Ostrea edulis (European flat oyster): 125678659
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Entry
125678659 CDS
T09123
Name
(RefSeq) protocadherin-11 Y-linked-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125678659
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125678659
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125678659
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125678659
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125678659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125678659
NCBI-ProteinID:
XP_056013148
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All DBs
Position
2:complement(72200319..72207410)
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AA seq
1042 aa
AA seq
DB search
MEIWIMVLFFPLHFTFGQIVEYSVPEEKAPNTYIGNVEQDANISLLAQPDDLMNMEYRIL
SQSNPNAGLFSIKEDATLYTAKQIDRETVCKFEDICILRVDVIARSSSGNFYQKIQLNLQ
ILDINDNYPKFSRGSIDVELSEGSSVGTSVQIEGAIDADTGVYSVQDYVISPTDSPFDVH
FQKNVDGSSIAKLVLRETLNREDREYYLIQVLAQDGGNPPRSGVLNVNIYVTDVNDNSPV
FITSNLNVTIDEDAAINSTITVIRATDADKGNNSLVMYSISEHQDARIQTLFGVEHYTGR
LLLKESLIYEPGESYKIIIEASDSAKQPRISQTQVTVNVNDTHNNPPQITVDPLSNSADA
EISENAKLGAPVAHITVFDPDTGYNGRVNCSVDDAAFAVQKFGQTNNYKVEYKVVVIQAL
DREVLGVYRVTVLCEDEGHPKLNASATFHVRLIDENDNYPIFSHQKYRVSKAENNMIGDV
LLQVTATDKDSSDNSQIRYILQSSSDNFQINSVTGQIKTNFRMDRETAGEHKLTVYAVDQ
GVDPKTGSAEITVQVTDLNDNAPVFENDNLDFNVPENFGRNVTVGVLLASDRDSGENKRV
SFSIDPQSKPDLPFEVFSNGSIIAVNNLDREDQSIYTFGVIAEDRGVPSQSTRADVTVHV
LDMNDNAPVFIFPSANNNTVTISYQTQPNQVIARLKTTDSDEELNSKVTYFTPNKNLSHL
FQINSLSGRVILTRVLTEADVASYTMIVYAQDKGTPPKITDAFLTIVISNIPLDGAQVSP
VEEEHKFYLIAIAITCVTGVIAVVIILTICLIKRADRLKMKYQQSNNECEVNHGYESRKK
VSFSVDIPDSPKVVTHVTSNQLYSALADQVPGSASSRLNYQPRYHNEKHDRQRRQNTPNA
CKASHYVSHDVDTNSNHSADSATSDSGRGGSDDMNTSSMFPSSLDFDHDSRSTRSNRDFR
LTLPHYERDKSQTQTVHSSDFFNLDFSYNSSPNPNLNIIYPHGLVPYNSTGNDDSTTTSG
SYVLDPEEEINEIIQPSNRCIV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagatatggataatggtcctattttttccgctgcatttcactttcggacaaattgtg
gaatacagtgtaccagaagaaaaggcacctaacacttacatagggaacgtagaacaggat
gccaatatctctctactagcccagcccgatgatttaatgaacatggaataccgcatttta
tctcagtccaaccccaatgcaggattattttccataaaggaggacgccaccctctacacg
gccaaacagatagacagggagaccgtttgcaaatttgaagacatttgcatcttaagagtg
gacgtaatcgcgagatcatcatctggaaatttttatcagaaaattcagctcaaccttcag
atcttggacattaacgacaattatccaaaattctcaagaggcagcattgacgtggaattg
tccgagggttcgtcagtcggcacatctgtgcagatcgagggtgcaatcgatgccgacact
ggcgtatactccgtgcaggattacgttatttcgcccactgatagtccattcgatgtccac
tttcagaaaaacgtagacggtagctccattgcgaagttagtactgagggaaacgctgaac
cgagaggatagggagtattacctcatccaggttctggctcaagatggcggaaaccctcca
cggtcaggcgtcctcaacgtcaacatatacgtcacagacgtcaacgataactcccccgtt
tttatcacctctaacctaaatgttaccattgacgaagatgctgccataaattcaactatt
actgtcattcgggcgacggatgcagacaagggaaacaactcattagtcatgtacagcata
agtgaacaccaagatgcccgtatccaaactctttttggagttgagcattacacaggtcgt
cttctgctgaaagaatcgctgatttatgaacctggggaaagttataagattatcattgaa
gctagtgatagtgcaaagcaaccgaggatttctcagactcaagtgacggttaacgttaat
gatactcacaataacccacctcagattactgtagaccccctttcgaacagcgctgatgcg
gaaatttcggaaaatgccaaactcggtgcaccggtagcacacattactgttttcgaccca
gatacagggtataacggtcgagtgaattgttctgttgatgacgccgcttttgctgttcaa
aaatttggtcagacaaacaattataaagtggaatataaagttgtcgtgatacaggctttg
gatcgggaagtgttgggagtatacagagttaccgttctttgtgaggatgaaggtcatcct
aaacttaatgcatccgcaactttccatgtgcgtttgattgacgaaaacgacaactatcca
atctttagtcatcagaaatacagggtaagcaaagctgagaacaacatgattggcgacgtg
ctcttacaagtgacagcgacagataaagattcaagtgacaattctcaaattagatacata
ttgcaatcatcttctgataattttcaaataaattccgtcactggacaaatcaaaactaac
tttcgtatggatagagaaacagctggtgaacacaaactaacggtgtatgcagtggaccaa
ggtgtggatccaaaaactgggtcggcggaaataaccgtccaggtgacagaccttaatgat
aatgctccagtttttgaaaatgataatttggattttaatgtgccagaaaactttggacgt
aatgtcacagtaggggtattgctggcatccgacagagacagtggtgaaaataagcgagta
tcattttccatagacccccagtcaaagcctgatctcccgtttgaagtcttctccaatggc
tctataattgctgtgaacaacctggatcgagaggatcagtctatctatacattcggggtg
attgcagaagatcgtggtgttccctcccaatccacccgggctgatgtgaccgttcatgtc
ctagatatgaacgacaacgccccagtatttatattcccctcggccaacaataatacggtt
actatctcctaccagacccaacccaaccaggttattgcgcgcctgaagacaacagattca
gacgaagagctaaattctaaggtcacatactttacacccaataagaatctctctcatttg
tttcaaatcaatagcctttctggaagggttattttgaccagagttctcacagaagccgat
gtcgcttcctacaccatgatagtgtatgctcaggacaagggaacccctccaaaaattaca
gacgccttcctgacaattgtcataagcaacataccccttgacggagctcaagtatcccct
gtggaggaagaacacaaattttacctcattgctattgctatcacctgtgttacgggagtg
atagcagtagtaatcattttgacaatttgtttaattaaacgtgcagatcgccttaaaatg
aaatatcaacaatctaataatgagtgcgaagtgaatcatggttacgagtctaggaaaaag
gtcagcttctcggtggatattccggattctccaaaagttgttactcacgtgacgtcgaat
caactttattctgctttagctgaccaggtacctgggagcgcttccagtcgtttgaactac
cagcctcgataccataatgaaaagcatgatagacaacgaagacaaaatactcccaatgct
tgtaaggcttcacactacgtcagccatgatgttgacaccaacagtaaccactcagctgac
tcagcaacaagtgacagcgggaggggcggaagtgacgacatgaataccagttccatgttc
ccgagctctctagattttgatcatgacagcagatcaactagaagcaacagagactttcgt
ctaactttgcctcattatgaaagagataaatcacaaactcaaacagtgcattctagtgat
tttttcaacttagacttttcatacaacagtagtcccaatccaaatttaaacatcatttat
ccacatggactggttccctataacagtactggaaacgacgatagcactacaacatctggt
agctatgttcttgatccggaagaagaaatcaacgagatcattcaaccaagcaacagatgc
attgtttga
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integrated database retrieval system