Ostrea edulis (European flat oyster): 125678362
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Entry
125678362 CDS
T09123
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07888
Ras-related protein Rab-5B
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04137
Mitophagy - animal
oed04144
Endocytosis
oed04145
Phagosome
oed04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125678362
04145 Phagosome
125678362
04137 Mitophagy - animal
125678362
04148 Efferocytosis
125678362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125678362
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125678362
04031 GTP-binding proteins [BR:
oed04031
]
125678362
Membrane trafficking [BR:
oed04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
125678362
Endosome - Lysosome transport
125678362
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125678362
Exosomal proteins of other body fluids (saliva and urine)
125678362
Exosomal proteins of colorectal cancer cells
125678362
Exosomal proteins of melanoma cells
125678362
GTP-binding proteins [BR:
oed04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
125678362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
125678362
NCBI-ProteinID:
XP_048772747
LinkDB
All DBs
Position
2:87643838..87652912
Genome browser
AA seq
213 aa
AA seq
DB search
MAGRTGAQRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQR
QASPNIVIALAGNKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKK
LPKNEGGGPAPSRQGGVNLNSQQTQQSEGGCCK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccgaacaggagcacagaggcccaatggagccactcaggggaaaatttgtcag
tttaaacttgtgttgttgggagaatcagctgtgggaaagtcaagtttagtgttacgtttt
gtaaaaggacagttccatgagtatcaagaaagcacaattggagctgcatttttaacacag
acagtgtgtctagatgacacaacagtgaagttcgagatctgggacactgctggtcaggag
aggtaccacagtttagctcccatgtactacaggggggcccaggctgctattgttgtttat
gatatcacaaaccaggacacatttggtcgagcgaagaactgggtcaaagaacttcaaaga
caggccagtccaaacattgtgattgctttggcagggaacaaatcagacctggcacagaag
agaatggtagaatatgaggaggcccaggcatatgcagaagaaaacagtttattattcatg
gaaacatcagctaaaacagccatgaacgtcaatgatatatttctggcaatagctaagaaa
ctgcccaagaatgaaggtggaggaccagcaccctcacggcaagggggtgtaaatttaaac
agccaacaaacacagcaatcagagggaggatgttgcaagtag
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