Ostrea edulis (European flat oyster): 125678651
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Entry
125678651 CDS
T09123
Name
(RefSeq) protocadherin beta-11-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125678651
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125678651
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125678651
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125678651
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125678651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
RET_CLD1
Cadherin_CELSR2_9th
DUF6377
COX16
Selenoprotein_S
EOS1
Motif
Other DBs
NCBI-GeneID:
125678651
NCBI-ProteinID:
XP_048773208
LinkDB
All DBs
Position
2:72089392..72104152
Genome browser
AA seq
1115 aa
AA seq
DB search
MPGCHSVQIVLFVVSSLLTSYLTGQELTYRIQEEQPTNFFIGNIVNDSKFLEQNTTEKID
RENIRFNILSQGNPLAVYFNINDKTGAFYTNGTLDRESLSHCKFSDNCDIRLDVSAQSTI
GTFFQIIKVKVVLLDINDNKPFFLKDRTNLEISESSIPNSNLSVEGAVDLDSGENTIKTY
ILKPSNSPFVLRYDISMVGTSTLKLVLNQTLDREKIGGYNLVIEAMDGGTPVRTGSLVVA
ITVTDVNDNRPTFSQPNYNISIDETVAVNSVILNISATDKDLGKNGEVIYRLSPYQSDDI
KQMFSINQTHGNLSLIKPLTYYSGEVLKVIIEASDNADQPLISQATVYAKVLDSTNSPPI
INVNLLSNAQTAKISESASVGAAVAHVGVTDEDTGQNGHVTCSVSNPSFRLDKLDVNEYK
VVVNVGLDREKLDQYDITVTCTDSGIPPLSSSSTFKVTVIDMNDHSPRFIKTTYYAEMYE
NNDIGIEILKVSALDFDIGINADIEYSLSQTGRFAFGIDPTFGTIYVNFKTDRENASKIN
FKVVATDKGNPRRSSTSNVAITILDTNDNKPKFTDPPFMFTIPENQRPGLSVGQLTAKDD
DLGNNGTFDFFLSEDKEPNLPFFIFKNGTIITTKALDRETQPHGINFKVVAIDKGTPTSL
NGTGYVTVFMSDENDNYPEIIFPNAENKTIAFLFDLPINSIIGKVEAKDRDFDMNAKLLY
SFVETISFISMDQDSGEIKLNRPLTSDYVNRYPMTVIVEDQGVPKLSSNFSMTIVVLSHH
ILTPVSPQVTENDNYLMIAVIISCVTVVVAGSIILVIFLIRRNDQQKRTLEKNNNGEVVT
KNQNAINDSKEQYDAIDQSMKREKSEKRVSFSMDEEKKYDTLEMERHLYQKNPPKREVDR
ILDTIMPAQNPRVAQVKAVPSPSAYNHQPHSQLGKLQLHQNIINMHANPSQPHCDNDSET
SVESNTSDSGRGGSESDIHSSGGLSQCQELDLLKQLYPRVDNREHHRLKQNSNNVVNLRD
IRPKVRENRRDVPMDNGHRKYADRRVNQYGDPVDIHGISMSAYKPNKYMHFNSMSDILDG
SMMTNDDDDDLSTTTSGSYTVDDLDDNSLYPECVV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgccgggatgtcacagtgtacaaatagtgcttttcgtggtctccagcctcctgacttcg
tatctaacgggacaagaattaacataccgaatccaggaggaacaaccaacaaactttttc
atcggaaacatcgtcaacgattctaaattcttagaacaaaacaccacagaaaaaattgat
cgtgaaaatattcgtttcaacattctctcgcagggaaatcctctggccgtgtatttcaac
attaacgacaaaactggggcgttctatacgaacggaacactggacagggaatctctttca
cattgtaaattttcagacaattgtgacattcggttggatgtgagtgcacaatcgacaata
ggtacgtttttccaaatcataaaggtgaaagtcgtgttgttagacatcaatgataataag
ccattttttctgaaggatagaacgaacctggaaatttcggaatcatcgattccgaattca
aatctttctgttgagggagctgtggacttagatagtggcgagaacacaattaagacatac
atcttgaaaccatcaaattcacctttcgttttgagatatgatatttcaatggttgggaca
tctacgttgaagctagttcttaaccaaacattagaccgagagaaaattggtggttataat
ttagtgatagaggcaatggatggcggaacccctgtcagaaccggaagtctagtggtcgct
attactgtaacggacgtaaacgacaatcgaccaacatttagccaaccaaactacaacata
agcatagacgaaaccgtagcagtgaattcagtgattctaaacataagtgccacagacaaa
gacttgggcaaaaatggagaggttatttaccgactcagtccttaccaatcagacgatata
aagcaaatgttttcgatcaaccaaacccatggaaatcttagtctaatcaaacctttaact
tattactctggtgaagttctaaaagttataattgaagcatcagataacgctgatcaacct
ttgatctctcaagcaactgtgtatgctaaggtactagattcaacaaatagccccccaatc
atcaacgttaatttgttgtcgaatgctcagaccgctaagatctctgaatcagctagtgtc
ggggcagctgttgcgcatgtgggcgtaacagacgaggacacaggtcaaaatggacatgtc
acctgctccgttagtaaccctagctttcgactcgataaactcgatgtaaatgaatataaa
gtagtagtaaacgtcgggttggatcgagaaaaactcgaccagtacgacatcacggtgaca
tgtactgattccggcattcctccactgagttcgtcctcgaccttcaaggtcacggtcatt
gacatgaacgatcattcccctaggttcatcaagaccacttactatgcagaaatgtacgaa
aacaacgacatagggattgaaatcctaaaagtttcagctttagatttcgatataggcata
aacgccgacattgaatactctctgtcgcagactggacgtttcgctttcggtattgaccca
acctttggtacaatatacgtaaacttcaaaaccgatagagaaaatgcctccaagatcaat
ttcaaagtggttgccactgataaaggaaatccaagacggtcttctacctcaaatgtagcc
attaccattctagacacaaacgacaataaacccaaatttacggaccctccgttcatgttt
accattccggagaaccagagacccggactatctgtggggcaattgacagctaaggatgac
gatctagggaataatggcacatttgacttctttctatccgaagataaggaaccaaatcta
ccattctttattttcaagaatggaactataatcaccaccaaagctttagatagggaaact
cagccgcacggaatcaacttcaaggttgtagctattgataagggcacgccgacatcccta
aacggtaccggatacgtgactgtatttatgtctgatgaaaacgacaattatcctgaaata
atatttcctaatgcggagaacaaaaccattgcatttctatttgatctcccaatcaatagc
atcattgggaaggtagaagctaaagatcgggactttgacatgaatgccaagctgttgtac
tctttcgtcgaaaccattagtttcatctcaatggaccaagacagtggggagataaaacta
aatagaccgctaacatcggattacgtcaatcgataccccatgactgtcatcgtagaggat
caaggtgtacccaaattatcctccaatttctcgatgaccattgtggttttgtcccatcat
atccttactcctgtttctccacaagtgacagaaaatgacaactacctgatgattgctgtt
atcatttcgtgtgtaactgtagtcgtggcgggaagcatcatcctcgtgatctttctcatc
aggcgaaacgaccaacagaaacgtaccctggaaaagaataacaacggtgaggtcgttaca
aagaaccagaacgccattaatgactcgaaagaacagtatgatgcaattgatcagtccatg
aagagggagaagagtgagaaacgagttagcttctcaatggatgaagaaaagaaatatgat
accctggaaatggaacgccatctgtaccaaaaaaatcctcccaaacgggaggtagatcgg
atcttggacaccattatgcctgcacaaaatcctagggtggcgcaagtaaaggcggtgccc
agcccctccgcctacaaccaccagccccactcacagctaggaaaacttcaacttcatcag
aacatcatcaacatgcatgcaaatccgtctcagcctcactgtgacaacgacagcgaaact
tccgtggaatcgaacacctctgacagcggacggggaggaagtgagagcgacatccacagc
agcggcggcctctctcagtgtcaggaactagatttgttgaagcagttatatccccgtgtt
gataatagagagcatcatagactaaaacagaattcaaacaatgttgtgaatttaagagac
attagaccaaaagtcagggaaaacagaagagatgttccgatggataacggccatcggaag
tacgcagaccgacgagtcaaccagtatggcgatcccgttgacattcatggcatttcaatg
tccgcttataaaccgaacaaatatatgcattttaattctatgtcggacattttggatgga
agcatgatgacaaacgacgacgatgatgatcttagtacaaccacttccggtagttatact
gtggatgatttagacgataacagtttatatccggaatgtgtcgtctga
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integrated database retrieval system
