Ostrea edulis (European flat oyster): 125674140
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Entry
125674140 CDS
T09123
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125674140
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
90S particles
Other 90S particles
125674140
Pre-60S particles
Other pre-60S particles
125674140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
WD40_RFWD3
EIF3I
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_WDR19_1st
ANAPC4_WD40
MIOS_WD40
Nucleoporin_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
SPT6_acidic
Beta-prop_ACSF4
gp12-short_mid
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
125674140
NCBI-ProteinID:
XP_048767173
LinkDB
All DBs
Position
3:14739092..14763291
Genome browser
AA seq
512 aa
AA seq
DB search
MNIIPCLKWVQRGVAKAIPDKVKLSEDELKRVIEDTKDKIDLVDDEDDDGEDMEEEEISE
DDKHGASKRKMVDDEADIEAKYGLADYDDEDENDVLKGIGDLTYYASNAEDPYVTLKDEG
DSDDEDFEIKATDNLIVVGKAEKDFCCLEVYVYNEDLGNLYVHHDILLSSFPLVVEWLNY
DVGEDKPGSFVAVGTMEPEIEIWDLDVVDSLEPVVVLGTKAKSKKKKKKTDGHTDAVLDL
AWNADVRNVLGSASADCTIKLWDLSEGKPVTTIMQHDDKVQCLAWRPSDSSCLLSGSFDK
TVNMYDCRNPSKDYKTWTLNGEVENILWDKFNQSYFYATTDNGYVFYMDSRLQKPVFLLS
AHDESVTGICQSSSVPGLLITTSTDKTMKVWDIQNNKPSTVLERNLRLNQLFCADVCPEA
PFVFAIGGEKEIKVWDIRESATVRKHFASRAPVGVTMEGDDDVKEEMEEAMKGMMIDKEE
EEDVQTLLGEGATAGPSTKKKKKKKRKSQKQN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacattataccgtgcttaaaatgggttcagcgcggagtagccaaggctattcctgat
aaagttaaactgagtgaagatgaattaaaacgagttatagaagacacaaaagataaaatt
gaccttgttgatgatgaagatgatgatggagaggatatggaggaggaggaaattagtgaa
gatgacaaacacggtgcttctaaacgtaaaatggtcgatgatgaagctgacattgaagca
aaatatggtctggcagactatgatgatgaagatgaaaatgatgtgctgaagggcattggt
gatctgacttactacgcatcaaatgcagaagatccatatgtaactctaaaagatgaggga
gatagcgatgatgaagattttgaaatcaaagccacagataacctgatagtggtagggaaa
gcagagaaagatttctgctgtttagaagtgtatgtatataatgaagatcttgggaatttg
tacgtccaccatgatattttattgtcatcttttcctttggtcgtggagtggctgaattat
gatgttggagaagacaaaccaggaagttttgtagcggtggggacgatggaacctgaaata
gaaatctgggacttagatgtggtagattccttagaacctgtcgtagtgttgggaactaag
gccaagtcaaaaaagaaaaagaaaaaaactgatggtcacacagatgctgttcttgattta
gcttggaatgctgatgttagaaatgttcttggaagtgcgtcagctgattgtacgataaaa
ctgtgggacttatcggagggaaagccggtgacgaccatcatgcaacatgatgacaaggtt
cagtgtctggcctggcgtccatcggattcatcttgtctcctgtctggatcttttgacaag
acagtgaatatgtatgactgtagaaatcccagtaaagattataaaacctggactttaaat
ggtgaagtggaaaatatcctgtgggataaattcaatcagtcctatttttatgccacaaca
gacaatgggtatgtgttctacatggacagtaggctccagaagccggtgttcttactttct
gcacatgatgagagtgtaacagggatttgtcagagttcgtcagtcccaggcttgctgatt
accacctccacagacaagacgatgaaagtctgggatatccagaacaacaagccctccaca
gttttggagcgaaatctcagactgaatcagttgttttgtgctgacgtttgtcctgaagca
ccatttgtgtttgccatcggcggagagaaggaaatcaaagtctgggatattagggaaagt
gcaacagtgaggaaacattttgcatctagggcacctgttggtgtgacaatggaaggagat
gatgatgtgaaggaggagatggaagaagccatgaagggaatgatgattgacaaagaggaa
gaggaggacgttcaaactctgctaggggaaggggccacagcaggcccctcaaccaaaaag
aagaaaaagaagaaacggaaatctcaaaagcagaattaa
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