgccaagatcaacatgcatgcacga
aagctcggccatttatctgctgtgtactgtgtatcattcgacagaacagggcactacatc
tttacaggagcagacgatgctttgataaaaatttggagggcgtgtaatggccgtctcttg
gccacactcaggggacataactctgagatcacagacattgctgtgaattacgagaacaca
ctactggcatcaggcagctgtgataaaacaatcagggtgtggtgtctgaggacgaaagcc
cccatagcagtactgcagagtcatacagggaccatcacatcactacagttctgccctcag
agccggagcgagtctcgggtgttgatgtccacaggaggagatggttgtgtctgtttttgg
gtgtgggatatgacaaccaacaccttcaatcctaaacctcacaagtttatagagcggtcg
agggctggagcccagatgttgtgttcctcattcagtccagggggagtgttcctagcgaca
ggaagtgctgatcatgtgatcagggtgtacttcttgcatgccacaaaaccagaaaagatc
tgtgaattggagtctcattctgacagagtagacagtatttgttactgtaaccatggcaac
aggtttgtcagtgggagtaaggatggaacagccagaatatggagatatgacagacaggag
tggaaagcaatggttctttatatgaatacaacactggagagtataaagaaaactgatttg
gaagatgtcaaaaagtttcgagtaaccatggtttcgtggaacatggatgattcatttgtc
ataacagctgtcagtgatttctccatcaaagtgtggaattcccactcaggaagcctggtc
catatcctcaaagctcatgaagacgagatctttgtgttagagcacagccctgctgaacct
cggataatgttaagtgcagggcatgatgggatcattgtcatctgggacctccacaaggga
cggaaaatcaagtctttcttcaatatgattgaaggccaggggcatggtgctgtgtttgac
tgtaaatttgccccagatggactgagctatgcgtccacagactcacatggacacatacta
ttgtttggatttggttcaaatgaaaaacacaaaaagatcccagaggaagtgtttttccac
acagattaccgaccactgatgcgtgacgctaataactatgttctggatgaacaaacacag
cagcctccacatttaatgcccccacctttcttggtggacatcgatggtaatccttaccca
ccaatctaccagaaacttgtgccaggcagggaacactgcaataacgaacagctggtacct
cagatgcaggtcaatgaggaaggttctcaggaggtagttggagaccttgaagccctgata
gatgacaaccactcagaggatcttcctagagctgagcccctcccaggcgaacctccaccc
caggacaaccgacggaatattgacaacttgatccaacagttacaaagggagcaggatcag
agaatagccagagagggactctatcacctgggaagtcccccaccccctggaggttcccca
agggtcaacaggtcaaactcagtgggcaatgttggactgaggagaactggagaaagagaa
ggagtgcgacagtccctgggtaatatttcccagagggcaacacagtctgatatcgcagct
ttgagtcgcagggttgtcatcaaggaactagacactgctgcaatattgaggggtgaagat
atgagaatggcttatgcaaatgaggaggttaaacttttcactatggagagaaagaagaaa
ccatgtatttacgatgctgaatgcagtgattcaggatccaacatgaaaaccaggcgcaaa
cataaaaaccgtcgggaaaatgttggaaaccagcgagaaaatgaggaggtggcgaccaac
cgactggtgacaagggccctgtatgacacagaggaggaagaggaagaggaaaatgcagag
gcttcgaattctgatgtgatgtttagcagtgacaatgataatgacgatggggagtctagt
gggtactcagactggatgggagatgctggtatccagcctccgaagcgcaagtccaaacgg
cagatcaaacgacgaaaactttcttcctccgaagatgaggaggaagaagatgttgatgat
gaagatgatgttaattacgatgaagagagcactcgtgattctgccagaagttctagtagt
cgtcgacaacaacccaagaggaaaaagccacccccacccacccgtaaaaagccatcgaaa
aataaacgaagaaaagaaaaaattgtgaagaagatggaggatataacagaactgcctgag
gagtttcggcctcccgagtggctgactgacgtcattcccaggaagtcaccatatgtgcct
cagatgggagatgatgtcatgtatttcaaacagggtcatgaactctacctccttgctgtg
aagaaacgcaatgtttataaattggatattcgcaagagccaaccctggcatgtgaatcca
aacttaagggaacaagagtatatgaagattgtaggaatcaaatacgaagttcgcccgcct
cgtctctgctgtctgaaaatggcctatgttgacctagaaactggaaaacctacgcggaat
tccttcacatttaagtaccatgatatgcctgatgttattgatttcattgtcctgaaacag
tcctatgacactgccatgaagaggaagtggaaaacaggtgacagatttcgatccatgatt
gatgatgcatggtggtttggctccattgtgagtcagagtccatacgaagcaatttaccct
gacagtatgttccagtgttttattgtcaactgggacaatggtgaaacagagagactgagt
ccatgggatatggaaccagtggatgaagaccatctgccggctcgtaatgagtcctctgtg
cccgtccagccacaggagttacggtccctgatgtacactcctgtaaagggggagtggccc
gtgtgtgggcgggatgcagagtgtgaccgtatcgcccatggaatggaaagtgtcatgcag
cattccattgccgaacaattcctcaccccagtggaccttaacaccttcccaatctatgct
atcattatagaatatctcattgatctcacaaccattaagtcaagactcgagaatcggttc
tacaggagagtgaatgccctccagtttgacatcagatacattgagcacaatgccatagca
ttcaacgaaccaggaactcctatagttaaaagtgccagaattcttacggaggccctgctc
acgttcactagtgacacagactgcatagatcccatgccaatccttaatcagctctgtcat
caagagaaaatagggggtgtgtcctcaggaagtgattcagaaggcaataaacacaaacat
tttgatgataataagcctagcaccagcactaagaagaagtcccctcccacagtcaccaaa
acgcccgattcctggaagtccgactgcctcaaccttctggagacagtgtttcagtgtgag
gattctaatccattcaggttcccggtgaatccagatgaattcccagattacttcgacatc
gtagagcaccccatggatctttccactgttaaagaatacttgttgagtgatagatattcc
aaccctaacaatcttttcaaggacttcaggctcatcttctccaattccaagatattcaac
accaataaacgctccaggatatatgccatgaccttgagattgtctgctttggtggaagag
aaaatgaaggagattataaatggatggcacttggccatcaagcacaaaaaaatctcaact
cgtctatctcaaagcaactacaactctaacatgtctaatgcatacagcaccaggagttgt
agaagtcagccacgacgaatggcagctactgctgcgtcatccaacatccgagctagttct
ctcaatggtgaagctggaccttccacctctaggaccccagaaaacactcaggactctgat
ctcaacacatctgccaccatcatagaggtggatgatgttgaaatggaggatgatgatgat
gatgaagattacgcaccagttaaggcgaagacatcttccccaagaaagaggccagtaagg
aagccagtggtggagaacaaccactttgattctgacactgaaatagaggaagaagtggag
gaaccagacgatgataaaacagagagtgaggaggaagagccagctgtccgcaacgtctca
aggtcaaccaagggcaagggtaaaaggcttttaacaaatggaaattcaaaaaaccattac
acaactcgagcatctacagggtccatcaaggttaaacacttcaagaagagtggatcttac
tcagaatcggactccgagtcacagtccagtgacaagggatcagcagcagcatctaacgac
tcatcatcagaatcatcatcagactcaaaaacggaatccgactctaagtcaagtgactct
gaacaaagcccaaaagcacctccaaagcgaatggctcctcgattacgaactgaacttgac
tccggtagaagtaaactgaacaaaaatcaaggagggaagggacgcgagaaagcaggtacc
tcaggaactcgacgaactaggaatcagggaaaacgaaccgtccgttatcaagaagatagt
gattatgaatatggtgacagtagtgtgtcatcttcacacaggactagaaagagggctcgt
attatggtgtctgatgaagacagtgacactgaagagtctgatggaaattcagaggttatg
agaagtagtaggggccgaatcaggaagcttactccacgggccatggctagtcttaaacaa
taa

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