Ostrea edulis (European flat oyster): 125679239
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Entry
125679239 CDS
T09123
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04080
Neuroactive ligand-receptor interaction
oed04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125679239
04082 Neuroactive ligand signaling
125679239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oed04040
]
125679239
Ion channels [BR:
oed04040
]
Ligand-gated channels
GABA-A
125679239
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF3908
Motif
Other DBs
NCBI-GeneID:
125679239
NCBI-ProteinID:
XP_048774243
LinkDB
All DBs
Position
2:61233870..61249204
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AA seq
464 aa
AA seq
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MNNMKLICLFLVVSFVKISMECRHGQQYISNVSRCEEKKNHMSHISAANITSTLDDVLDP
RKYDRKLRPGFKGKPVEIYTDMLLRSMGPISEKDMVYSIEIYFRQRWMDARLATNMSIEN
ISLNIKVLERLWYPDTVFYNGRKSRLHYIPTTNRFIRISPNGSMYLSQRLTVRAICQMEL
QNYPLDYQVCDLQIGSFAYSTEDVTYVWRYGPSNSVQLSTDMSMSQFDLINYSATSSNIS
RKDVVYSCLTVRFGLRRHAGYFLIHIVIPCSLLVVLSWVSFWINREATADRIALGTTTVL
TMTFLALDTRDELPRVSYATALDLYVAMCFIFVLSTLVQFAIVHLFTKRGHNDTYPQVKM
ATLDDDEKAPSSRKLQPRTTRRIACIEQNIHKNRVFVSKVESRMKVWFSSLKFKDDPFQE
QGHEIQTNSVSQIDKVCRFIFPITFVILNIAYWSFFLTRNGFKI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatgaagctgatatgtctgttcttggtagtaagttttgtcaagatttcaatg
gaatgtagacatgggcagcagtatatatccaatgtatccagatgcgaagaaaagaaaaat
catatgagccacatcagtgccgctaacattacgtcaacacttgatgacgtgttggatccg
aggaaatacgaccggaagttgagaccaggatttaaaggaaaaccagtggaaatttataca
gacatgcttctgagatcaatgggacctatttcggaaaaagacatggtttactctatagag
atatactttcggcagaggtggatggacgcaagactcgccactaatatgtctattgaaaac
atttccttgaacatcaaagtcctggagagattatggtaccccgacacagtcttctacaac
ggcaggaagtcccgccttcactacataccgacgacaaaccgtttcataaggattagtcca
aatggttccatgtatctatcacaaaggttgaccgtcagagccatttgtcaaatggaactt
cagaactaccctctagactaccaagtatgtgacctccagataggaagctttgcttattca
acggaggatgtgacgtatgtctggcgttatggtccatcgaattcagtgcagttgtcgaca
gacatgagcatgtctcagttcgacctcatcaattactcggccacgtcttctaatatatcc
agaaaagatgtggtgtattcttgtctgacggttcgctttggtctccgaagacacgccgga
tatttcctcatccacatcgtcattccatgttcattattggttgtactgtcctgggtctcg
ttttggattaacagagaggccacggcagatagaattgctcttggcacaaccacagtgtta
accatgaccttccttgcccttgacaccagagatgaactgccgcgtgtttcctatgccact
gccctcgacctttatgtcgcaatgtgctttatcttcgtattgtctactcttgtccaattt
gccattgttcaccttttcaccaagaggggtcataatgatacttatccccaggtcaagatg
gcgaccttggacgacgatgaaaaagcaccttcctctaggaaacttcaacccagaaccacc
agacggatagcatgcatcgagcagaatattcacaagaacagggtatttgtgtcaaaagtg
gaaagtcgtatgaaggtctggttctctagcttaaagttcaaagatgacccttttcaagaa
caaggtcacgagatccagactaacagcgtgagccaaattgacaaggtgtgccgattcata
ttccctatcacatttgtaattctcaacattgcatactggtcattctttttgaccagaaat
gggtttaaaatataa
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