Ostrea edulis (European flat oyster): 125675184
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Entry
125675184 CDS
T09123
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oed03036
]
125675184
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125675184
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HDA2-3
DEAD
ERCC3_RAD25_C
UBA
Motif
Other DBs
NCBI-GeneID:
125675184
NCBI-ProteinID:
XP_056013600
LinkDB
All DBs
Position
3:24773001..24807861
Genome browser
AA seq
1006 aa
AA seq
DB search
MMASKSPSLNSLMNYRFVKKQVPKLTSGSESLFSSDTNGGIQHDSKGTDGQTDSQTSNCS
SATILYSDQEGGSQNSEMTIPYNPSQDLGSQDPFTQNTEDCQPSSPDSPIFRGKVKGSNK
NCIGDDDTDPMSSPWFSKEYGMSNGMASTSTKQRRKSKQVVRQGFGDDLTPEQTEAVNHL
KSMFPDRPMEVLQEALEARSWNVEEAVDHVIDGSKAFRNKKPKKRIIHQESSDSEDGGSP
VHRPGKRARPIESCDLDPSQISEKEKERRIIFLQEAFPQKKRRDLHQALENNNWQTDDAL
LELGNIGDKSEERQAALEDEEEDFRSEDEEADSDDSIEMDTEGAKTEREKILTFFDEATI
DELSATPGCSKKRAEVIMSLRPFKTWNKLTTEFCNNKALSYEIVSGCKEIFRVRQVILKL
MQKCEGISKKMETVVSCLTKKTDIDESSDDESIQITKQPGNLSPNCRLKPFQMVGLNWLR
IMHSQHLNGILADEMGLGKTIQTISFIAHLMEEGERGPHVVIVPSSTIENWMREFETWCP
DVNLLVYYGSIEDRRQSRLSLMYDTKEEYNVVLTTYNMATGSVEDRALFKKVEFHYAIFD
EGHMLKNMSSLRYQNLMKIAAERRLLLTGTPLQNNLLELMSLLCFVMPEIFSGKTDQLKQ
MFSMINRGTDDKAKSRYERERIQQAKRIMRPFVLRRLKSEVQQQLPQKRDRVLYCDLIPQ
QRALYHRLIQQFKQVMKEDRVKQSNDGASMLMQLRKASNHPLLLRNHYTDDIVRKMAKQL
TKEPSHRERGALTEFIYEDMAMLNDYDIMKLCDQYKKYLGSYKLDNDVITESGKFQELEK
LMQSHKSQGDRILLFSQFTMMMDIMEDFLKMKKYSYLRLDGSTPVPDRQELIDKYTKDES
IFIFMLSTRAGGLGINLTAANVVIIHDIDFNPYNDKQAEDRCHRVGQTREVSVIRLISKD
TVEEGMLRCARDKLKLEKDITTDESSDKESSSDVASLLKDALSVSS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagcaaaagtccaagcttaaactcactgatgaattatcgttttgtgaaaaag
caagttcctaaactcacctcaggtagtgagagcttgtttagctccgatacaaatggaggt
attcagcatgacagtaagggaacagacgggcaaacagacagccaaacaagcaactgttca
tctgccacaatcctctactcagatcaggagggaggaagtcagaacagcgagatgaccatt
ccatacaacccgagtcaggatctcggaagccaggatccattcacacaaaacacagaggac
tgtcagcctagtagtccggactctcctatcttccgcggaaaggtcaaggggtcaaacaag
aactgtattggggacgatgacacagatcctatgtcctccccctggttttcaaaggaatat
ggcatgtccaatggaatggcttctacctcaacaaaacagaggaggaaatccaagcaggtt
gtgcgacagggctttggggatgacttgactccggagcagacggaagctgtcaatcacctg
aagtcgatgtttccggaccgccccatggaggtgttacaggaagctttggaggcccgcagt
tggaatgtggaggaggctgttgatcatgtgatcgatgggtctaaggcattcagaaataag
aaaccgaagaagcggataattcatcaggaaagcagcgattcagaagacggagggtcaccg
gttcatcgtcctgggaaacgagctcgacccatcgaatcttgtgaccttgacccttcccag
atctcggaaaaggagaaggagaggcggattattttcctgcaagaggcatttcctcagaag
aaaagacgggacttacatcaggccttagagaataacaactggcagactgacgacgccctt
ctggagctgggcaacataggagacaagtcagaggagagacaagcggctctagaggatgag
gaggaggatttccgaagtgaagatgaagaggcagacagcgatgacagcattgagatggac
acagaaggtgctaagacagagagagagaagatcctgactttcttcgatgaggcgacaata
gacgaactatcagcaacacctggctgttccaaaaagcgtgctgaggtcatcatgtcacta
aggccgtttaagacatggaacaaactaacgacagaattttgcaacaacaaagcgttgtcg
tatgaaattgtcagtggttgtaaagaaatcttccgggtccgacaagtcattctcaaactc
atgcagaaatgtgagggaatttcaaagaaaatggagaccgttgtttcgtgcctgacaaag
aaaacggacatagatgaaagcagcgatgatgaatctatacaaataactaaacagccagga
aacttgtctccgaactgtcgtttgaagccgttccaaatggtggggttgaactggttgaga
atcatgcactcgcagcacctgaatgggatcttagctgatgaaatgggattgggcaagacg
atacagacgatctcctttattgctcatctgatggaggaaggggagaggggacctcatgtc
gtcattgttccttcctctacaatagagaattggatgcgagagtttgagacctggtgtccg
gacgtcaaccttctggtttattatggatcaatagaggaccggcgtcagagtcgactgtcg
ctgatgtatgacaccaaggaggaatacaacgttgtcctcaccacatacaacatggccacg
ggaagtgtagaagaccgagcactttttaagaaagtcgagtttcactacgccatctttgat
gagggtcacatgttaaaaaacatgtcgtcacttcgctaccaaaatcttatgaaaattgca
gcggagcggcgtttgctgttgactggcactccccttcaaaacaacctcttggagcttatg
tcgctgttgtgttttgtgatgccagaaattttcagtgggaaaactgatcaactcaagcag
atgttctccatgatcaataggggaactgatgataaagcaaaaagtagatatgaaagggag
agaattcagcaggctaagagaataatgcgaccatttgtcctacggaggctgaagtcggag
gttcagcagcagcttccacagaagcgagacagagtcctatactgtgacttgattccccag
cagagggcgctttaccaccgactgatccagcaatttaagcaggtcatgaaggaggacagg
gttaaacagtcaaatgatggggcgtccatgttgatgcagctccggaaggcgtccaaccac
ccgctgttactgagaaatcattacaccgacgacattgtgagaaagatggcaaaacaactc
accaaggaaccatcacaccgagagcggggggctctgacagagtttatctacgaggacatg
gcgatgttaaacgactatgacatcatgaaactgtgtgaccaatacaagaaatatttaggg
agttacaaactagataatgatgtcatcacagagtcagggaaattccaagaactggaaaaa
ctcatgcagtctcataaatctcagggagaccggattctactcttcagtcagtttacaatg
atgatggatatcatggaggacttcctgaagatgaagaaatactcgtacctacgtctggac
ggctccacgccagtccctgacagacaagagttgatcgacaagtacacaaaagacgaaagt
atatttatcttcatgctgtccacacgagctggcggtttgggaatcaacctcacagcggct
aatgtcgtcattatccatgacatagacttcaacccgtacaacgataaacaggctgaagac
aggtgtcatagagtagggcaaaccagggaggtttcagtgattcgtttgatcagtaaggac
acggtagaggaaggaatgctgaggtgtgctcgggacaaactcaaactcgagaaagatatc
actacagatgaaagctcggacaaagaaagctcctctgatgttgcctcactcctcaaagat
gctctctctgtcagctcttga
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