Ostrea edulis (European flat oyster): 125673971
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Entry
125673971 CDS
T09123
Name
(RefSeq) PH-interacting protein-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125673971
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125673971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Auxin_resp
Gly_acyl_tr_N
eIF2A
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
125673971
NCBI-ProteinID:
XP_048766891
LinkDB
All DBs
Position
3:38030535..38071834
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AA seq
1800 aa
AA seq
DB search
MSGHVPGSSTSSSVTEELYFLIARFLAQGPCRGAAEVLQRELKENKLLPKRIDWEGREHE
RSYENLVELNRHIKSDHLLKICQRLGPLLDKEVKPSVCGVQSLLGAGSQSLLRTKEGIEN
PVWTPPTHVVTHHQRPLHPPKNLVCPEFVYVMRGREMSGQARNDHTCPNHFYAKINMHAR
KLGHLSAVYCVSFDRTGHYIFTGADDALIKIWRACNGRLLATLRGHNSEITDIAVNYENT
LLASGSCDKTIRVWCLRTKAPIAVLQSHTGTITSLQFCPQSRSESRVLMSTGGDGCVCFW
VWDMTTNTFNPKPHKFIERSRAGAQMLCSSFSPGGVFLATGSADHVIRVYFLHATKPEKI
CELESHSDRVDSICYCNHGNRFVSGSKDGTARIWRYDRQEWKAMVLYMNTTLESIKKTDL
EDVKKFRVTMVSWNMDDSFVITAVSDFSIKVWNSHSGSLVHILKAHEDEIFVLEHSPAEP
RIMLSAGHDGIIVIWDLHKGRKIKSFFNMIEGQGHGAVFDCKFAPDGLSYASTDSHGHIL
LFGFGSNEKHKKIPEEVFFHTDYRPLMRDANNYVLDEQTQQPPHLMPPPFLVDIDGNPYP
PIYQKLVPGREHCNNEQLVPQMQVNEEGSQEVVGDLEALIDDNHSEDLPRAEPLPGEPPP
QDNRRNIDNLIQQLQREQDQRIAREGLYHLGSPPPPGGSPRVNRSNSVGNVGLRRTGERE
GVRQSLGNISQRATQSDIAALSRRVVIKELDTAAILRGEDMRMAYANEEVKLFTMERKKK
PCIYDAECSDSGSNMKTRRKHKNRRENVGNQRENEEVATNRLVTRALYDTEEEEEEENAE
ASNSDVMFSSDNDNDDGESSGYSDWMGDAGIQPPKRKSKRQIKRRKLSSSEDEEEEDVDD
EDDVNYDEESTRDSARSSSSRRQQPKRKKPPPPTRKKPSKNKRRKEKIVKKMEDITELPE
EFRPPEWLTDVIPRKSPYVPQMGDDVMYFKQGHELYLLAVKKRNVYKLDIRKSQPWHVNP
NLREQEYMKIVGIKYEVRPPRLCCLKMAYVDLETGKPTRNSFTFKYHDMPDVIDFIVLKQ
SYDTAMKRKWKTGDRFRSMIDDAWWFGSIVSQSPYEAIYPDSMFQCFIVNWDNGETERLS
PWDMEPVDEDHLPARNESSVPVQPQELRSLMYTPVKGEWPVCGRDAECDRIAHGMESVMQ
HSIAEQFLTPVDLNTFPIYAIIIEYLIDLTTIKSRLENRFYRRVNALQFDIRYIEHNAIA
FNEPGTPIVKSARILTEALLTFTSDTDCIDPMPILNQLCHQEKIGGVSSGSDSEGNKHKH
FDDNKPSTSTKKKSPPTVTKTPDSWKSDCLNLLETVFQCEDSNPFRFPVNPDEFPDYFDI
VEHPMDLSTVKEYLLSDRYSNPNNLFKDFRLIFSNSKIFNTNKRSRIYAMTLRLSALVEE
KMKEIINGWHLAIKHKKISTRLSQSNYNSNMSNAYSTRSCRSQPRRMAATAASSNIRASS
LNGEAGPSTSRTPENTQDSDLNTSATIIEVDDVEMEDDDDDEDYAPVKAKTSSPRKRPVR
KPVVENNHFDSDTEIEEEVEEPDDDKTESEEEEPAVRNVSRSTKGKGKRLLTNGNSKNHY
TTRASTGSIKVKHFKKSGSYSESDSESQSSDKGSAAASNDSSSESSSDSKTESDSKSSDS
EQSPKAPPKRMAPRLRTELDSGRSKLNKNQGGKGREKAGTSGTRRTRNQGKRTVRYQEDS
DYEYGDSSVSSSHRTRKRARIMVSDEDSDTEESDGNSEVMRSSRGRIRKLTPRAMASLKQ
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcatgttcctggatcatcgacctcatcatccgtgacagaagagctgtatttt
ctcatcgcccggtttcttgcccagggaccttgccgtggtgccgcagaggttttacaaagg
gaattgaaggaaaacaagcttttaccgaaaagaatcgactgggaaggcagagaacacgaa
agaagttatgaaaatttggtggaattgaaccgacacattaaatccgatcacctgttgaag
atatgccagcgtttgggacccttgttggacaaagaggtcaaacccagtgtctgtggtgtc
cagtcactgctaggggccgggagccagtccctcctcagaaccaaagagggtatagaaaac
ccagtatggaccccacccacccacgtggtgacccaccaccagcgccccctccatcctcct
aaaaaccttgtctgtccagaatttgtttacgtgatgcggggaagagagatgtcaggacaa
gctcgtaatgaccacacatgtcctaaccatttctacgccaagatcaacatgcatgcacga
aagctcggccatttatctgctgtgtactgtgtatcattcgacagaacagggcactacatc
tttacaggagcagacgatgctttgataaaaatttggagggcgtgtaatggccgtctcttg
gccacactcaggggacataactctgagatcacagacattgctgtgaattacgagaacaca
ctactggcatcaggcagctgtgataaaacaatcagggtgtggtgtctgaggacgaaagcc
cccatagcagtactgcagagtcatacagggaccatcacatcactacagttctgccctcag
agccggagcgagtctcgggtgttgatgtccacaggaggagatggttgtgtctgtttttgg
gtgtgggatatgacaaccaacaccttcaatcctaaacctcacaagtttatagagcggtcg
agggctggagcccagatgttgtgttcctcattcagtccagggggagtgttcctagcgaca
ggaagtgctgatcatgtgatcagggtgtacttcttgcatgccacaaaaccagaaaagatc
tgtgaattggagtctcattctgacagagtagacagtatttgttactgtaaccatggcaac
aggtttgtcagtgggagtaaggatggaacagccagaatatggagatatgacagacaggag
tggaaagcaatggttctttatatgaatacaacactggagagtataaagaaaactgatttg
gaagatgtcaaaaagtttcgagtaaccatggtttcgtggaacatggatgattcatttgtc
ataacagctgtcagtgatttctccatcaaagtgtggaattcccactcaggaagcctggtc
catatcctcaaagctcatgaagacgagatctttgtgttagagcacagccctgctgaacct
cggataatgttaagtgcagggcatgatgggatcattgtcatctgggacctccacaaggga
cggaaaatcaagtctttcttcaatatgattgaaggccaggggcatggtgctgtgtttgac
tgtaaatttgccccagatggactgagctatgcgtccacagactcacatggacacatacta
ttgtttggatttggttcaaatgaaaaacacaaaaagatcccagaggaagtgtttttccac
acagattaccgaccactgatgcgtgacgctaataactatgttctggatgaacaaacacag
cagcctccacatttaatgcccccacctttcttggtggacatcgatggtaatccttaccca
ccaatctaccagaaacttgtgccaggcagggaacactgcaataacgaacagctggtacct
cagatgcaggtcaatgaggaaggttctcaggaggtagttggagaccttgaagccctgata
gatgacaaccactcagaggatcttcctagagctgagcccctcccaggcgaacctccaccc
caggacaaccgacggaatattgacaacttgatccaacagttacaaagggagcaggatcag
agaatagccagagagggactctatcacctgggaagtcccccaccccctggaggttcccca
agggtcaacaggtcaaactcagtgggcaatgttggactgaggagaactggagaaagagaa
ggagtgcgacagtccctgggtaatatttcccagagggcaacacagtctgatatcgcagct
ttgagtcgcagggttgtcatcaaggaactagacactgctgcaatattgaggggtgaagat
atgagaatggcttatgcaaatgaggaggttaaacttttcactatggagagaaagaagaaa
ccatgtatttacgatgctgaatgcagtgattcaggatccaacatgaaaaccaggcgcaaa
cataaaaaccgtcgggaaaatgttggaaaccagcgagaaaatgaggaggtggcgaccaac
cgactggtgacaagggccctgtatgacacagaggaggaagaggaagaggaaaatgcagag
gcttcgaattctgatgtgatgtttagcagtgacaatgataatgacgatggggagtctagt
gggtactcagactggatgggagatgctggtatccagcctccgaagcgcaagtccaaacgg
cagatcaaacgacgaaaactttcttcctccgaagatgaggaggaagaagatgttgatgat
gaagatgatgttaattacgatgaagagagcactcgtgattctgccagaagttctagtagt
cgtcgacaacaacccaagaggaaaaagccacccccacccacccgtaaaaagccatcgaaa
aataaacgaagaaaagaaaaaattgtgaagaagatggaggatataacagaactgcctgag
gagtttcggcctcccgagtggctgactgacgtcattcccaggaagtcaccatatgtgcct
cagatgggagatgatgtcatgtatttcaaacagggtcatgaactctacctccttgctgtg
aagaaacgcaatgtttataaattggatattcgcaagagccaaccctggcatgtgaatcca
aacttaagggaacaagagtatatgaagattgtaggaatcaaatacgaagttcgcccgcct
cgtctctgctgtctgaaaatggcctatgttgacctagaaactggaaaacctacgcggaat
tccttcacatttaagtaccatgatatgcctgatgttattgatttcattgtcctgaaacag
tcctatgacactgccatgaagaggaagtggaaaacaggtgacagatttcgatccatgatt
gatgatgcatggtggtttggctccattgtgagtcagagtccatacgaagcaatttaccct
gacagtatgttccagtgttttattgtcaactgggacaatggtgaaacagagagactgagt
ccatgggatatggaaccagtggatgaagaccatctgccggctcgtaatgagtcctctgtg
cccgtccagccacaggagttacggtccctgatgtacactcctgtaaagggggagtggccc
gtgtgtgggcgggatgcagagtgtgaccgtatcgcccatggaatggaaagtgtcatgcag
cattccattgccgaacaattcctcaccccagtggaccttaacaccttcccaatctatgct
atcattatagaatatctcattgatctcacaaccattaagtcaagactcgagaatcggttc
tacaggagagtgaatgccctccagtttgacatcagatacattgagcacaatgccatagca
ttcaacgaaccaggaactcctatagttaaaagtgccagaattcttacggaggccctgctc
acgttcactagtgacacagactgcatagatcccatgccaatccttaatcagctctgtcat
caagagaaaatagggggtgtgtcctcaggaagtgattcagaaggcaataaacacaaacat
tttgatgataataagcctagcaccagcactaagaagaagtcccctcccacagtcaccaaa
acgcccgattcctggaagtccgactgcctcaaccttctggagacagtgtttcagtgtgag
gattctaatccattcaggttcccggtgaatccagatgaattcccagattacttcgacatc
gtagagcaccccatggatctttccactgttaaagaatacttgttgagtgatagatattcc
aaccctaacaatcttttcaaggacttcaggctcatcttctccaattccaagatattcaac
accaataaacgctccaggatatatgccatgaccttgagattgtctgctttggtggaagag
aaaatgaaggagattataaatggatggcacttggccatcaagcacaaaaaaatctcaact
cgtctatctcaaagcaactacaactctaacatgtctaatgcatacagcaccaggagttgt
agaagtcagccacgacgaatggcagctactgctgcgtcatccaacatccgagctagttct
ctcaatggtgaagctggaccttccacctctaggaccccagaaaacactcaggactctgat
ctcaacacatctgccaccatcatagaggtggatgatgttgaaatggaggatgatgatgat
gatgaagattacgcaccagttaaggcgaagacatcttccccaagaaagaggccagtaagg
aagccagtggtggagaacaaccactttgattctgacactgaaatagaggaagaagtggag
gaaccagacgatgataaaacagagagtgaggaggaagagccagctgtccgcaacgtctca
aggtcaaccaagggcaagggtaaaaggcttttaacaaatggaaattcaaaaaaccattac
acaactcgagcatctacagggtccatcaaggttaaacacttcaagaagagtggatcttac
tcagaatcggactccgagtcacagtccagtgacaagggatcagcagcagcatctaacgac
tcatcatcagaatcatcatcagactcaaaaacggaatccgactctaagtcaagtgactct
gaacaaagcccaaaagcacctccaaagcgaatggctcctcgattacgaactgaacttgac
tccggtagaagtaaactgaacaaaaatcaaggagggaagggacgcgagaaagcaggtacc
tcaggaactcgacgaactaggaatcagggaaaacgaaccgtccgttatcaagaagatagt
gattatgaatatggtgacagtagtgtgtcatcttcacacaggactagaaagagggctcgt
attatggtgtctgatgaagacagtgacactgaagagtctgatggaaattcagaggttatg
agaagtagtaggggccgaatcaggaagcttactccacgggccatggctagtcttaaacaa
taa
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integrated database retrieval system