Ostrea edulis (European flat oyster): 125678653
Help
Entry
125678653 CDS
T09123
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125678653
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125678653
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125678653
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125678653
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125678653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Sde0182_C
Cadherin_CELSR2_9th
ECSCR
Orf78
Motif
Other DBs
NCBI-GeneID:
125678653
NCBI-ProteinID:
XP_056013141
LinkDB
All DBs
Position
2:72575854..72623916
Genome browser
AA seq
1101 aa
AA seq
DB search
MERIILSLITLACLCACISTQNLVTFHLQEDQPNNTLIGSLEEETGLSKIINESLKDLKF
TLKKKEEPIISLFRLAESSQLFTNQVIDREKVAACQYKTQCVFNFDVIVTSSASSYFGSI
SVHINVTDVNDHSPTFDPNHFQLNLPESTTANKSVYRLEPAQDLDMGGNNSVQSYQFIQI
TPAVSTTMDFRMEEITSSFDGLSRNIFTNVTLDYERQKLYVYHILARDGGNPQRTGTFTL
EINVVDENDNTPIFDTLQASVTIEENTPINTPFYVFHASDKDSGNNGKIEFRFKKFQEQW
QEIAALFSIENDTGTVRVIGNLKYEHGKVYHIIVEATDKGVIPRYSSAQLDVTVKDSGNN
APKININFLFDDLGNNTMSVSEDAILEQAIAVINVEDSDTGSNGEVTCRTYNTFFGLQSL
NDGYKVIVQHYLDRENKSSHRIKITCADKGTPVLESVVEFTVILTDANDNPPKFSEFYYN
AKVNENNNRGKQIIQVQATDKDIGENGQISYFIEPPTDNRFSIGRETGIVTANVDFDREQ
SVHVTFTVRATDHGNPPQNTTANIWLDIEDVNDNPPNFLKANFVFSVDENLDESSFVGAV
QAVDNDEGKNGEFVFKISDDYTNKSVIPFNVSQSGEIKTYQPLDREILNRYDFHVIAVDK
GDPSLTGTAHVTVNINDKNDNAPIFIFPSTDNHTIIIPNTTPLESIIASIQAYDLDEDSN
GYGNGRVMFYIDGGNEGDVFYLNHDTGSLHFRKYVGVAEDYTFHLKIRARDSGREALEAT
RDLDIVVKYMNATTGSLQNQDDSDKNILIVVIVVCVTIVVSVALIALICMLRRKSEDKMK
DDGPPFLASRSPTSTLYDRPPPAYLNVSQADKPTRPRVSFSKDNDTFTKQQLMEKMTGTP
NGRMEPGKYTNHSHQNPKSHTEESPSETSGETIPSDSGHGGSEEDFTSHSHNNNIDKRIP
LQPSYLKNGVFMMQEPLNNQTNTLPSERRLNSVSSSKPVSKYMDDSLLTSSINSLWSDNH
TINRQNSNNVQKLPTIPAWAGYHTSDRMNDSLLFYSKDTTLGSHSAHSRDDDECTTTSGS
YTINPDEIDDSFDNRPRDMFV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcatcattttatcattgattacactagcctgtctctgtgcatgtatttcgaca
caaaatttagttacattccatcttcaggaagaccagccgaacaacactctgataggaagc
ttggaagaggaaactggcctttctaagataattaatgaatcactcaaagacctcaaattt
actctcaagaaaaaagaagagcccataatttcgctatttcgtctagcagaatctagtcaa
ctctttactaaccaagtgatagacagagaaaaggtggcagcgtgtcagtacaagacacaa
tgtgtgttcaactttgacgtcattgtgacgagctcagcttccagttacttcggttccatc
agtgttcatatcaacgtcaccgatgtcaacgatcacagtcccacgtttgatccgaatcat
tttcaactcaatttaccggagtccaccacagctaacaagagtgtgtacagacttgagccg
gctcaggatctggatatggggggcaataactcggtgcaatcgtaccagttcatccaaatc
acaccagcagtttccacaaccatggatttccgaatggaagaaataacatcatcgtttgat
ggattgtctcgtaacatcttcaccaatgttacattggattacgaaagacagaagctttat
gtttatcacatactcgcaagggatggaggaaaccctcagagaacggggactttcaccctg
gaaatcaacgttgtggatgaaaatgacaacacccctatttttgacacactacaagcttct
gtaaccattgaggaaaacacccctattaatacccctttctacgttttccatgcgagtgat
aaagattctggcaataatggtaaaattgaattccgattcaagaaatttcaggaacaatgg
caggaaattgctgcattgttttccattgagaatgatactgggacagttagagtcattgga
aacttgaaatacgagcatggaaaagtctaccacataatcgtggaagcaacagacaaagga
gtcattcctaggtattcctcagctcagctggacgtaacggtgaaggactctggaaataat
gctccaaaaattaacattaacttcctgttcgatgatctcggcaacaatacaatgagtgtt
tccgaggatgccatcctggagcaggctattgctgtgatcaatgtggaagattctgacacc
ggttctaatggagaggtgacttgtcggacttataacaccttctttggtctacagagtttg
aatgatggatataaagtcattgtgcagcactatttggacagggagaataaaagtagtcat
cgcattaagatcacgtgtgcggacaaggggactccggtactggaaagtgtagtggagttc
actgtgattttgacagatgccaatgataatccaccaaagttctctgagttctactataat
gctaaagtcaatgaaaacaataacagagggaagcaaatcatccaggtccaagccacagat
aaagacattggagaaaatggacaaatttcttacttcattgaaccaccaaccgataatagg
ttctccattggtcgcgaaaccggaattgtgactgctaatgttgattttgacagagagcag
tcggtacacgtcacattcactgtcagggctacagatcatggaaatccacctcaaaatacc
acagctaatatttggttggatattgaggatgttaatgacaatccaccaaattttttgaag
gccaattttgtcttctcggtggatgaaaatcttgatgaaagttcatttgtgggagcagtg
caagcagttgacaatgatgaaggcaaaaatggggaatttgtctttaaaatttcggatgat
tatacgaacaagtctgtcattcctttcaatgtttcccagtcgggagaaattaaaacctac
cagccattagacagggagattttgaaccgatacgacttccatgttattgctgttgataaa
ggagacccatctttaacaggaacagctcatgttacagtcaacatcaatgacaaaaatgac
aatgcaccaatttttatcttcccaagcactgataatcacaccattatcattcccaatacg
actcccctagagtccatcatagcttctattcaggcctatgacttggacgaggattcgaat
ggctatggcaatggaagggtcatgttttacattgatggaggaaacgaaggagatgttttc
tacttgaatcatgacaccggaagtcttcacttcaggaagtatgttggcgtggctgaggac
tacacgttccacttgaaaatccgggcgcgtgatagtggtcgagaagcattggaagcaaca
cgagaccttgatattgttgtaaaatacatgaatgccaccactggttctttgcaaaaccag
gacgactcggacaaaaacattctgattgttgttatcgtggtttgcgtgaccattgtggta
tctgtggcactcatcgccctcatctgcatgctgcgacgaaagagtgaggataagatgaag
gatgatggtcccccgttcctggcctcgcgatcacctacctccaccctttatgaccggcct
ccaccagcatacctcaatgtttcacaggcagacaaacccaccagacccagagtcagcttc
tccaaggacaatgacacgttcactaaacagcagctgatggagaagatgactggaacccca
aatggaaggatggagccaggaaaatatacaaatcacagtcatcagaaccctaagtcccac
acagaggagagcccaagtgaaacttcaggggagacaatcccgtctgacagcggacatggg
ggatcagaggaggattttactagtcatagccataataacaacattgataaaagaatacca
ttacaaccatcttacttgaagaatggagtattcatgatgcaagagcctttgaacaatcaa
acaaacactctgccgagtgagagacgattaaattcagtgtcgtccagtaaaccagtgtct
aagtacatggacgacagtttattaacatcgagtatcaattcactgtggtcagataaccac
accattaacagacaaaacagtaacaatgtgcaaaagttacccacaattcctgcttgggca
ggatatcatacaagtgatagaatgaatgacagtttgttattttattccaaagacacaaca
ctgggaagtcacagtgcccacagtcgggatgacgacgagtgcacgacaaccagcggcagt
tacaccatcaatcctgatgaaattgatgatagtttcgacaacagacccagggatatgttt
gtgtag
DBGET
integrated database retrieval system
