Ostrea edulis (European flat oyster): 125674185
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Entry
125674185 CDS
T09123
Name
(RefSeq) tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oed04990
]
125674185
Domain-containing proteins not elsewhere classified [BR:
oed04990
]
Other domain-containing proteins
Tubby family proteins
125674185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
SOCS_box
EIF3I
Beta-prop_ELP1_1st
Beta-prop_EML
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
125674185
NCBI-ProteinID:
XP_048767230
LinkDB
All DBs
Position
3:complement(2479224..2568323)
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AA seq
1113 aa
AA seq
DB search
MHVHFEQNNSTRTECTIHSLSWMGKVPDVPDNNGGWKLNRNQYYMEGWLASGNAKGVVGV
TFTTSHCKKYDPPPRSNFNLRGHKSEVTLVRWNEPYQKLATCDVQGAIFVWIKHEGRWST
ELINDRNSQVTDFSWSHDGRMALICYCDGFVLVGSVAGQMYWSSMLNLDQTTITCGVWSP
DDQQVLFGTMDGQIIVLSSTGTMVTQVMVQHGTEIISLTWSCEKFNMDESSMEQNENLTA
PTVTTPKPVDGVLAVCFKSGAIYLMSNYDDLHPRIIYTNLKGSMKLDWSNCGEVLAVGGF
TRLPNLQCQNEVHFYTKEGQLLHRVYLPCQGKPLTALCWGHNDRRLFVAAGFNLHVAWVM
KKVPSLQSLCQRVIQICIKSEKLIRQLPLPVRLHHSVQTMFSPTIKSYIPDPFKLREFIC
SPPPASERLFCTMIRHGEETSGGHYTLYLEYLGGLIPLLKGKRASKLRPDFVIYDPKIGA
KPGDEVQNAPPEFDFEASLTDSDEDIPSDGCGSPRMQRKKRPKIFRPKKVERSITFRTLD
ELLYNDSLPESNKLVEVTSNIWGTKFKLTGLAPFLPDDLGNVLYKTSLLHLQPRQMTITI
TALNTVNQPLSRDPNFTPAGQCDEEGENRSYDEFPNESGDPCAEDGILVSEMCNSELTNK
LTSHVFMDIKLSSNLTNQNEDKVLCDISGNVSSNNNVMNGERLHWSPNMKNRSLSPASES
VAQNNAFNSLDNSVIKDKFIGQGAIPKVRSVAQNDSPSEVTVGIPVGETLVNANNPSSMS
SANMRTSLHNEVSTIMKDGDENRWADLANPGIKFIDEEGTNNRTSENSDNMVGIICDSSR
LTPTLSDNQKRLYLETQTNMDSDVMICDHSTDPSEMGEGSPILGSLEDVHKDSCRNSNVF
SGASCSLFCYDDDVVDPASFTRNNSSLEICHSASLPNSPLHRATDSPMRDIREEILQSTC
KHYSPIFKRKSRHFNPRNFDNEADDRTLEEIKYSQSFKNLETFQKAQLKQKLQKVRKRGE
DRGRSRYPHLGFRQFVMHNKAPLWNENSQVYQLDFGGRVSQESAKNFQIEFRSRQVMQFG
RIGSNAYTLDFQYPFTALQAFAVALANVTQRLK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcattttgagcagaacaactccacgcgaaccgaatgtaccatccactccctg
tcatggatgggaaaggtaccggacgtaccggacaacaatggtggctggaagttgaaccgg
aaccagtattacatggaaggctggctggcgagtgggaatgcaaaaggggtggtgggagtc
acattcaccaccagtcactgcaagaagtatgatccaccacccaggagtaattttaatttg
agaggacacaaaagtgaggtgacgttagttcgttggaatgagccttaccagaaacttgcc
acgtgtgacgtacagggagccatctttgtctggataaaacatgaagggaggtggtccact
gaactcatcaatgacagaaatagtcaggtgacagatttttcctggtctcatgatggaaga
atggccctaatttgttactgtgatggtttcgttctggtggggtcagtggctggacagatg
tattggtcatctatgctaaacctggaccagacaactatcacttgtggggtgtggtctcct
gatgatcagcaggtgctgtttggcacaatggatggacaaatcattgtgctgagttctact
gggaccatggtaacacaggtaatggtgcagcacgggaccgagattatctcccttacctgg
tcctgtgaaaagttcaacatggacgagtcttccatggagcagaatgagaatcttaccgct
ccaactgttacaacaccgaaacctgtggatggagttttagcagtgtgcttcaaaagtggt
gccatatatctaatgtcaaattacgacgacttacatcccaggatcatctacaccaatctc
aaaggatccatgaagttggactggtccaactgtggggaggtgttggctgtaggtggattc
acaagattaccaaaccttcagtgtcagaatgaggtgcatttctacaccaaagagggacaa
ctcttacatagggtttatctcccttgtcagggtaagccactaaccgctctgtgctggggc
cacaatgaccggcgcctgtttgtggcggctgggtttaacctccacgtggcgtgggttatg
aaaaaagttccctctttgcagtcgctgtgtcagagagtcatacagatttgtataaagagt
gaaaaactcatacgacaactacctctgcctgtgaggcttcatcacagtgttcaaaccatg
ttctcaccaaccattaagagctacattccagaccctttcaaactacgagaatttatctgt
tctccgcccccagccagcgagcgactgttctgtaccatgattaggcacggggaggagacc
tcagggggacactatacactgtatctggaatacctagggggactgatccccctgctgaag
gggaaacgggccagcaaacttagaccagactttgtcatctacgatccaaaaattggggca
aaacctggtgatgaagttcagaatgcaccgcctgagtttgattttgaggccagtttgacg
gactcagatgaagatataccctctgatgggtgtgggtctcccagaatgcaacgcaaaaag
cgtcccaagatttttcgaccgaagaaggtggagagatccataaccttccgtacgctcgat
gaacttttgtacaacgacagtcttccagagagtaacaagttggtggaagtgacctccaat
atatggggcaccaagttcaagttgaccgggctggcaccgttccttccggacgacctgggt
aatgttctgtataaaacgagtctcctgcacctccagccacgacaaatgaccattacaatt
actgctctaaatacggtgaaccagccgctgtccagagacccgaactttaccccggctggt
cagtgtgatgaggagggtgaaaacagatcatacgatgaatttccaaatgaatctggtgac
ccttgtgcagaggatggaatactagtgtcggaaatgtgtaacagtgaacttacaaacaaa
cttacaagccatgtatttatggatattaaattatcatcaaatttgaccaatcaaaacgaa
gataaggttttgtgtgacatcagtggaaatgtgagtagtaacaataatgtgatgaatggt
gagcgattgcattggtcaccgaacatgaaaaacaggtctctttctccggcctcggagtcc
gttgctcaaaacaatgccttcaatagtttggataattctgttataaaggataaattcatc
ggtcagggtgcaatcccaaaggtgagaagcgttgctcaaaatgacagtccgtcagaagtg
actgtggggatacctgtcggcgaaacattggttaatgcaaataacccgtcttcaatgtct
agtgctaatatgaggactagtctacataatgaagtgtcgactattatgaaggacggcgat
gagaaccgctgggccgatctagcgaatcccggcatcaaattcatagacgaagaaggaacg
aacaatcgtacctcggagaattcggacaatatggtggggataatttgtgattctagtcgg
ttgacccctaccctgtccgataatcagaagaggttgtatttggaaacacaaacaaatatg
gactccgatgtaatgatctgtgatcacagtacagacccctcggagatgggagaaggcagt
ccgattttagggtcgttggaggatgtacataaagactcgtgcagaaatagcaatgtgttc
tctggtgcttcgtgttccctcttctgttacgacgatgatgtggtggatccagcttctttc
acgcgtaacaattccagtttggaaatctgtcacagtgcctctcttccgaattctccactg
cacagggctacagactcgcccatgagagacatacgggaagaaattttacaaagcacctgc
aagcactatagtcctatatttaaacgaaaatcaagacattttaatcctagaaattttgat
aacgaggctgacgatcgcacgctagaggagatcaagtattcccaaagttttaagaattta
gagactttccaaaaggctcagcttaaacagaagcttcagaaggtgcggaagagaggcgag
gacaggggaagatcaaggtaccctcatctggggtttcgccagtttgtcatgcacaataaa
gctcctctctggaacgagaacagtcaagtataccagctggactttgggggacgggtcagt
caagaatctgccaaaaacttccagatcgagttccgaagtcgtcaggtgatgcagtttggt
aggattgggagtaatgcgtacaccctggattttcagtatccgttcactgcgttacaagcc
ttcgctgtggcgttagctaacgtgacgcagcgactgaaatag
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