Ostrea edulis (European flat oyster): 125679101
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Entry
125679101 CDS
T09123
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125679101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oed03036
]
125679101
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
125679101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
125679101
NCBI-ProteinID:
XP_048774005
LinkDB
All DBs
Position
2:22530309..22558498
Genome browser
AA seq
1310 aa
AA seq
DB search
MSSSEESEDDNWGLPTPSSGPKMERCLLGKTEFLLPESMLEQSHVFRDVLSMDTWKNVLT
EEQRTHLNALLPTFPSNDTTEKEECLQKLFGNENFKFGNPLSQLQTKMRDGFCSPDIAKY
SSLCRNIKYREYQHRQQRYYSNLLKDILLSRQKAYENIQKVPPGGRLEFTHNPSANTKRS
SVEHRSKKKYVRLMKEVRQECGMEDTSSEEEDTTVSAQRMKKQLFKSVYPLPSPDPTIPS
VVHTFSSKPLLVNGDITVSSDGQQVKRPRPFSPVEVTEEDYRNLLRNHKRKKLSTEEDHP
DLNTDSITLQDVMSRCQATNRTSPNESSKIVSPDSNVSASRKKTLKLKDKTEKKLKKVLK
IKKEGLDYSAQPLMYSEEESLSPINLDIKEEPLPDLFQQDNALPKIPASFGLFTNYFSLL
RDVVIEFDDGKATTAKLEEKVREWQESSSAPKNVWFSLVPNWVDCVLQALKFLAGDLIDV
SPPNFVPYVDYKERAQQWRWIGAGRDSDDNMTALFKHFITSRKDGNCDLYDGGAGSTPPP
RSKTGYVVKATTDEEKVQFREQEARRFMTPHKAFTYRMHDYESVVGPVKGVYTKDNSNNK
AREHALLVSNRPSFVTILTLVRDSAARLPNGEGTRGDICELLKDSQFLAPGVSDAQINVV
VSGALDRLHSEKDPCVKYDVNRKLWIYLHRNRSEEEFEKIHQAHGAAQKAKKSLQKPKTQ
KSGKVKDTSVSLSTSVSSPSLKSALSSDTLGIDDSMSVTPASPSVAQSPRSSNSPLVGQV
SPRGLSNSSPRSTANQATIAALKNAVSAGTVPGSQGNILHSQSAATIRLHLQQQQQQLQQ
KASSVSSTPHKSTAKPESPTVTIGSTRSDTPQGLPQSVPLGLLQSLRTASPNVTQSITSA
LRQELLAQRQNSGSPAPSPVISSTAINKVTEKVTMAATPTSTMATTPSAQLVTRLVQQVS
GNQMVNVSNLLAAQRVQGPRGNVPTTLKIQGGNLLQPVGGGKPLHLAGKPLTQARGQLVQ
ITGKGAQQLIQTPQGALPISIIPQGGGAAGVMTLGQPRTPPVPSDSGATSSPNIQTITRT
SQGNPAIITSQSKVVTPSQGGIVVTQLPPGLTIRPGSIPVSSHCKMVSGGQAGGQAGLLS
QIIMQSSGVLTGTSSSHAQSIAGGVPLLVSGAGGKPGQNIQVVRTVLGQQANLKPGQATI
LISQPTLQSNANVIHTGQLIQSSAKSKAGPGKTPPVYARIITPPPGQKSAPGTNSPQPPG
AVSVLQTVNKFISVANASATTVSPASSPVTKATTDTTQTITLEMPSDGNS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcagtgaggagagtgaggatgacaactgggggttacctaccccctcctcagga
cccaagatggaaaggtgtcttcttggcaagacagagttcctcttaccggagtccatgcta
gaacagagtcatgtctttcgggatgtgttgagtatggacacctggaaaaatgttttaaca
gaagagcagaggacacatttaaatgccttgctgccaacttttccttccaatgatacaaca
gagaaagaagaatgtctccagaaattatttggaaatgaaaatttcaagtttggaaatcct
ctgtctcaacttcagacaaaaatgagagatggattttgttcaccagacattgccaagtat
tccagcttatgtcgaaacatcaagtatcgggaatatcaacacagacagcaaagatactac
tccaacttgctgaaagacatactgctgtccaggcagaaggcgtatgaaaatattcagaaa
gtgccacctggtggaaggttggaatttacccacaatccttcagccaatacaaaacggagc
tctgtggagcacaggtccaagaagaaatatgtcaggttgatgaaggaagtgaggcaggaa
tgcggaatggaggatacatcctcggaggaagaagacactacagtgtcagctcagaggatg
aagaagcagctcttcaagtcggtgtaccccctcccctcccctgaccccaccattcccagc
gtggtccacactttctcctccaaaccgctgttggtcaatggggatattacagtaagtagt
gatggacagcaggtaaagcgaccacgaccattcagcccggtggaggtgacggaagaagat
tatagaaatctgctgaggaaccacaagaggaagaaactgtcgacagaggaggatcatccc
gacctaaatacggactctatcactcttcaagatgtcatgtcacgatgccaggctaccaac
agaaccagtccaaatgagtccagtaagatagtgtcccccgattccaatgtgtcagcgagt
aggaagaagacactcaaactgaaagacaagacggagaaaaaactgaagaaagtgctgaag
atcaagaaggaagggctggactactccgctcaacctcttatgtatagtgaggaggaatcg
ctgagccccattaacctggacatcaaagaggaacccctcccggacttatttcaacaggat
aatgctctaccaaagattcctgcttcctttggtttattcacaaactacttcagtttgctc
cgtgatgtggttatagaatttgacgatggaaaggcaaccacagctaagcttgaagagaaa
gttcgagagtggcaagagtcgagttctgcaccaaaaaatgtgtggttctcactggtccct
aactgggtggactgtgtccttcaggccctgaaattcttggctggagatctcatagatgta
tcgcctccaaactttgtgccctatgtagactataaagagcgggcccagcagtggcgatgg
attggggccgggcgggattcagatgacaatatgaccgcccttttcaaacactttatcacg
agtcgtaaagatggaaattgtgatctctatgacgggggagcaggctccaccccaccacca
cggagtaaaacgggttatgttgtgaaggctactacagatgaagaaaaggttcaatttaga
gaacaggaggcccgtagattcatgaccccccacaaagccttcacctacaggatgcatgat
tatgagtcagtggttgggccagtcaagggggtgtacaccaaagacaactccaacaacaag
gcccgagaacatgcgttacttgtgtccaacagaccgtcatttgttaccattctcactctg
gtaagagactcagcagcaagactgccaaatggggaaggaactcgcggggatatttgtgag
cttctgaaagactctcagtttttagccccaggtgtttcagatgcccagataaatgtggtg
gtcagtggtgccctagacagattacattcagagaaagatccctgtgtgaagtacgacgtc
aaccgcaaactctggatttacctccaccggaaccgatcagaagaggaatttgagaaaatt
catcaggcccatggagcagcacagaaagccaaaaagtcattacagaaaccaaagacacaa
aaatctggcaaagtaaaggacacttcagtgagcctgtctacctcagtatcgagtccaagt
cttaaatcggccctgagctcagatacactgggtatagacgacagcatgtcggtcactcca
gcgagtccatctgtggctcagagtccaagatcaagtaacagtcccttagtgggtcaggtg
agcccaagaggtctgtctaacagcagtcccaggtcaacggctaaccaggcaacaatagca
gccctgaagaatgcggtcagtgcaggcactgttcctgggtcccagggcaatatcctccac
tctcagtcagctgccaccatccgtcttcatttgcagcagcagcaacaacagcttcagcag
aaagctagttctgtatccagcacaccccataaatctacagctaaaccggagtcccccacg
gtaaccataggatctactcgtagtgacaccccacaaggattaccccagtcagtccctcta
ggacttctccagagtctgcgaacagccagtccaaatgtcacccagagcataaccagtgct
ctgcgtcaggaattactggcacagcgccaaaattcaggcagccctgcgccctcccctgtc
atcagctctacagcgatcaataaagtaacagagaaggtcacaatggctgccacacccacc
agtaccatggcgaccacgcctagtgctcagctggtcacacgtctggtccagcaggtgtcg
ggaaatcagatggtgaatgtcagcaatttactggctgcccagagggttcaggggccgcga
gggaatgtccccaccactctgaagatccagggaggtaacttgctgcagcctgtgggagga
ggtaaacctctccacttggcaggaaaacccctcactcaggctcggggtcagctggtgcag
attacagggaaaggggctcagcagctgatacagactcctcaaggtgccttacccatcagc
atcatcccacaaggaggtggagctgctggggtcatgaccctaggtcaaccaaggacacca
ccagttccttcagattcaggggcgaccagcagtcctaacatacaaacaatcacccgcact
tctcagggaaatccagccattatcacttcacaatccaaagtcgttaccccctcacaagga
ggcattgtggtaacacagctgccccctggactgactattcgcccaggcagcattcctgtg
tcctctcactgcaagatggtgagcgggggacaggctgggggacaggctggactgctgtca
cagatcatcatgcagtcctctggagttctcaccggtaccagctcctcacatgctcagagt
attgctggtggtgttccgttgctggttagtggtgctggcgggaaaccaggacagaacatc
caggtggtgcggacagtactgggtcaacaggccaatttaaaacccggacaggccaccatt
ctcatatcccaacccactctacaatcaaacgctaatgtgattcatacaggacaattaatc
caaagttctgccaaatccaaagcaggcccaggcaaaactccgcccgtttatgcaagaata
attacacctcccccaggacagaagtctgccccggggaccaactctccgcagcccccagga
gctgtcagtgtacttcagacagtcaataaatttatctctgtcgcaaatgcatcagccacc
actgtctcacctgcctcatctcctgttaccaaggcaacaacagacacgacacaaaccata
accttagaaatgccatcggatggaaactcatga
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