Ostrea edulis (European flat oyster): 125678658
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Entry
125678658 CDS
T09123
Name
(RefSeq) protocadherin beta-11-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125678658
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125678658
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125678658
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125678658
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125678658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_pro
DUF5527
gp6_C-domII
Motif
Other DBs
NCBI-GeneID:
125678658
NCBI-ProteinID:
XP_048773223
LinkDB
All DBs
Position
2:complement(72310803..72326545)
Genome browser
AA seq
1045 aa
AA seq
DB search
MWRCSVFMSIFLLVTCHGREIIYSIDEEIPNGTYIGNVAMDSNLMSEMTPSDFRTLRYSI
LSGDSYVSLFTINQTSGNLYTAQVVDREQVCRFSTVCKISLEAAAQSSIRSFFTKILLTI
YIQDINDHSPVFPRSSMRLDIPESTLIGNSFTIDGAKDADTSPNYTLNSYTLEQTNSPFS
LSFVKNLDGTSIVKLVVDKALDREVQDSYNLIVIASDGGNPPRSEKLLVNVRITDVNDNA
PMLSSTIYNVSVKEDIAVGSVILTLSATDLDTGKNADIRYRLSSHQSENIKQLFAINETT
GELSVAKTLPYNDGNPYRVIVEASDLGDQPLTTQTSVKVTVIDSGNNPPEIHVTLLPTSD
VARISEDTSVDAAIAHVVVIDSDSGMNGYVTCTLDNSYFRIDRLEVNEYKVTVAQPLDRE
TSPNHTITIVCSDSGNPPLTSTHTFKVIILDSNDNAPKFSSNIYQGSIPENNRKGAQVIR
VQATDADEGINGEVRYQLLSSNETLQYQLAIDAVTGSVTTGISFDREIIPSFVFKIIASD
KGSEPLSATATVMVKVIDENDVAPTFLENMFLFKVSEQKPPGTTVGRLMAGDLDEGVNKE
FEFYVESGTQPFNVTKDGVVLTTRSLDRESQEIFEFAVFVADKGQPPKSSSARVKVTVAD
ENDNSPRFLFPTSTNNSVLVSQNIKPGTIIARLRARDPDKEQNGQITYGIEGTNFSEVLY
ANIDTGDIIAKKALEEYSGQTFSLVAVARDRGLVFQISRMEFFVKVAGAESLASNSQTNI
TIVIVLVTVTLALSGFIILTICIIRWLDNNRKDPREIMKVEKTFSSPSDTKEIDHKLSIA
NRYIEGADDPCSMKKVPNHHRYIDSLDVDRRHKSQVTFAPDIKDEETSLSVPNPVYGEHL
PNFPRHQTEDNQSNCSMNSTNSDSGRGLSDDEARDGIGRGMLYHSRKGKFRSSMPSPINI
LHQERSTNFFPDRTSPLSPINLPARAGSSHGSSFKYQCRQNTNFDVHHTFSFHEKPRLQE
QDSDGTSGIHTMEEIPSPHFSGNVV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtgttccgtgtttatgtcgattttcctccttgttacctgtcatggacgagaa
attatctacagcatcgatgaggagattcctaatggaacttacattggtaacgttgcgatg
gattctaacctgatgtcagagatgactccgagtgatttccgaacccttcgttacagtatt
ttatcaggggatagttacgtatcattgttcaccataaatcagacttcaggtaatctgtac
actgctcaggtagtcgaccgtgaacaagtgtgtcgcttttcaacagtttgtaaaatatct
ttggaagccgcggcacaatccagcatacgcagttttttcactaagattctgttgacgatc
tacatacaagacatcaatgatcattctcctgttttcccaagaagttccatgcgactggac
atcccagagtccacactcatcggaaactcctttacaattgacggtgccaaagatgcagat
actagccctaactacacactaaactcctacacgttagaacaaaccaattcacccttttcc
cttagctttgtcaagaatttagacggtacatccattgtgaagttagtcgttgataaagcg
cttgatagagaagttcaagactcctataacctcattgtcattgcctctgacggcggcaat
cccccaaggtcagaaaagttactcgtgaatgtcaggattacggacgtcaatgacaacgcg
ccaatgctcagcagcacaatctacaacgtgtccgtaaaggaagatattgctgtcggaagt
gtaatcctcaccttgtccgcaaccgaccttgacactggaaaaaatgcagatatcaggtat
cgtctaagttcgcatcagtccgaaaacattaaacaactgttcgcaataaatgaaactact
ggtgagttaagtgttgcaaagactttaccttataatgatgggaacccctatagagtgatc
gtagaagctagcgatttaggggatcagcctctaacgacccagacctccgtcaaggtcact
gtcatcgattccggaaataatcctccagaaatacacgtcactcttcttccaacgtctgat
gttgcgcggatttctgaggatacctccgttgacgccgcgatagctcatgttgttgtcatt
gacagcgattccggcatgaatggttacgtcacgtgcacgctagataactcgtacttcaga
atagacagacttgaagtcaatgagtacaaagttactgttgcgcaacctctagaccgcgaa
acatcgccaaatcatacgataacaattgtgtgctcggactctgggaaccctccattgacc
tcaacacatacatttaaagttatcattctggactcaaatgacaatgcaccaaagttcagt
tcaaatatatatcaaggaagtattccagaaaataatcgcaaaggagctcaagttatccga
gtacaggcaactgatgcagacgagggtataaacggtgaagtgcggtatcaactcctgtct
agtaacgagaccttgcaatatcagctggcaatagacgctgtcacaggcagtgttacgaca
gggatttcatttgaccgggaaatcattccgtctttcgtattcaaaatcattgcatctgac
aaaggatctgaacctctgtctgcaaccgcaactgtgatggtcaaggtcattgacgaaaac
gatgttgccccaacctttcttgaaaacatgtttctattcaaagtctcggagcaaaaacca
ccaggaacgactgttggtagactcatggctggagaccttgatgaaggagtgaataaagag
tttgagttttatgttgagagtggcactcagccgtttaatgtcaccaaagatggtgtcgtc
ttaacaactaggtcattagaccgagaatcgcaggagatatttgaattcgcagtttttgtt
gctgacaaaggtcaacctccaaaatctagctcagctcgagtaaaagttacagttgctgat
gagaatgacaacagtccaagattcctcttcccaacgagtactaacaattcggtcctagta
tcccaaaacatcaaaccaggaacaataatcgcacgcttgcgggctagagacccagacaaa
gaacagaacggtcagataacttatggcatcgagggcacaaacttttctgaagttctctat
gccaacattgatacgggtgatataattgccaagaaagcactcgaagaatactctggtcag
acttttagtcttgtggctgttgctagggatcgtggactggtgtttcaaataagtcgaatg
gagttctttgtcaaggttgctggtgctgaatctctggcctctaacagccaaactaacatt
actatagtgattgtattggtgaccgtgaccctagctctctctggcttcattattttgaca
atctgtataattcgatggctggacaataaccgtaaggacccaagggaaataatgaaagta
gaaaagacattctcttctccgagtgataccaaggagatagatcataagttatcaatcgca
aatcgatatatcgaaggagcagacgatccttgttcaatgaagaaagtgccgaatcaccac
cgatatatagattcactagacgtcgacagacgacacaagagccaagtgacctttgcccca
gatattaaggacgaagagaccagtcttagtgttcctaatccagtctatggggaacatctc
ccaaactttcccagacatcagacggaggataaccagagtaactgttccatgaactcaact
aatagtgacagtgggcggggcttgagtgatgacgaggcacgtgatggcatagggagaggg
atgctgtatcacagtagaaaaggaaaatttagaagcagtatgccttctccaattaatatt
cttcatcaggagaggtcgacaaacttttttcctgataggacatcgcctttatctcctata
aaccttcctgcccgggcgggaagttcacatggaagtagttttaaataccagtgtcgccaa
aatacgaacttcgacgttcatcatacatttagtttccatgaaaagccccgacttcaagaa
caagacagtgatggaacttccggaatccatacaatggaggaaattccttccccacatttt
tctggcaacgtcgtttag
DBGET
integrated database retrieval system
