Ostrea edulis (European flat oyster): 125676423
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Entry
125676423 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase rnf213-beta-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125676423
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125676423
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125676423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_22
AAA_5
AAA
DZR
YtzJ
MCM
AAA_7
Motif
Other DBs
NCBI-GeneID:
125676423
NCBI-ProteinID:
XP_056016918
LinkDB
All DBs
Position
3:complement(54760151..55117643)
Genome browser
AA seq
2745 aa
AA seq
DB search
MEHVKCPNFDPEKDAICEEEISRDQQYCEECGWEIDKKIFDPGSRMCNSVKDGVRCQNII
KKRFCSNCGSRSTTQSEKSVKESKMTSNGAQHFPNTRSEDKETLKVEIDQQRKESPTVGA
NKEEVVEEAENDKKGRERKESDEIEEMIETSGEETNVLGETEREKERTDSSSSGSEHDVY
VPRFLATAMNNDGKVKKEQEVPKPVKEKETQNANIFEEENSENLDKRSEDVEQEEFKNIL
RQDQEITDSTQGSTEIPEVDNSSTAVTIEDEMESNDNVVRDSMKLRNISTEIEADQDKSG
TGVCTTDSAKDSEYKISPSRVQSKKTRSRKNTQNLSSKVDVTFHAIAPTSYWKKKDRKNT
CVFMEYKYKPESTWKALTTEVIGDTDVGSLLIVKIRFERSDEIQYRYFTETKNGDKEDEF
VYNYYQTVADRKLNLGKCGDTFSVYDGVLRRKPTVWESVSHVIRSYERELEKDLSTSAKY
LFPKWKRFSNQGKQYTGSEMLEEVDMLYRGLSSTYFQTCEQWKKDENKFRKYVGKTLKEV
LRPKIQDIVSGSCDLISAAGILAICTSYTITLSDEEKIGLLRSLELKVDMEERKSTNLEE
IFYEYEDDTKSVGQAIHQTLSNLKTYTDPRWLCCLPLCRIFSKQIKSFSDLPKDVNHNAK
TPTWWGLNDGFLNDLVQRMKERFKWTMSPIALFELLEPMFPIDYLLPRTFVAMLNFSQLQ
DIVERIELPPEVILAALYYHLKSNKGILNTKHNAIGNCLMRAKESLRRSQPSMEECDDSL
TRAFLTFTIAADLVKYLHSIQRVHIHADVIDGTISVFVVAVATYNALTNKKGDVAYNENR
HFIVFEECKIILYNWMFHNSPMSDKKEMEKTLDFWDKMLSMDIPETPVKGIFVGDMGENL
EKMLKQEGVNKEILINVYCEKSEEFHGVVQDVLGKTAFQILQKGHFCENQIVTGGGAATY
GKMLTRLFEQKWQEGNLSKSPSAILNFTLSWSPFIHFLDMFYNNKNAVVLSPKCQTNFDK
AVTLFKTTLKELLNGNISIRTLKEILKAKDKIISINRVLSTRGSPTDPKDIHKCFEMREK
EIVRIQEIREDMQLIAQMIGYVGVETTELQSQLSKMVKCEDGKIADLCDLPHEEYPPDIG
QYVPIVIGEDLIQNLSDIIPLIKQLSTNAVFRQIWTNTGLRELRDNQTTVSDSSVFKKIW
KKAYTEWKNICASFTNGTVKYFTFERLWKESNCGDIQSFLSLMSKNTDEIWINQRIKQYR
DLELMTQCSKAANIILKIVEEFYLKGDFTPIQSLSETVHIGDIALNSIDQSKLEVCKILH
GITEEKVECLQAFIESKPLIEWLNKNLKEDEMKVFVDLATIAAGEGDIEVAKVKCLQSAT
AGYGPLIFIMTRPCNYDVFLKKCNQVWDECQTDKALHRKLRDTCNQLDWLENVKSATGSV
EVTSMKLAENINKHGFYIIGGSKAHSSKSTLTFEDALKLHVEIKRKEKVENRTYNFQELQ
ELQGKLMLVAGKAEMQTDEIERFIMILDSAVRLSHVYIKLVTAGCALFSDWQARFLCDTD
RKVCAFIQFGHGKNCLEFKGRRNDEEDVSTVIPRLANFMEKCLESWLEYIDKTRDVYEQL
NHFTVDQMVILQRELSLIGDKVGPSNMAYSLLSCIMEDCSKKDLEDAIQSAKADVKELKA
EETDIDDSDNSPEKRFIEKIVSLKYDRKLAVAALDSGIDPNNIEAGIMYCVENEMAKPDE
EKRDLGFGNDTVSTAAMPRHIFASLQCSNEESAFTPLIDELENIWGGFLTTAASGLKDYL
SVEQLGLVLRRLAEKNTTEIKRHFYKILKSGNPNLLVCPKDEVFETVLSIYGYQDECPLP
QSDEVLLCTKYTSIDEVEIFWRRSLYSTSSKVYCLVHPDALGYDVSEKSERRLDYHLKRA
IEKDTKFQLVIVTSEEKEIHTSLSVALEKYKCPPMPSMGREKLKRYLIGKLTGKSAKPNI
MPASCVDFDQSSVRVVKSYRAGVGKTLYKRRLSDKLRRDYKELKREKQDVISIPIHKGEI
NVNHIVSKLREQTLPPKCIEPRIIHIDLSHEVQKGIDYLLFQLLVLGKLTDEFGCVWRKK
EFDFYLIETLPASDESRQKDQCMLEILPDVVCRSPIESLEKLNTGNPGIGDRDLLFDQQE
FQSPVFQRPYQYLSRVDKGKSLTDVNVEKVEGNLQSCLELLLRHCGIKDPSWAELKQFVG
FLNTQFQDFENSAFTGEGAADVLPGFASFVARFLIQMSRDFATRSLNISELSSVHEQNED
QHVAILSQFQMKRTWESSPHPYLFFNPDHNSMTFLGFQTDNNGNLLDQKTQNILEANILR
KDLQEALKRNEVNLNEDFDSLARDQKLLKLYNVMGVSMKENDVYDPDPSYELTTDNVKKI
MAIYMRFRSDIPVIVMGETGCGKTRLVKFMCSLQCPRGVEVQNMILMKVHGGTTCSDIIA
KVKDAEKVSLDNEQKYKDMLTVLFFDEANTTEAIGLLKEIMCDGSMDGEAVNFRKTLKLI
AACNPYRIHSEELIKALEQAGLGYHVDAEKTTDRMDHIPMRRLVYRVQPLPQSLLPLVWD
FGQLDSDVEELYIRQMVIRYINDGKLPKDVEELPNILSRILNAAQQFMRKQKNECSFVSL
RDVERVLDVAHWFYKQGGTRDGFLCRMNKMCEESENGADDFAEIKNKDDQEDISDLTKSI
ILALGVCYHACLKEREAFRDDVSKAFGGACKLPGGSQKIFDTIQR
NT seq
8238 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtaaaatgtccaaactttgaccctgagaaggatgctatttgcgaagaggag
atctcccgagaccaacaatattgtgaagaatgtggatgggaaatagacaagaaaattttt
gatcctggatcgcgaatgtgcaattcagtaaaagatggagtgcgatgtcagaatatcatt
aaaaaacgtttttgcagcaactgcggatccaggtcaacaactcagagtgaaaagtcagtg
aaagaaagcaaaatgacatccaatggggcacaacactttccaaacacaagaagtgaagat
aaagaaacgttaaaagtggaaatagatcagcaaagaaaagaaagtccaactgttggtgca
aataaagaagaggttgtcgaggaggcagaaaatgacaagaaaggaagagagagaaaggaa
tcggatgaaatagaggaaatgattgaaacatcaggcgaggaaacgaatgtactaggagag
actgaaagagaaaaagaaagaacagattcaagtagctctggtagtgaacatgatgtttac
gtaccacgttttctggctactgcaatgaacaatgatggcaaagtaaaaaaggaacaggaa
gtaccaaaaccagttaaggagaaggaaacccaaaatgctaatatttttgaagaagaaaat
tcggaaaatttggataaaagatccgaagatgtagaacaagaggaatttaaaaacatatta
agacaagatcaggaaatcactgacagcacacagggtagtacagaaatcccagaggttgat
aacagcagtacagctgtaaccatagaagatgaaatggaatctaatgataatgttgtacga
gactctatgaaattacgaaatatttcaactgagatagaggctgatcaagataaatctggt
actggcgtatgtacaacagattccgctaaggattctgaatataagatatcgccatcaaga
gtgcagtcgaagaaaactagatcaagaaagaacacgcaaaacttgtcttcaaaagtcgac
gtgacgtttcacgcaattgctccaacgtcatattggaagaaaaaggatcgaaagaacact
tgtgtttttatggaatacaagtacaaaccagagtcaacatggaaagcattgacgacagaa
gttattggggacaccgatgtaggttcattgttaatagtcaaaataagatttgagagatcg
gatgaaatacaatacagatattttactgaaacaaaaaatggagacaaagaggatgaattt
gtttacaactactaccagactgtggcagatcgaaagttgaatttgggaaaatgcggagac
acattcagtgtatacgatggtgtactaagacgaaaacctacagtttgggaatcagtgagc
catgtgatacggtcctatgaaagagaactggaaaaagatctttcgacttcagcaaaatat
ttatttccaaaatggaagcggttttcaaatcaaggaaaacaatatactggttctgaaatg
ttggaggaggtagatatgctgtaccgtggactcagttctacatactttcaaacctgtgag
cagtggaaaaaagatgaaaataaatttcggaaatatgttggaaagacattaaaggaagta
ttgagaccaaagatccaagatattgtatcggggagctgtgatttgatcagcgcagctggg
attcttgcaatctgcacttcttatactattaccttgtcggatgaagagaaaattggtttg
ctcaggagtctggaattgaaagttgatatggaagaaaggaaatcaacaaatctagaagaa
atattctatgaatatgaagacgacaccaaatctgttggacaggcgatacaccagacacta
tcgaatttgaagacttatacagatccacgatggttatgctgtcttcctttgtgcagaata
ttttcgaaacaaatcaaaagtttctcagatctaccaaaggacgttaatcacaacgctaaa
acaccaacttggtggggattaaatgacggtttccttaatgatctggtgcagagaatgaaa
gaaagattcaaatggactatgagccctatagcactatttgaattgctggaaccaatgttt
cccattgattacttactaccaaggacgtttgttgccatgttgaacttctcacaacttcaa
gatatagtggaaagaatagagctacctccagaagttattttagcagcactgtactaccac
ttgaaatcaaacaaaggcatacttaacacaaagcacaatgccattggaaactgtctcatg
agagcaaaagaaagtttaagaagatctcagcctagcatggaagagtgtgatgactcgttg
accagagcatttcttacattcacaattgcggcagacctcgtgaaatatcttcattctatt
cagagggtgcatattcatgcagatgtaattgatggaactatcagcgttttcgtggttgca
gtagcaacttataatgctctcactaacaaaaagggtgacgttgcatacaacgaaaatcga
catttcatcgtttttgaagaatgcaagataatactttataattggatgtttcacaactct
ccaatgtcggacaaaaaggagatggagaagactttggatttttgggacaaaatgctttct
atggacatcccggaaacaccagtaaagggaatttttgttggtgacatgggagaaaatctt
gaaaagatgttgaaacaggaaggcgtgaataaagaaattcttataaatgtgtattgtgaa
aaatctgaagaatttcacggggttgtacaggatgtgttggggaaaactgcattccagatt
ctccaaaaaggacatttttgtgaaaatcaaattgtgactggaggtggagctgcaacatac
ggaaaaatgcttactagactttttgagcagaagtggcaggaaggaaatttgtccaaatca
ccatcggccattctgaattttaccttgtcatggtcaccattcattcactttctggatatg
ttttacaacaacaaaaatgctgtagtgttgagtcccaaatgtcaaaccaactttgataag
gcggtcactcttttcaaaactacattgaaggaacttttgaatggaaatatatcaattaga
acgctcaaagaaattctgaaagccaaagataaaataataagtatcaatagagtacttagt
actcgaggttccccaaccgaccccaaggatattcacaaatgttttgaaatgagagaaaaa
gaaattgtgcgcatacaggaaatacgagaggatatgcaattaatcgcacaaatgattggt
tatgtaggagttgaaaccacagaattgcaatcccaattatcaaagatggttaaatgtgag
gacggaaagatcgcagatctgtgtgatttaccacacgaggaatatccacctgatataggt
caatacgttcccattgtaattggagaagaccttatccaaaacctgtcagacatcattccg
ctcataaagcaattgtcaacaaatgcagtttttcgtcaaatctggaccaacactgggctc
agagaattaagagacaatcagacaaccgtatcggattcctctgttttcaagaaaatttgg
aagaaagcttatactgaatggaaaaacatttgtgcttcgtttacgaacggaactgtcaaa
tatttcacctttgaaagactttggaaagaatcaaattgtggagacatacaaagtttttta
tctctgatgtcgaaaaacacagatgaaatttggataaatcagcgaataaaacagtatcga
gacttggaattgatgacgcagtgctcaaaagcagcgaatatcattttgaaaatcgtggaa
gagttctacttaaaaggagactttactcccattcaaagtttaagtgaaacggtacatatt
ggagatattgccctaaattcaatcgaccaatcaaagctggaggtgtgtaaaattttacat
gggataacagaggaaaaggttgaatgtctccaagcatttattgagagcaaaccgttgatc
gaatggctaaacaaaaacttgaaagaggacgagatgaaagtcttcgttgatcttgccact
attgcagctggtgagggtgatatagaggttgcgaaggtgaaatgtctgcagtctgcaaca
gcgggctatggtcctcttattttcattatgacgagaccatgcaactacgatgtattcctt
aaaaaatgcaatcaagtatgggatgaatgccagaccgacaaggcgctacatcggaaattg
agagatacctgcaatcaattggattggcttgaaaacgtgaagtcggcaaccggatctgtt
gaagtgacttcaatgaagttggccgaaaatataaacaaacacgggttttatattattggt
ggatcgaaagctcattcctccaagtcgacactgactttcgaggatgctttgaaacttcac
gttgaaatcaaaagaaaagaaaaggtagagaacagaacgtataatttccaggaattacag
gaactacaaggcaagcttatgctagttgctgggaaagcagagatgcaaacagatgaaatc
gaacgttttattatgattttggattcagcagtgcgtttaagccatgtatacataaagtta
gttacagctggatgtgcgctgttctcagactggcaggcaagatttttgtgcgacacagat
aggaaagtatgtgctttcattcaatttggccacggaaagaactgcctagagtttaaaggg
agaagaaacgacgaagaggatgttagcacggtcattcctcgtttagctaacttcatggaa
aagtgccttgaaagctggctggaatacatagacaaaacaagagatgtctatgaacagttg
aatcactttacagtcgaccagatggtcatactacaaagagaattatccctcattggagat
aaagtagggccttctaacatggcttactctcttttgtcatgtataatggaagactgttcg
aagaaagatttagaggatgcaattcaaagtgctaaagcagatgttaaagaactcaaggct
gaggagacagatattgatgattcagacaattcccccgaaaagagattcattgagaagata
gtgtctttgaaatatgatagaaaactagctgtcgctgctttagattctggaatagatccc
aacaatattgaagcaggaattatgtactgtgttgaaaatgaaatggcaaaaccagatgaa
gaaaagagggatttgggctttggaaacgatacagtgtctactgcagcaatgccacgacac
atttttgcatcactgcagtgcagcaatgaggaatctgcattcacaccacttattgatgaa
ttggagaacatatggggagggtttttaacaacggcagcatccggtttgaaagactaccta
agtgttgaacaacttggcctagttcttcggagactggcggaaaaaaataccactgaaata
aagagacatttttacaagatcctgaagagtggaaacccaaatttgctggtttgcccaaaa
gatgaagttttcgagacagttctgtctatatatggctatcaagacgaatgtccactaccc
cagtccgatgaagttctgttgtgtacaaaatacacatcaatagacgaggttgaaatattt
tggagacggtctttgtacagtacatcttctaaggtatattgccttgtccaccctgatgca
ttgggatatgacgtcagcgaaaaaagtgaacgtcgattggattatcacctaaagcgagcg
atcgaaaaagataccaaatttcagttagtgatcgtgactagtgaggaaaaagaaattcac
acaagtttgtcggttgcactggagaaatataagtgccctccaatgccatctatggggaga
gagaagttaaaacgataccttattggcaaactcactggaaaatcagcaaaacccaacata
atgccagcatcctgtgtggattttgatcagtcaagcgtccgtgtcgtaaaatcgtaccgc
gctggtgtaggtaaaacactgtacaaaaggagattatcagataaactgaggagagattac
aaggaattgaaaagagaaaaacaagatgtaatatcaatacctattcacaagggggaaata
aacgtgaaccatatagtttcaaaactacgagaacagactttgccaccaaaatgtattgag
cctcgaatcattcatattgacctttcacatgaggttcaaaaagggattgactacttgctg
tttcagttactggttctcggaaaattgactgacgaatttggttgcgtctggagaaagaaa
gaattcgatttctatcttatagagactctcccagccagcgatgaaagtaggcagaaggat
cagtgcatgcttgaaattttgccagatgtggtttgcaggtctccaatagaaagtttagaa
aaattaaatacaggaaatccaggcattggagatcgtgatcttcttttcgatcaacaagag
tttcaaagtccagtgtttcagcgaccgtatcagtatcttagccgtgttgacaaaggaaaa
tcgttgacggatgttaatgttgaaaaagtggaaggaaatttacagtcatgtttagaattg
cttttgaggcattgtggaattaaagacccatcatgggcagaactaaagcaattcgttggc
tttctgaacacacagtttcaagattttgaaaactctgctttcactggggaaggagcagct
gatgtgcttccaggatttgcaagttttgtcgcacgatttctaatacagatgtctagagat
tttgcaacaagatccctgaatatcagcgaattgtcttccgttcatgagcaaaatgaagat
cagcatgttgctattctttcccaatttcaaatgaaaagaacttgggagagcagtccgcat
ccatacctattcttcaatccggatcataactccatgacttttcttggattccaaacagac
aacaatggaaatttattagatcagaaaactcagaacattcttgaggcaaacatattgcga
aaggatctgcaagaagccctgaaaagaaatgaagttaacttgaacgaggactttgattca
ctcgcaagggaccaaaagttgttaaagctgtacaatgtgatgggagtttctatgaaggaa
aacgatgtctatgatccagatccgtcatacgaactcaccacagacaatgttaaaaagatc
atggcaatatatatgcgttttcggagcgatatacctgttattgtcatgggagaaacaggt
tgcggtaaaacaagacttgtaaagtttatgtgctctctacaatgccctcgaggagttgaa
gtacaaaatatgattcttatgaaggttcatggaggaacaacttgttcagatatcatagcc
aaggtgaaagatgctgagaaggtcagcttggacaatgaacaaaaatacaaagatatgcta
acagttctcttctttgatgaagcaaatactaccgaagcaataggattgctcaaagaaatc
atgtgtgatggttcaatggatggagaggctgtcaatttcaggaaaacattaaaacttatt
gcggcttgcaatccataccgaatacattctgaagaactcattaaagcactagaacaagca
gggcttgggtaccatgtggatgctgagaaaacgacagatcgaatggaccatataccaatg
cgaagattagtctatcgtgttcagcccttaccacagagcttgcttccacttgtatgggat
tttggacagttagattctgacgtggaagaattatacattcggcaaatggtcatcagatat
atcaacgatggaaaattaccaaaggacgttgaagaacttccaaatattctcagtcgaata
cttaatgcagcacaacaattcatgagaaagcagaagaatgaatgtagttttgtcagccta
agagatgttgaaagagttttggatgtcgcgcattggttttacaagcaaggaggcaccagg
gacgggttcctttgtcgaatgaacaaaatgtgtgaggaaagtgaaaatggggctgatgat
tttgcagaaatcaaaaacaaggatgatcaagaggatatttctgacctaaccaaatccatt
attttggctcttggagtgtgttatcatgcctgtctgaaggaaagagaagcctttagagat
gacgtcagtaaagcatttggaggagcgtgtaaacttccaggagggtctcaaaaaatattt
gacactattcaaaggtaa
DBGET
integrated database retrieval system
