KEGG   Ostrea edulis (European flat oyster): 125676859
Entry
125676859         CDS       T09123                                 
Name
(RefSeq) coatomer subunit beta'-like isoform X2
  KO
K17302  coatomer subunit beta'
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oed04131]
    125676859
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oed04147]
    125676859
Membrane trafficking [BR:oed04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    125676859
Exosome [BR:oed04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   125676859
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Clathrin WD40_2
Other DBs
NCBI-GeneID: 125676859
NCBI-ProteinID: XP_048770689
LinkDB
Position
1:complement(86231562..86255686)
AA seq 950 aa
MPLRLDIKRKLSARSDRVKCVDLHPTEPWMLASLYNGNVHVWNHESQQLIKSFEVCDLPV
RSSRFVPRKNWVITGSDDMQIRVFNYNTLERVNQFEAHSDYIRSLAVHPTQPFILSSSDD
MLIKLWDWEKKWTCTQVFEGHSHYVMQIVINPKDNNTFASASLDRTVKVWQLGSNTPNFT
LEGHEKGVNCVDYYSGGDKPYLISGADDRLIKIWDYQNKTCVQTLEGHAQNISAVAFHPE
LPIIMTGSEDGTVRIWHANTYRLESTLNYGLERVWTIAAQKGSNNVALGYDEGSIIIKLG
REEPAMSMDSSGKIIWAKHSEVQQANIKAIGDQDVKDGERLPLAVKDMGSCEIYPQTIAH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWSSDSSVYAIRESTSSVKIFKNFKE
QRAFKPEFGAEGIYGGYMLGTRSVSGLAFYDWESTELVRRIEITPKNVYWSENGELCCIT
TDESFFVLKYNAEAVEKARENREDVGEDGIEEAFDVVGEIEETVKTGVWVGDCFIYTNSV
NRLNYYVGGEIVTIAHLDRLMYLLGYIPKDNRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFETADKILPMIPREHRSRVAHFLEKQGFKSQALAVTCDPEHKFELALQLGDLKTCYQI
AKEAESEQKWKQLAELAISKCEFGLAQECLHQANDFGGLLLLASSAGNAQMVAKLGDTAE
KAGQNNVAFISHFVLGRLEECLEVLINTGRLPEAAFFARTYLPSQVSRVVELWREHLGKV
NKKAANSLADPQEYENLFPDWKNALKTETFLKPQRQRAIPADKFLRVPPNHERTPVEEMK
QAEEQGSFTFVQDPQDGEEEFEQAPETTQQNVKVGHLSQAPETTQQNVKEPTPPQKSEAP
PPEPIPSKIEMDDLEKELELDLENMNIDNVDTSDPTEDQDINLDEDLLED
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgcctcttcgacttgatatcaagcgaaaactgtcggcacgatcagaccgtgtcaagtgt
gttgatttacaccctactgaaccatggatgttagctagtttatataatggaaatgtccat
gtatggaatcacgagtctcagcaactcatcaaatcctttgaggtgtgtgatttacctgtt
agaagttcccgatttgttcccaggaaaaattgggtcattactggctcggatgacatgcag
atccgagtgtttaactacaacacattggaacgagtcaatcaatttgaggctcactctgat
tacatcagaagcttagctgttcaccctactcagccattcatcctcagcagcagtgatgat
atgttgatcaagctttgggactgggagaagaagtggacctgtactcaggtgtttgagggc
cactctcactatgtgatgcagattgtgatcaaccccaaggacaacaacacctttgctagt
gcatctctggacagaactgtcaaggtctggcagcttggatccaacacacctaatttcaca
cttgagggacatgaaaagggagtgaactgtgtagactactattcaggaggagataaaccc
tacctgatctcaggagctgatgacagactgattaaaatctgggactaccagaacaagaca
tgtgttcagactttggaaggacatgcccagaacatttctgctgtggcattccaccctgag
ctccccataataatgactgggtcagaagatggcacagtaagaatctggcatgcgaataca
tacagactcgagagcacgctgaattacggacttgagagagtgtggaccattgcagctcag
aagggttccaacaatgtggcccttggatatgacgaaggaagcatcatcataaagcttggt
cgtgaggaaccagctatgtccatggacagcagtggaaagattatctgggccaaacactct
gaagtccagcaagctaacattaaagccattggggatcaagatgttaaagatggggagagg
cttcctctggctgtaaaggacatgggcagctgtgaaatctacccccaaaccatcgctcac
aatcccaacggaaggtttgtggtggtgtgtggagacggagaatacatcatatacactgcc
atggctcttaggaacaaaagttttggatctgcccaggaatttgtctggagcagcgattcc
tcagtgtatgccattcgggaatcaacaagctctgtcaaaatcttcaagaactttaaagaa
caaagagcatttaaaccagaatttggagctgaaggtatctatggaggttatatgttgggg
actcggtcagtgagtggcctggccttctatgactgggaatcaacagaactagtcaggcga
atagaaattacaccaaaaaatgtgtattggagtgagaatggtgagctgtgttgtatcacg
acagatgaatccttctttgttctgaaatacaatgctgaggcagtagaaaaagccagggaa
aatagggaagatgtgggagaggacggaatcgaggaagcctttgacgttgttggggaaatt
gaggaaaccgttaagacaggggtttgggtaggggactgcttcatctacaccaacagtgtt
aatcgtctcaactactatgtgggaggtgaaattgtcaccattgctcacctggacaggttg
atgtatttgctgggctacattccaaaggataatcgtttgtatctgggtgacaaggaactg
aacattgtcagtttctctctccttgtgtcagtgctggaataccaaacagctgtgatgagg
agggactttgaaacagctgataaaatattacccatgattcccagggaacacaggtcaagg
gttgcacatttcttagaaaaacagggattcaaatcccaagctttggcagtgacctgtgat
cctgaacacaagtttgagttggcattacagctgggagatctgaagacctgctaccaaatt
gccaaggaagcagagtcggaacaaaagtggaagcagttggctgagctagccatcagcaag
tgtgagtttggtctggcccaagagtgtctccaccaggctaatgactttgggggtcttctg
ctgctggccagttctgccggaaatgcccagatggtggccaagcttggggacaccgctgag
aaagctggccaaaacaatgtcgctttcatctcccacttcgttctgggaaggttggaggag
tgtctggaggtactgataaacacaggacgacttccagaagccgctttcttcgccagaact
tacctacctagtcaggtctcaagggttgtcgagttgtggagggaacacttaggaaaagtc
aacaaaaaagcagccaactcactggccgatccacaggagtatgagaatttgttcccagat
tggaagaatgcccttaagacagagactttcttgaaaccccagcggcaacgtgcaatccct
gcagacaaattccttcgtgtacctccaaaccatgagaggaccccagttgaggagatgaag
caggcagaggagcaggggtctttcacatttgtccaagatcctcaggatggagaggaggaa
tttgaacaagccccagagaccacacaacagaatgtcaaggtaggacacttgtcacaagcc
ccagagaccacacaacagaatgtcaaggaaccaacacctccacagaaatctgaggcccca
cccccagagccaatccctagtaaaatagaaatggatgaccttgagaaagaattagaactt
gatctagaaaatatgaacattgacaatgtagacacatcggaccctactgaggaccaggac
ataaatttggatgaagaccttttggaggattaa

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