Ostrea edulis (European flat oyster): 125679132
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Entry
125679132 CDS
T09123
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit-like isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125679132
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oed01007
]
125679132
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125679132
Enzymes [BR:
oed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125679132
Amino acid related enzymes [BR:
oed01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125679132
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125679132
Prokaryotic type
125679132
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
125679132
NCBI-ProteinID:
XP_056018222
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All DBs
Position
1:81157571..81170695
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AA seq
584 aa
AA seq
DB search
MPTISVNKEELFKALGKRYTFEEFDELCFEFGVEPEEPDEDDIIENPDAALEWKIEIGAN
RYDLLCIEGLVRGLLVFLERVEAPRYKTIPPWPGKTQRLRILPRTAEVRPFAVAAVLRNI
TFTPEIYKSFIDLQDKLHQNLCRRRTLVAIGTHDLDTLKGPFYYDAKPPSEIKFKALNQT
EEKTAAELMEIYSNESHLKQYLPIIQDKPVYPVIYDSNGVVLSMPPIINGDHSKITLNTK
NVFIECTATDLNKATITLDTIVTMFSQYCSPPYEGIESAEVVNPCGTSVMYPELHYRLEE
IDVSDTNCKIGICIPPGEMARLLTKMCLESTPFDSGNKIMVEIPPTRHDVIHACDIVEDV
AIAYGYNNIVKTIPQTNCIGNQYPINKLSDLLRQEIAAAGFTEVLSFALCSRDDVADKLG
KNIKDIKAVHIANPKTLEFQVARTTLLPGILKTINKNKSMPLPLKLFEISDIVLCDSAKD
VGAKNERWLCAVNYNKSSGFEIVKGLLDRVMQLLEIPAERGKTGYYIEACDDPTYFQGRC
ATVILRGKAIGKIGVLHPDVVTKFDINNPCSAFEISVEPLLNRT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaatatctgtaaataaggaggaattgtttaaagcgctcgggaaacgttacact
tttgaagaatttgatgaactttgctttgaatttggagtagaaccagaggaaccggatgaa
gatgacataatagaaaacccagatgctgctttagaatggaaaatagaaattggtgcaaat
aggtatgatttgctgtgcattgagggtttggtcaggggtttgctggtattcctagaaaga
gttgaagctccaagatacaaaactatccctccatggcctggtaaaacgcagagacttaga
attttaccaagaactgcggaagtaagaccgtttgcagtagcagctgttttaagaaacatc
acttttactccagagatatacaaaagtttcattgaccttcaagacaaacttcaccagaat
ctctgcaggaggagaacgttagtagcgataggaacacatgacttggatacgcttaaagga
cctttctattacgatgccaaaccaccctcagagatcaagtttaaagctctgaatcagaca
gaggaaaagacagcagctgagctgatggaaatctattctaatgagagtcacttgaagcag
tacctacccattattcaggacaaaccagtgtaccccgttatctatgacagcaatggtgta
gtactatccatgcctccaattataaatggggaccatagtaagataacactcaacacaaag
aatgtcttcattgaatgcacagccaccgacctcaacaaagccacgattacactggacaca
attgtcaccatgtttagccagtactgctccccaccttacgaaggaattgagtcagcagaa
gttgtgaatccatgcggaaccagtgtaatgtatcccgagcttcactacagactagaagaa
attgatgtgtcagatacaaactgcaagataggaatatgcattcctcctggtgaaatggcc
agactgttgaccaaaatgtgcctggaatctaccccttttgacagtggaaacaaaataatg
gtagagataccccccaccaggcatgatgtgattcatgcctgtgatattgtggaggatgtg
gccattgcctatggttacaacaatatagtgaaaacaattccacaaaccaactgtattggg
aaccagtatcctatcaacaaattgtcagacttactacgacaagagatagcagcagccggt
tttacagaagtactctcatttgcactgtgctcacgagatgatgtggcagacaaattgggc
aaaaatatcaaagatataaaagcagtacatattgccaatccaaaaacactggaatttcag
gttgccaggacaacattgcttccgggaatacttaaaaccataaataaaaataagagcatg
ccattacctctgaagttgtttgaaatttctgacattgttctgtgtgattctgccaaggat
gttggagccaaaaacgagaggtggctgtgtgcagtgaactataacaaatcctcggggttt
gaaattgtgaagggcctcttggacagggtcatgcagcttctggaaatcccagcagagaga
ggaaaaacgggctactacattgaagcctgtgatgatccgacatatttccaaggacgatgt
gccacagtcatattacgagggaaggccattgggaaaattggagtgctgcatcctgatgtt
gtgacaaagtttgacataaacaacccctgttcagcttttgaaatatcagttgaaccgttg
ttaaacagaacatga
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