Ostrea edulis (European flat oyster): 125677323
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Entry
125677323 CDS
T09123
Name
(RefSeq) nucleoporin Nup43-like isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125677323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125677323
03036 Chromosome and associated proteins [BR:
oed03036
]
125677323
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125677323
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125677323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_EIPR1
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
KNTC1_N
MIOS_WD40
PQQ_2
HCMVantigenic_N
Motif
Other DBs
NCBI-GeneID:
125677323
NCBI-ProteinID:
XP_056015541
LinkDB
All DBs
Position
3:complement(95448666..95466518)
Genome browser
AA seq
387 aa
AA seq
DB search
MCKSYETKMAECIHPFVKFVSRKVNKIRWQQSQKQALECADTFVTGSWDDEDNKICLWYL
GTQRSPQYDEGGGLEPTLKCEMTHSGDVTGLEFIEPDVIVASSSTGSVTMYKHHTASQTL
GIQYKWQSLHRHGNHSCPCTCLAVRDKTIVTSGEDGRLVILNAEQKSPHRIIENADSSTI
NNIVFLKHTEVITVNSSGQLKTFDLRSNSDAPSQTLSVSGELTSLHCVDKHPGQPHIVAT
GSHDGVLGIWDLRQEASPVSLLEAHNGPMWEVKFHKTNSNHLFTCSEDGAVWHWDASLVG
SSHMVQTQFTGTGAGSGGANFSLNPSFQFGGSENVNKWLCSDNKKMEINSLIDDNILPVN
SVDIESQTLICGTDSESLITIRLPTLR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaatcatacgaaacaaaaatggcggaatgcatacatccattcgtgaagtttgtt
tcacgaaaagtcaacaaaataaggtggcagcaaagtcagaagcaggcgttggaatgtgca
gacacttttgttaccggaagctgggatgatgaggacaacaaaatttgtttgtggtacctt
ggtacacagaggtctccacagtacgatgagggagggggtctggagcctacgctaaagtgc
gagatgacccacagtggtgatgtcacaggactagagtttattgaaccagatgtcattgtg
gcctcctcttcaactggatcagtcaccatgtacaaacatcacacagcatcacagactttg
ggaatacagtataagtggcagtctcttcatcgtcatggtaaccattcatgtccctgcacg
tgcctagctgtgcgagataaaacaatcgttacatcgggagaagatgggagactggtgata
ctaaacgcagagcagaaatctccacacagaattatagaaaatgcagacagttctaccatc
aacaatattgttttcctgaagcacacagaagtcattaccgtgaactcctcggggcagctg
aagacctttgaccttcgatcaaattctgatgctccctcacaaaccctttctgtgagcggg
gagttgacctctttacactgtgtggacaaacatcctggtcagcctcacatcgtggccaca
ggaagtcatgatggcgttctcggaatctgggatttacgacaagaagcgtcaccggtctcc
ctcctagaggcccataatggacctatgtgggaagttaaattccataagacaaattcaaac
cacctgttcacttgctcagaagatggcgctgtttggcattgggacgcctcattggttggc
tccagtcacatggtacaaacacagttcacaggtacaggtgcaggttctggtggagcgaat
ttctccctcaatccatctttccagttcggtggaagtgagaatgtgaacaagtggttgtgt
tcagacaacaaaaagatggagatcaattctctgattgacgacaacattctccctgtgaac
tctgtagacattgaatcccagactttgatatgtggaacagactcggaatctctaatcacc
atcaggttacctaccctgaggtag
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