Ostrea edulis (European flat oyster): 125675242
Help
Entry
125675242 CDS
T09123
Name
(RefSeq) synaptonemal complex protein 1-like
Organism
oed
Ostrea edulis (European flat oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCP-1
Crescentin
SHE3
TMF_DNA_bd
PspA_IM30
ATG16
DUF4200
Motif
Other DBs
NCBI-GeneID:
125675242
NCBI-ProteinID:
XP_056013711
LinkDB
All DBs
Position
3:complement(20903865..20961871)
Genome browser
AA seq
1158 aa
AA seq
DB search
MQQMRETQQPFFKPLSFGEQNQSAKKCFEPSQVQVRPKFQQNSNQYQINKVKENEHTASQ
HQEQTQGSERISSLHVKLQQEADRIRKWKIQTEIEIKQKDKKIKEATHTIESLRKSMLEL
QLQNESLSLRLQEEISGREDILHRIHATREMCNLLKDHSAATEERLQQCETERTELKYLE
KQHVKQFEELSEKFNTLDITSKKEKEELTEKWTEEWNKGEKLQKELKNHKEEMKRTLNEL
EQQCEEKDVEIRDVRTELCKNEDQIHKMKTVIDDLQSEIQEFQSELQQKQQCLTESGERL
TKIMDDYGKLEDRLLEANKSLEESQNCRLLLQKEFETNRSSCTEEINNLRSHLGNLTCTL
DNEKSRVSELEMAIQKLEHTIEDLKSTKDILMMEKTEVESQVIKLQGEKTASHQERERLL
SEKTSLEVQVGELSLDLAKYQGENSDHKTELQSLNNNLEMLQDENKRIKEELDDLNKEVL
SRESKFQEIKKSFAEKMVVCTEQSEELEKVSEKLKDERKLNEHLQINIKEDEEQLAKLNT
AIEDYKAEIKQLLQEIKVKSKKEDSSQKQIEKLKAIEKEYEEKLQHAEKELETALQENEM
LKSEKEEQDQNYNGELKSMTKETDKLELKLKNLKDDLSNKNKHSKELEKEIKSLKSKLTS
QTKATETKDRDLRELLEEKEKCQKEIQELQSVCEELRASMEKEKLLSEKSKKETQDVKKQ
FDDMVKKKEGTEKKCEHEIQELMATMEKFHQTNANVVEDKDREIERLKTDISRNMDKSKS
ESDAQILELRNEIEEVQNLLGNSNKNMISLRKENEDLYCKVKEFEVSIEERDAQISQLQA
AINMLKKDVESHQGEKNEVETENKEYKEKIRRFQNDLNDKESEIQELMTKIKDMKVEKRE
HNTTLKLKKKSNLQSEMESTPSTPKAHSMSNRDIAQSKTNNNARMTPKIPPLSKENQCTK
PKFSPNLNKETVGKRPSPNATTPMASVLKTPQRSILKTESGNSVIKKRRVVFASDDEDEN
GSDSSEEMMELEINEVESRLKSVTPKRTPLLLKPSPKVKTPDRALYYGSDGEEEYCTPRT
PNRLQLNRVPRAPAPLKQVTPLEKSQNIRKAPSRPQGKFFLTSPKERLKNQKSNSKLAKL
KRTEDSWFELDSVFGFED
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagatgagggaaacgcaacaaccattttttaaaccactttctttcggtgaacaa
aatcaaagtgcaaaaaaatgttttgagccatctcaagtgcaagtacgcccaaagtttcag
caaaattccaaccaatatcagattaataaagtgaaagagaatgaacatacagcatcacaa
caccaagaacagactcaaggcagtgagagaatttcctctttacatgtcaaattacagcag
gaggctgatcgtatcagaaaatggaaaattcaaacagaaatagagatcaagcaaaaggac
aagaaaataaaagaagcaactcacaccattgaaagcttgagaaaatcaatgcttgagctt
cagcttcaaaatgaaagccttagtctgcgtcttcaggaggaaattagtggcagagaggat
attcttcacagaatacatgctacaagggaaatgtgtaatcttctcaaagatcactctgct
gctacagaggaaagactgcaacaatgtgaaactgaacggactgagctgaaatacctagaa
aagcaacatgtaaagcagtttgaggaattatctgagaagtttaatactttggatatcaca
tcaaagaaagaaaaggaagagttgacagagaaatggacagaggaatggaataaaggagaa
aaactgcaaaaagagctgaaaaatcacaaagaggaaatgaagagaacattgaatgaattg
gagcaacaatgtgaggagaaagatgttgagattcgggatgtcaggactgaactttgcaag
aatgaggaccaaatacacaaaatgaaaactgttatagatgaccttcagagtgaaattcag
gagttccagagtgaattgcagcagaaacaacaatgtctgacagaatctggagaaagacta
accaaaataatggatgattatgggaaattggaggatagacttttagaggctaacaagtca
ctagaggaaagtcagaattgtcgtttattactccagaaagagtttgaaacaaacagatct
tcatgtactgaagaaataaataatctcaggtctcaccttggaaaccttacctgcacattg
gacaatgagaagtcaagggtgtctgagctcgaaatggctattcagaaacttgaacataca
attgaagatttgaaaagcacaaaagatattttgatgatggagaaaacggaggtggagagt
caagtaataaaacttcaaggagaaaagactgccagtcatcaagagagggaaagacttcta
tcggagaaaacatcactagaagttcaagtaggagaattaagtttggacctggcaaaatat
cagggggaaaactctgaccacaagactgaattgcagagcctcaacaataacttggaaatg
ttgcaggatgaaaacaagagaatcaaggaagaactagatgatttaaataaagaagtgctt
tcaagagaatcaaaatttcaagaaataaagaaatcatttgctgagaaaatggttgtgtgc
acagaacagtctgaagaactagaaaaggtttctgaaaagctgaaagatgaaaggaagtta
aatgaacatttacaaattaacattaaagaagatgaagagcagttagcaaagctaaacact
gcaattgaagactacaaagctgagataaagcaattgctacaggaaatcaaggtcaagtca
aagaaggaagatagctcacagaaacagatagagaaattaaaagcaattgagaaagagtat
gaagagaaacttcagcatgctgaaaaagaactggaaacagcactgcaagaaaatgaaatg
ttaaaatcagagaaggaagagcaggatcagaattacaatggagaattaaagagtatgaca
aaggagacagacaagctggaattgaaattgaaaaatttaaaagatgatctctctaataag
aataaacattcaaaggaattggaaaaggagatcaaaagtctcaaatccaagttaacttca
caaacaaaagcgactgagaccaaggacagagacctccgagaactgttggaggagaaggaa
aaatgtcagaaagaaatacaggaattacagtcagtgtgtgaggaattgagggctagtatg
gaaaaggagaaacttttgtctgaaaaatcaaagaaggagactcaggacgtgaagaaacag
ttcgatgatatggtcaagaaaaaggagggaacggagaaaaagtgcgaacatgaaatacaa
gaactcatggcaaccatggagaaatttcatcaaacaaatgccaatgttgtggaagacaag
gacagggaaatagagagactaaagacagatattagcagaaatatggataaatcaaaatcg
gagagtgatgcccaaatactggagctccgaaatgagatagaggaagtccaaaatctcctg
ggtaattcaaacaagaatatgatatctttacgaaaggaaaatgaagatttatactgtaaa
gttaaagagtttgaagttagcattgaagagagagatgcacaaatctcccaattacaggct
gcgataaacatgttgaagaaagatgtggaatcacatcaaggagagaaaaatgaagtggaa
acagaaaacaaagaatataaagagaaaatccgcagatttcagaatgacttaaatgataag
gaatcagaaattcaagaactcatgacaaagataaaagacatgaaagttgaaaaaagggag
cacaatacaactttgaaactgaagaaaaagtcgaatttacaatctgaaatggagagtacc
ccatcaacaccaaaggcacatagtatgtccaacagagatatagcccaaagtaaaaccaac
aacaatgcacggatgacacccaagatccctccactgagtaaagagaatcagtgcactaaa
ccaaagttttctccaaatctaaacaaagaaactgttggcaaaagaccaagtcccaatgca
accactcctatggcatctgtactgaaaactcctcaacgaagtattttgaaaacagaaagt
ggaaattcagttatcaaaaagagaagagtggtttttgcttcagatgatgaagatgagaat
ggatctgattcctcagaggaaatgatggaactggagataaacgaagtagagagtaggctg
aaatctgtcacaccaaagagaactccattgctgctgaaaccttccccaaaagtaaaaaca
ccagatagggctctgtactatggcagtgatggcgaggaagaatactgcaccccaagaact
ccaaacaggctgcagttaaatcgtgtaccgagagctcccgcccctctaaaacaagtgact
cctttagaaaagtctcagaacatacggaaggcgccttctagacctcaaggaaaattcttc
ctaacttctccaaaggaaagactgaagaatcagaagagtaattcaaaactggccaagtta
aagaggacagaggattcttggtttgaactggattcagtgtttggatttgaagattaa
DBGET
integrated database retrieval system
