Ostrea edulis (European flat oyster): 125678650
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Entry
125678650 CDS
T09123
Name
(RefSeq) protocadherin beta-13-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125678650
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125678650
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125678650
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125678650
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125678650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125678650
NCBI-ProteinID:
XP_048773207
LinkDB
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Position
2:complement(72124791..72136695)
Genome browser
AA seq
1134 aa
AA seq
DB search
MSSIFLILLGIFASIHTVKGQLYYKLPEEKPANFYLGNVDNDTKLSDAINDENIRRSMRF
SFLSHGNQYAAYFRISSTTSELYTASKLDRESLEHCAFADSCVLPLEIIAQSTVGTFFRK
ITVYVNIQDINDNPPRFLSSTRTIAVSEASVKDTSFPLDGAVDDDLGLNSIQNYYLIPDD
TPFSVKFTKIADGRSSLALILNGSLDRESVTFYTILIQAVDGGSPKLTGTQTLYVNVTDV
NDNKPKFSSPTYNVTVDEDLLPGSTIMKLSATDADIGLNGQVTYKLSPYQSEDNIVMFDI
DPDNGYLTLAKSLMYEPDEVYRIIIDATDMAKQPLLTQTTVNVKVNDAKNNPPKININLF
SPTTAKILESATKGIAIAHVAVVDDDTGMNGVVNCSIEITEFELQKLATNEYKVILAKPL
NREAYDRYYVELVCTDAGSPSLNSSSSFVVDVLDINDNAPQFSESIYSRSIRENNRFGEK
VLQVSASDADIGNNSEVVYSLDQVGMYDFVINSETGEIFANFIIDRESTGEINFKVVATD
MGDPQLSSVANVNLIILDHNDHKPEFSKPLYKFTVRENLPGRTFIGQVEASDRDAGSNAD
LVYAIVTSSDSLPISVAENGSIYSKQPLDREAIPHGFQFQVVVTDSGVPFSWNSTCYVSV
FIGDVNDNAPNILFPNNVNYTISFLYDIPINSVIGRIRAVDIDYGQNSALSYSFIGSDIF
SIHADKGDIYVTRQLSPQDIDRYTLTVIVEDQGTPSRGQNQTLVITVTSHQGLAPLSEKS
PSDTYMLIAVVISCVTVVLGGVIILIIFLIRRHDRNKHVSAQNTFNNDNRIYDVIDRSTR
TMCPKVAYSVDGRGSVSIDLSVDTSQDQLLGERNSIQSNQSEDEIEKILERITPVPSNYT
RSSRSSSVASQPQFAQIRSSIASKSPSIASMQRGSSSRSSHGHMTKDPSSLLRPDICNIS
QPKSGSQIPRKLCDEDSETSMESNTSDSGRGGSESDVQTGSTIIIPKSKELGSTRSLKIV
YQPDTNHRLKRHLSDQAIPLHDIHPGMLDPIEDQEYIVIKNPNYCPRPRNNSSLKDVNND
RKFKQKPSVHWNPVTRVLQGSVATIDERDDVSSTTSGSYTVELDDMMSREYTQV
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaatcttcctcatcttgcttggaatattcgcctctattcatacggtgaaaggc
cagctgtattacaaacttccggaggagaagccggcgaatttctatctcggcaatgtcgac
aatgacaccaaactctcggacgctattaacgacgaaaatatcagacgaagcatgcgattt
agctttctatcacatggaaaccaatacgcagcttacttccgtatttcatcaacgacaagt
gaattatacacggcatcgaaactggatcgcgaatcgctggaacattgtgcatttgccgat
tcgtgcgttttgccattagaaatcattgcccagtctactgtcggaacgtttttcagaaaa
atcactgtatacgtcaatattcaagatataaacgataaccctccccgctttctttcaagc
acacgaactatagctgtttcagaagcatccgtcaaagacacgtcatttccactagatgga
gctgtcgacgatgaccttggtttgaattccattcaaaattattatttgattccagacgac
acgccattcagtgttaaatttaccaaaattgctgatggccgatcgtcacttgctttgatt
cttaatggatcgttagaccgcgaatctgtgacattttataccattctcattcaagcggtg
gacggaggttctccgaaattgacgggcacacagacactgtatgtaaatgttactgacgtc
aatgacaataagccgaagttcagcagtccaacgtacaacgtgacagtggacgaagatcta
ctcccaggatctactataatgaaactttcggcaactgatgctgatatcggacttaatgga
caagtgacttacaaacttagtccctatcaatcagaggacaacattgtaatgtttgacata
gatcctgataatggttaccttacccttgctaaatctctgatgtatgaacctgacgaggtc
taccgaatcatcatagacgcgactgacatggcaaagcaacctttgttaacccaaactacg
gttaatgtgaaggtcaacgacgctaaaaataacccacccaaaattaacatcaatttattt
tcaccaacaacagctaaaatcttagagtcggcaaccaaaggtattgccatagctcacgtg
gcagtcgttgatgatgatactggcatgaatggtgtagtgaattgttcgattgagataact
gaatttgaacttcagaaacttgcgacaaatgaatacaaggtcatcttggcaaaaccattg
aatcgtgaagcttatgacaggtattacgtggaacttgtgtgcacagacgctgggagccca
tctcttaattcgtcttcatcttttgttgtcgatgtcttggatatcaatgataatgcaccc
cagtttagtgaatctatttatagcagatctattcgagagaacaaccgatttggtgaaaag
gttttgcaagtgtctgcatctgatgcagacattggaaataattctgaagtagtgtactca
cttgaccaggtgggaatgtatgattttgtcattaactcagagactggagaaatattcgct
aactttattattgatagggaatctacgggtgaaataaacttcaaggtggtggctaccgat
atgggtgatccacaattatcctctgttgccaatgttaatcttatcatattggaccacaat
gaccacaaaccagaattctccaaaccactctataaatttacagtgcgagaaaatttaccg
ggtaggacgtttattggacaagtggaagcttctgatagggatgcgggctcgaacgcagat
ttagtatatgcgatagtgacgagctccgattctctgcctatttctgtggcggaaaatgga
tctatttattccaagcagcctttagatagagaggctattcctcatggatttcaattccaa
gtggttgtgacggacagtggagtaccattttcatggaattccacttgttatgtgtcagtc
tttattggggatgtgaacgacaatgccccgaatatattgtttcccaataatgtcaattat
acaatatcttttctttacgatatcccaattaacagtgttattgggaggattcgtgctgtg
gatattgattatggtcaaaattctgcgttaagttattcatttatcgggagcgacattttc
agtattcatgccgacaaaggtgatatttatgtgaccaggcaactttcgccacaggatatc
gatcgatataccctaacggtaattgtggaagatcaaggcaccccgagcagaggccaaaat
caaacacttgtcatcactgtgacttctcaccaaggtctcgcacctctcagcgagaagtca
cccagcgacacctatatgttgattgcggttgtgatttcttgtgtaacggtggttcttggg
ggtgtcatcattctaataattttcctaattagaagacacgataggaataaacacgtttct
gctcaaaacacgtttaacaatgataatagaatatatgatgtcatagataggtcgacaagg
acaatgtgtcctaaggtggcatacagcgtggatgggcggggtagtgtttccattgatctg
tccgtcgacacctctcaagaccagcttctgggagagagaaactccatacaatccaaccaa
agcgaagatgagatagaaaagattctagagagaataacacccgtcccatcaaactacacc
agatcctcccgaagttcctctgttgccagtcaaccccagttcgctcagatccgttcatca
atagcatccaaaagtccctcaatcgccagtatgcaacgcgggtcttcatctcgatctagt
cacggtcacatgaccaaggatccctcttcattacttcgtcctgatatatgcaacatatcg
caacctaaatcgggttcacagattcctcggaagttatgcgatgaggacagtgaaacttcg
atggaatctaatacctctgacagcgggcgaggaggcagtgagagtgacgtacaaaccggg
tccacaataatcattcccaagtccaaggaactaggctccacaaggtctttaaaaattgtt
taccaaccggatacgaatcaccgattaaagcgccacctcagtgatcaagccataccctta
catgacattcatcctgggatgctggaccccatcgaagaccaggaatacatcgtcatcaaa
aatccaaattactgtcccagacctcggaataacagcagtctcaaagatgttaataatgac
cgcaaattcaaacaaaaaccgtctgttcattggaaccccgtgacgcgtgttctccaagga
agtgtggcaactattgacgaacgtgatgacgtcagttccacaacgtcagggagctataca
gtggagttagatgacatgatgtcacgagaatatactcaagtctga
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