Ostrea edulis (European flat oyster): 125678652
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Entry
125678652 CDS
T09123
Name
(RefSeq) protocadherin beta-13-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125678652
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125678652
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125678652
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125678652
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125678652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
EphA2_TM
TM_ErbB1
TMEM154
DUF1071
DUF3377
Motif
Other DBs
NCBI-GeneID:
125678652
NCBI-ProteinID:
XP_048773211
LinkDB
All DBs
Position
2:72242547..72268591
Genome browser
AA seq
1104 aa
AA seq
DB search
MANRPTMGSVLRNSWILWIFVTSCGSVDIVYNITEEQGANVTLGNIFIDARLGEFHNESH
TDKLKYSFLSPSPHYFVIDPETSNLKTAENLDREKICPYKEDCTIPLEIAVQSEIAAFFE
KIQIMVNLLDINDKTPAFPQSSTDLKISEGAVLSKSFVIDGAIDQDSEEFSVKRYQVKPD
GTPFDVIFYKNLDDSLSVKLVVNQSLDREKRSHYDIQVLAYDGGSPPKVGMMRVNITVDD
INDNSPVFDNSNYNVSVKEEIAVNSTILQLRATDKDIGKNSEILYKISTNQPEKVQELFF
VNENTGELKIAKQLIYEPSEKYRLIVEAYDKGEQPYMTQAFVNVYVQDSGNNPPEIKINL
LTDSDRAQVSEYANRGAVVAHIRVIDNDAGANGIVSCNISNNQFTLQKLEVQEYKVTVDK
PMDREAMDEHFVIIRCQDIGTPPLSCNASFRVQVTDENDQAPRFSQNEYHAKIPEGNKPG
DAIIQILATDNDLGDNARIHYKLHGDAGADVTVDADTGTIRANKVYDRETVPQYRFHVYA
VDSGDPPRSSTATIVVNIQDKNDNFPEFTQTQIRASVQENVPFDTFVLQLTATDKDYGDN
GKVLFSLPKHSEVPFFLTPNGTLVVNGNLNREVKNRYTFTAIASDYGNPPNRNSVAVQVD
ITDANDNEPIIVFPNASNDTVKVSVSSTLNMMVAQIQAYDIDEGENKTLVYSIAGRNDSD
IFNINSLTGEVIVARPLHVRYVASYFLRIAVSDKGIQPLTKYENLHLVVVKTNTTTSVAT
HSEGDDELNMRIVVAVVVVTLVLSTSILITIFFVRRRDLKRKELNARTEAKANANTCPKV
YLDPPKYVAPGQNVSMFYSDEAEGVRRNGQNMYQLPDPAVGRDKHSRSESPNDEARQSEL
NRMASIRLHQKLVQSHDKQWPGHSSELNKERPDNHSDTSGETIQSDSGVGISEGETRSTM
SHSHHTDDIRSKFGPSQVGRRGTPPNPSHNLHYQHHPYSQPPPLYENLVELQQYPRLLGD
TSHHLPVHVRTFYQPKASTSPASSIPSYRHFSSGIYAARSVDETLDSVATGYDDDDTTTS
GSYTIDADEYPIEVRIQKVPDVFV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagacccacaatgggctcagtgctgagaaactcgtggattctgtggatcttt
gtaactagttgtggatctgttgatattgtatataatatcacagaggagcagggggccaat
gtgacacttgggaacattttcatcgatgccagactcggggaatttcataatgaaagtcat
acggacaaattgaaatactcatttcttagtccatcacctcattattttgtcatagatcct
gaaaccagcaatttaaaaacagcagagaatttggacagagagaaaatttgtccttacaaa
gaagattgtacaattccattagagatagcagttcagtctgaaattgcagcatttttcgag
aaaatccagatcatggtgaatcttttagatatcaatgataaaacaccagcatttcctcag
tcttccactgatctcaagatttcagaaggtgctgtactgtccaaaagttttgtcattgat
ggagctattgaccaagacagtgaagaattttctgtaaaaagataccaagtaaaaccagat
ggaactccatttgatgtcattttctacaaaaatctggatgacagtttgtcagtgaaatta
gtggtcaatcaatctttagacagagagaaaagaagtcattatgatattcaggttctggct
tatgatggtggttctcctccaaaagttggaatgatgcgagttaacataactgttgatgat
atcaatgataacagtccagtgtttgataattccaattataatgtgagcgtcaaggaagaa
attgcagtgaattctaccattcttcaattaagagccactgacaaggatattggcaaaaac
agtgaaattttatataaaatcagcacgaaccaaccagaaaaagtacaagaactgtttttc
gtaaatgaaaacactggagaacttaaaattgcaaaacagttgatctatgagccgagtgag
aagtatagattgattgttgaggcatatgacaaaggggaacaaccctacatgacccaggct
tttgtaaatgtctatgtacaggactctggcaacaatcctccagaaattaagatcaacttg
ctgactgattctgatcgtgcccaagtgtcagaatatgccaacaggggagctgtagtggcc
catatccgagtgattgacaatgatgctggggcaaatggcattgtcagttgtaacatcagc
aacaatcagtttacacttcagaagctggaggtccaggaatataaagtgacagtggataaa
ccaatggaccgtgaagctatggatgaacattttgtgattatcagatgtcaagacattggt
acaccaccccttagttgtaatgcaagttttagagtgcaagtcactgatgaaaatgaccag
gctcccagattttctcaaaatgaatatcatgctaaaattccggaaggcaacaaaccagga
gatgccatcattcagattttagccactgacaatgatcttggcgacaatgctaggattcat
tataaacttcatggcgatgctggtgctgacgtcacggtggatgcagacactgggacaatc
cgtgccaacaaggtatacgacagagagactgtgccgcagtatcgctttcatgtttacgcc
gtggattctggagatcccccacgctcctccactgccaccattgttgtgaatatccaggac
aaaaacgacaactttcccgaatttacacagactcagatcagagcttctgtacaagaaaat
gtgccttttgatactttcgttcttcaattgacggccactgacaaggattacggagataat
ggaaaagttttattctctcttcctaagcattcagaggtaccctttttcctgactcccaat
ggaaccctggtagtcaatgggaatcttaatagagaggtgaaaaataggtacacatttaca
gccattgcttcagattatggcaaccctcccaacaggaactcagtggctgttcaggtggat
atcacagacgccaatgacaatgaaccaatcatagtgttccccaatgcttctaatgacact
gttaaagtatcggtcagctcaacactgaatatgatggtggcccagattcaagcttacgac
atagatgaaggagagaataaaactcttgtgtactccatagctggcaggaatgattcggac
atctttaatatcaatagtttgactggggaagtcattgtggccaggcctttgcatgttaga
tatgtggccagttactttctcagaattgctgtttcagataaaggaatccagcctcttaca
aagtacgagaacttacatttggtggttgtgaaaacaaataccaccacatctgtggcgaca
cattctgagggagatgatgagctaaacatgagaatcgtggtagcagttgtggtggtcacg
ctcgtcttgtcaacatccattcttattacaatattttttgtaaggcgaagagatttgaaa
agaaaggagttaaatgcacggactgaagcaaaagcaaatgcaaatacttgtccaaaagtg
tatttagatcctccaaagtatgttgctccagggcagaatgttagcatgttctacagtgat
gaagcagagggggttagaaggaacggccagaacatgtatcagttaccagatcctgcagtc
ggccgggacaaacacagcagaagtgaatcacccaacgacgaggcccggcagtcagagtta
aacagaatggcttccattagacttcaccaaaaactggtccagtctcatgacaaacagtgg
ccagggcacagctcagagcttaacaaagaaagaccagacaatcacagtgacacctcaggg
gagacaatccagtctgatagtggtgtaggaatcagtgaaggagaaaccagaagcaccatg
tctcactctcatcacacagatgatattcgaagcaagtttggtccctcacaggttggaaga
agaggaacacccccaaaccccagccataatcttcattatcaacatcacccatactcccag
ccaccccctctgtatgagaatttggtggagctacagcagtaccccagactattgggggac
acatcacatcatcttcctgttcatgtgaggacattttaccagcccaaggcttccacaagt
cctgcatcatccatcccgtcgtacagacacttctccagtggaatatatgcagcaagaagt
gtagatgaaactttagacagcgttgctacgggttacgatgatgatgacactacgacatcc
ggcagctacacaatcgatgcggatgaatatccaattgaagtacgcattcaaaaagtgccg
gatgttttcgtatga
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